FFCP PHASE1:Hg19::chr14:74960446..74960479,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122961 | |EntrezGene=122961 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19857 | |HGNC=19857 | ||
|TSSclassifier=strong | |||
|UniProt=Q86U28,G3V291 | |UniProt=Q86U28,G3V291 | ||
|association_with_transcript=0bp_to_ENST00000298818,ENST00000554924,ENST00000555139,NM_194279,uc001xpz.2_5end | |association_with_transcript=0bp_to_ENST00000298818,ENST00000554924,ENST00000555139,NM_194279,uc001xpz.2_5end | ||
|cluster_id=chr14:74960446..74960479,+ | |||
|description=CAGE_peak_1_at_ISCA2_5end | |description=CAGE_peak_1_at_ISCA2_5end | ||
|id=chr14:74960446..74960479,+ | |id=chr14:74960446..74960479,+ | ||
|ontology_enrichment_celltype=CL:1000449!3.06e-08!16;CL:0002681!2.80e-07!13;CL:0002584!2.80e-07!13 | |ontology_enrichment_celltype=CL:1000449!3.06e-08!16;CL:0002681!2.80e-07!13;CL:0002584!2.80e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000449;6.85e-08;15!CL:0002681;5.72e-07;12!CL:0002584;5.72e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,6.04e-08,15;CL:0002681,5.45e-07,12;CL:0002584,5.45e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.44e-09!347;UBERON:0000119!3.64e-09!312;UBERON:0000483!6.61e-09!309;UBERON:0000080!1.52e-08!18;UBERON:0002120!1.52e-08!18;UBERON:0004875!1.52e-08!18;UBERON:0005721!1.52e-08!18;UBERON:0005754!1.52e-08!18;UBERON:0007297!1.52e-08!18;UBERON:0006555!1.80e-08!17;UBERON:0005103!1.80e-08!17;UBERON:0000083!1.80e-08!17;UBERON:0009201!1.80e-08!17;UBERON:0004819!1.80e-08!17;UBERON:0006553!1.80e-08!17;UBERON:0003074!1.80e-08!17;UBERON:0003060!1.80e-08!17;UBERON:0000064!2.41e-08!219;UBERON:0004211!3.06e-08!16;UBERON:0001285!3.06e-08!16;UBERON:0007684!3.06e-08!16;UBERON:0003220!3.06e-08!16;UBERON:0004208!3.06e-08!16;UBERON:0000058!4.57e-08!26;UBERON:0001225!2.80e-07!13;UBERON:0008987!2.80e-07!13;UBERON:0001851!2.86e-07!16;UBERON:0004876!3.70e-07!20;UBERON:0000353!7.26e-07!17;UBERON:0005177!8.14e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.85e-08;15!UBERON:0004819;6.85e-08;15!UBERON:0001285;6.85e-08;15!UBERON:0007684;6.85e-08;15!UBERON:0001851;5.56e-07;15!UBERON:0001225;5.72e-07;12!UBERON:0008987;5.72e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,3.04e-09,309;UBERON:0000483,5.53e-09,306;UBERON:0006555,3.57e-08,16;UBERON:0004819,3.57e-08,16;UBERON:0004211,6.04e-08,15;UBERON:0009773,6.04e-08,15;UBERON:0001231,6.04e-08,15;UBERON:0001285,6.04e-08,15;UBERON:0007684,6.04e-08,15;UBERON:0004208,6.04e-08,15;UBERON:0001225,5.45e-07,12;UBERON:0008987,5.45e-07,12;UBERON:0001851,5.74e-07,15;UBERON:0006554,7.42e-07,47;UBERON:0000353,9.03e-07,15 | |||
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| ||
|short_description=p1@ISCA2 | |short_description=p1@ISCA2 | ||
}} | }} |
Latest revision as of 00:53, 16 September 2015
Short description: | p1@ISCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ISCA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000298818, ENST00000554924, ENST00000555139, NM_194279, uc001xpz.2_5end |
EntrezGene: | ISCA2 |
HGNC: | 19857 |
UniProt: | Q86U28G3V291 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 6.04e-08 | 15 |
kidney cortical cell | 5.45e-07 | 12 |
renal cortical epithelial cell | 5.45e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell layer | 3.04e-09 | 309 |
epithelium | 5.53e-09 | 306 |
excretory tube | 3.57e-08 | 16 |
kidney epithelium | 3.57e-08 | 16 |
nephron epithelium | 6.04e-08 | 15 |
renal tubule | 6.04e-08 | 15 |
nephron tubule | 6.04e-08 | 15 |
nephron | 6.04e-08 | 15 |
uriniferous tubule | 6.04e-08 | 15 |
nephrogenic mesenchyme | 6.04e-08 | 15 |
cortex of kidney | 5.45e-07 | 12 |
renal parenchyma | 5.45e-07 | 12 |
cortex | 5.74e-07 | 15 |
urinary system structure | 7.42e-07 | 47 |
parenchyma | 9.03e-07 | 15 |