FFCP PHASE1:Hg19::chr12:106632425..106632429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10970 | |EntrezGene=10970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16991 | |HGNC=16991 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=389bp_to_BC015436_5end | |association_with_transcript=389bp_to_BC015436_5end | ||
|cluster_id=chr12:106632425..106632429,- | |||
|description=CAGE_peak_11_at_CKAP4_5end | |description=CAGE_peak_11_at_CKAP4_5end | ||
|id=chr12:106632425..106632429,- | |id=chr12:106632425..106632429,- | ||
|ontology_enrichment_celltype=CL:0000055!1.06e-20!180;CL:0000222!2.13e-12!119;CL:0000548!1.40e-11!679;CL:0000004!1.40e-11!679;CL:0000255!1.40e-11!679;CL:0000012!5.72e-11!682;CL:0000144!6.32e-11!625;CL:0000680!7.47e-11!57;CL:0000056!7.47e-11!57;CL:0000355!7.47e-11!57;CL:0000183!2.56e-10!59;CL:0000192!2.99e-10!42;CL:0000514!2.99e-10!42;CL:0000057!3.24e-10!75;CL:0000359!3.61e-10!32;CL:0000187!1.74e-09!54;CL:0000220!2.45e-09!246;CL:0002321!2.46e-09!248;CL:0002371!2.87e-09!591;CL:0000393!3.18e-09!60;CL:0000211!3.18e-09!60 | |ontology_enrichment_celltype=CL:0000055!1.06e-20!180;CL:0000222!2.13e-12!119;CL:0000548!1.40e-11!679;CL:0000004!1.40e-11!679;CL:0000255!1.40e-11!679;CL:0000012!5.72e-11!682;CL:0000144!6.32e-11!625;CL:0000680!7.47e-11!57;CL:0000056!7.47e-11!57;CL:0000355!7.47e-11!57;CL:0000183!2.56e-10!59;CL:0000192!2.99e-10!42;CL:0000514!2.99e-10!42;CL:0000057!3.24e-10!75;CL:0000359!3.61e-10!32;CL:0000187!1.74e-09!54;CL:0000220!2.45e-09!246;CL:0002321!2.46e-09!248;CL:0002371!2.87e-09!591;CL:0000393!3.18e-09!60;CL:0000211!3.18e-09!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.29e-10;32!CL:0000192;3.59e-08;43!CL:0002539;4.08e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.58e-11,43;CL:0000514,1.58e-11,43;CL:0000359,4.25e-11,32;CL:0000680,5.46e-11,58;CL:0000056,5.46e-11,58;CL:0000355,5.46e-11,58;CL:0000048,5.29e-10,427;CL:0000723,1.50e-09,433;CL:0000034,5.67e-09,441;CL:0000187,1.12e-08,55;CL:0000057,1.22e-08,76;CL:0000393,2.85e-07,61;CL:0000211,2.85e-07,61;CL:0002539,4.10e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.59e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.25e-12!79;UBERON:0007798!1.25e-12!79;UBERON:0000055!9.27e-12!69;UBERON:0001637!1.17e-11!42;UBERON:0003509!1.17e-11!42;UBERON:0004572!1.17e-11!42;UBERON:0001981!1.86e-11!60;UBERON:0007500!1.86e-11!60;UBERON:0004537!1.86e-11!60;UBERON:0006965!1.86e-11!60;UBERON:0004290!1.08e-10!70;UBERON:0000486!1.12e-10!82;UBERON:0004872!1.62e-10!84;UBERON:0000914!3.28e-10!83;UBERON:0002329!3.28e-10!83;UBERON:0003077!3.28e-10!83;UBERON:0003059!3.28e-10!83;UBERON:0007282!3.28e-10!83;UBERON:0009618!3.28e-10!83;UBERON:0007285!3.28e-10!83;UBERON:0001134!1.08e-09!61;UBERON:0002036!1.08e-09!61;UBERON:0003082!1.08e-09!61;UBERON:0002385!2.22e-09!63;UBERON:0001015!2.22e-09!63;UBERON:0000383!2.22e-09!63;UBERON:0005256!3.72e-09!143;UBERON:0003914!8.69e-09!118;UBERON:0004573!9.22e-09!33;UBERON:0004571!9.22e-09!33;UBERON:0000490!2.58e-08!138;UBERON:0004535!9.34e-08!110;UBERON:0000947!1.73e-07!21;UBERON:0010191!1.73e-07!21;UBERON:0001009!2.66e-07!113;UBERON:0002100!3.33e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.85e-11;42!UBERON:0003509;6.85e-11;42!UBERON:0004572;6.85e-11;42!UBERON:0004573;9.93e-11;33!UBERON:0004571;9.93e-11;33!UBERON:0001135;2.81e-07;15!UBERON:0000947;3.31e-07;21!UBERON:0010191;3.31e-07;21!UBERON:0004237;4.08e-07;10!UBERON:0004695;4.08e-07;10!UBERON:0002111;4.08e-07;10!UBERON:0004178;4.08e-07;10!UBERON:0002385;6.18e-07;31!UBERON:0001015;6.18e-07;31!UBERON:0000383;6.18e-07;31 | |||
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| ||
|short_description=p11@CKAP4 | |short_description=p11@CKAP4 | ||
}} | }} |
Latest revision as of 02:17, 16 September 2015
Short description: | p11@CKAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CKAP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 389bp_to_BC015436_5end |
EntrezGene: | CKAP4 |
HGNC: | 16991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.58e-11 | 43 |
smooth muscle myoblast | 1.58e-11 | 43 |
vascular associated smooth muscle cell | 4.25e-11 | 32 |
muscle precursor cell | 5.46e-11 | 58 |
myoblast | 5.46e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.46e-11 | 58 |
multi fate stem cell | 5.29e-10 | 427 |
somatic stem cell | 1.50e-09 | 433 |
stem cell | 5.67e-09 | 441 |
muscle cell | 1.12e-08 | 55 |
fibroblast | 1.22e-08 | 76 |
electrically responsive cell | 2.85e-07 | 61 |
electrically active cell | 2.85e-07 | 61 |
aortic smooth muscle cell | 4.10e-07 | 10 |