FFCP PHASE1:Hg19::chr16:28857613..28857627,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7284 | |EntrezGene=7284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12420 | |HGNC=12420 | ||
|TSSclassifier=strong | |||
|UniProt=P49411 | |UniProt=P49411 | ||
|association_with_transcript=101bp_to_ENST00000313511,NM_003321,uc002drh.2_5end | |association_with_transcript=101bp_to_ENST00000313511,NM_003321,uc002drh.2_5end | ||
|cluster_id=chr16:28857613..28857627,- | |||
|coexpression_cluster_id=C1419 | |coexpression_cluster_id=C1419 | ||
|description=CAGE_peak_3_at_TUFM_5end | |description=CAGE_peak_3_at_TUFM_5end | ||
|id=chr16:28857613..28857627,- | |id=chr16:28857613..28857627,- | ||
|ontology_enrichment_celltype=CL:0000066!2.58e-23!254;CL:0002321!1.47e-21!248;CL:0000220!2.96e-21!246;CL:0000222!3.35e-11!119;CL:0002078!1.28e-07!44;CL:1000449!2.07e-07!16;CL:0000115!3.00e-07!35;CL:0000223!3.65e-07!59;CL:0000071!3.82e-07!18;CL:0002546!3.82e-07!18;CL:0000076!6.02e-07!62 | |ontology_enrichment_celltype=CL:0000066!2.58e-23!254;CL:0002321!1.47e-21!248;CL:0000220!2.96e-21!246;CL:0000222!3.35e-11!119;CL:0002078!1.28e-07!44;CL:1000449!2.07e-07!16;CL:0000115!3.00e-07!35;CL:0000223!3.65e-07!59;CL:0000071!3.82e-07!18;CL:0002546!3.82e-07!18;CL:0000076!6.02e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:1000449;8.05e-08;15!CL:0000071;4.01e-07;18!CL:0002681;7.54e-07;12!CL:0002584;7.54e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.26e-23,253;CL:0002321,7.02e-22,250;CL:0000222,1.89e-11,121;CL:0002078,5.56e-08,45;CL:1000449,8.50e-08,15;CL:0000115,1.26e-07,36;CL:0000071,3.82e-07,18;CL:0002546,3.82e-07,18;CL:0000076,4.59e-07,63;CL:0000223,4.78e-07,58;CL:0002681,7.94e-07,12;CL:0002584,7.94e-07,12;CL:0000213,8.79e-07,58;CL:0000215,8.79e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;4.01e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.52e-18!312;UBERON:0000483!1.87e-18!309;UBERON:0000481!2.31e-17!347;UBERON:0003104!2.60e-17!238;UBERON:0009142!2.60e-17!238;UBERON:0002100!3.77e-14!216;UBERON:0003914!3.49e-13!118;UBERON:0000475!2.90e-12!365;UBERON:0000477!1.02e-11!286;UBERON:0000490!2.98e-11!138;UBERON:0009569!3.51e-11!113;UBERON:0005256!4.05e-11!143;UBERON:0004111!5.55e-11!241;UBERON:0000025!1.88e-10!194;UBERON:0005177!6.46e-09!107;UBERON:0008947!1.24e-08!38;UBERON:0003258!1.24e-08!38;UBERON:0000064!1.39e-08!219;UBERON:0000072!1.48e-08!46;UBERON:0001041!1.52e-08!98;UBERON:0000486!1.72e-08!82;UBERON:0003103!3.66e-08!69;UBERON:0000063!4.16e-08!97;UBERON:0004290!6.46e-08!70;UBERON:0004921!8.01e-08!129;UBERON:0004185!8.01e-08!129;UBERON:0000065!9.82e-08!53;UBERON:0000055!1.24e-07!69;UBERON:0001048!1.48e-07!168;UBERON:0000487!1.67e-07!22;UBERON:0000922!1.90e-07!612;UBERON:0000915!2.05e-07!52;UBERON:0004211!2.07e-07!16;UBERON:0001285!2.07e-07!16;UBERON:0007684!2.07e-07!16;UBERON:0003220!2.07e-07!16;UBERON:0004208!2.07e-07!16;UBERON:0004119!2.10e-07!169;UBERON:0000925!2.10e-07!169;UBERON:0006595!2.10e-07!169;UBERON:0000923!3.65e-07!604;UBERON:0005291!3.65e-07!604;UBERON:0006598!3.65e-07!604;UBERON:0002532!3.65e-07!604;UBERON:0001986!3.82e-07!18;UBERON:0004638!3.82e-07!18;UBERON:0004852!3.82e-07!18;UBERON:0001981!3.90e-07!60;UBERON:0007500!3.90e-07!60;UBERON:0004537!3.90e-07!60;UBERON:0006965!3.90e-07!60;UBERON:0001004!3.95e-07!72;UBERON:0002050!4.97e-07!605;UBERON:0005423!4.97e-07!605;UBERON:0000914!5.23e-07!83;UBERON:0002329!5.23e-07!83;UBERON:0003077!5.23e-07!83;UBERON:0003059!5.23e-07!83;UBERON:0007282!5.23e-07!83;UBERON:0009618!5.23e-07!83;UBERON:0007285!5.23e-07!83;UBERON:0004872!5.43e-07!84;UBERON:0006914!5.50e-07!25;UBERON:0002049!5.87e-07!79;UBERON:0007798!5.87e-07!79;UBERON:0000466!7.90e-07!126 | |ontology_enrichment_uberon=UBERON:0000119!1.52e-18!312;UBERON:0000483!1.87e-18!309;UBERON:0000481!2.31e-17!347;UBERON:0003104!2.60e-17!238;UBERON:0009142!2.60e-17!238;UBERON:0002100!3.77e-14!216;UBERON:0003914!3.49e-13!118;UBERON:0000475!2.90e-12!365;UBERON:0000477!1.02e-11!286;UBERON:0000490!2.98e-11!138;UBERON:0009569!3.51e-11!113;UBERON:0005256!4.05e-11!143;UBERON:0004111!5.55e-11!241;UBERON:0000025!1.88e-10!194;UBERON:0005177!6.46e-09!107;UBERON:0008947!1.24e-08!38;UBERON:0003258!1.24e-08!38;UBERON:0000064!1.39e-08!219;UBERON:0000072!1.48e-08!46;UBERON:0001041!1.52e-08!98;UBERON:0000486!1.72e-08!82;UBERON:0003103!3.66e-08!69;UBERON:0000063!4.16e-08!97;UBERON:0004290!6.46e-08!70;UBERON:0004921!8.01e-08!129;UBERON:0004185!8.01e-08!129;UBERON:0000065!9.82e-08!53;UBERON:0000055!1.24e-07!69;UBERON:0001048!1.48e-07!168;UBERON:0000487!1.67e-07!22;UBERON:0000922!1.90e-07!612;UBERON:0000915!2.05e-07!52;UBERON:0004211!2.07e-07!16;UBERON:0001285!2.07e-07!16;UBERON:0007684!2.07e-07!16;UBERON:0003220!2.07e-07!16;UBERON:0004208!2.07e-07!16;UBERON:0004119!2.10e-07!169;UBERON:0000925!2.10e-07!169;UBERON:0006595!2.10e-07!169;UBERON:0000923!3.65e-07!604;UBERON:0005291!3.65e-07!604;UBERON:0006598!3.65e-07!604;UBERON:0002532!3.65e-07!604;UBERON:0001986!3.82e-07!18;UBERON:0004638!3.82e-07!18;UBERON:0004852!3.82e-07!18;UBERON:0001981!3.90e-07!60;UBERON:0007500!3.90e-07!60;UBERON:0004537!3.90e-07!60;UBERON:0006965!3.90e-07!60;UBERON:0001004!3.95e-07!72;UBERON:0002050!4.97e-07!605;UBERON:0005423!4.97e-07!605;UBERON:0000914!5.23e-07!83;UBERON:0002329!5.23e-07!83;UBERON:0003077!5.23e-07!83;UBERON:0003059!5.23e-07!83;UBERON:0007282!5.23e-07!83;UBERON:0009618!5.23e-07!83;UBERON:0007285!5.23e-07!83;UBERON:0004872!5.43e-07!84;UBERON:0006914!5.50e-07!25;UBERON:0002049!5.87e-07!79;UBERON:0007798!5.87e-07!79;UBERON:0000466!7.90e-07!126 | ||
|ontology_enrichment_uberon_v019=UBERON:0000072;5.64e-09;37!UBERON:0006555;8.05e-08;15!UBERON:0004819;8.05e-08;15!UBERON:0001285;8.05e-08;15!UBERON:0007684;8.05e-08;15!UBERON:0000490;1.29e-07;33!UBERON:0000487;1.96e-07;22!UBERON:0000353;2.98e-07;15!UBERON:0004638;4.01e-07;18!UBERON:0001986;4.01e-07;18!UBERON:0004852;4.01e-07;18!UBERON:0000065;5.46e-07;44!UBERON:0006914;6.38e-07;25!UBERON:0003914;7.46e-07;74!UBERON:0001225;7.54e-07;12!UBERON:0008987;7.54e-07;12 | |||
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| ||
|short_description=p3@TUFM | |short_description=p3@TUFM | ||
}} | }} |
Latest revision as of 01:15, 16 September 2015
Short description: | p3@TUFM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TUFM_5end |
Coexpression cluster: | C1419_Mesenchymal_Alveolar_Renal_Bronchial_Keratocytes_Trabecular_Pericytes |
Association with transcript: | 101bp_to_ENST00000313511, NM_003321, uc002drh.2_5end |
EntrezGene: | TUFM |
HGNC: | 12420 |
UniProt: | P49411 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.26e-23 | 253 |
embryonic cell | 7.02e-22 | 250 |
mesodermal cell | 1.89e-11 | 121 |
meso-epithelial cell | 5.56e-08 | 45 |
epithelial cell of nephron | 8.50e-08 | 15 |
endothelial cell | 1.26e-07 | 36 |
blood vessel endothelial cell | 3.82e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.82e-07 | 18 |
squamous epithelial cell | 4.59e-07 | 63 |
endodermal cell | 4.78e-07 | 58 |
kidney cortical cell | 7.94e-07 | 12 |
renal cortical epithelial cell | 7.94e-07 | 12 |
lining cell | 8.79e-07 | 58 |
barrier cell | 8.79e-07 | 58 |