FFCP PHASE1:Hg19::chr12:106976678..106976708,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5992 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9985 | |||
|TSSclassifier=strong | |||
|UniProt=Q33E94 | |||
|association_with_transcript=0bp_to_ENST00000392842,NM_213594_5end | |||
|cluster_id=chr12:106976678..106976708,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_RFX4_5end | |||
|id=chr12:106976678..106976708,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.10e-14!8;CL:0000540!5.27e-11!6;CL:0000031!5.27e-11!6;CL:0000404!5.27e-11!6;CL:0002319!3.46e-09!25;CL:0000128!7.61e-07!7;CL:0000126!7.61e-07!7;CL:0000127!7.61e-07!7;CL:0002453!7.61e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;5.25e-09;7!CL:0000126;5.25e-09;7!CL:0000127;5.25e-09;7!CL:0002605;2.31e-08;3!CL:0002319;1.05e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,5.40e-09,7;CL:0000126,5.40e-09,7;CL:0000127,5.40e-09,7;CL:0002453,5.40e-09,7;CL:0002605,2.47e-08,3;CL:0000047,4.65e-08,8;CL:0002319,1.06e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.45e-22;82!UBERON:0006241;3.91e-10;3!UBERON:0003057;3.91e-10;3!UBERON:0006215;2.21e-09;3!UBERON:0010122;1.79e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@RFX4 | |||
}} |
Latest revision as of 03:00, 16 September 2015
Short description: | p2@RFX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RFX4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000392842, NM_213594_5end |
EntrezGene: | RFX4 |
HGNC: | 9985 |
UniProt: | Q33E94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 5.40e-09 | 7 |
macroglial cell | 5.40e-09 | 7 |
astrocyte | 5.40e-09 | 7 |
oligodendrocyte precursor cell | 5.40e-09 | 7 |
astrocyte of the cerebral cortex | 2.47e-08 | 3 |
neuronal stem cell | 4.65e-08 | 8 |
neural cell | 1.06e-07 | 25 |