FFCP PHASE1:Hg19::chr5:149535298..149535305,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5159 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8804 | |||
|TSSclassifier=strong | |||
|UniProt=E5RJ14 | |||
|association_with_transcript=-108bp_to_ENST00000517488_5end | |||
|cluster_id=chr5:149535298..149535305,- | |||
|coexpression_cluster_id=C1528 | |||
|description=CAGE_peak_6_at_PDGFRB_5end | |||
|id=chr5:149535298..149535305,- | |||
|ontology_enrichment_celltype=CL:0000055!7.99e-21!180;CL:0000057!8.83e-21!75;CL:0002620!2.41e-09!23;CL:0000136!6.73e-08!15;CL:0002334!2.02e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.31e-10;12!CL:0000136;7.59e-09;13!CL:0002570;1.48e-08;8!CL:0002620;5.77e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.75e-16,76;CL:0000136,5.25e-11,15;CL:0002334,1.83e-10,12;CL:0002570,1.25e-08,8;CL:0002620,4.68e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.47e-15!365;UBERON:0007023!1.75e-13!115;UBERON:0001013!2.30e-09!14;UBERON:0003102!2.87e-08!95;UBERON:0000481!8.48e-08!347;UBERON:0000914!5.43e-07!83;UBERON:0002329!5.43e-07!83;UBERON:0003077!5.43e-07!83;UBERON:0003059!5.43e-07!83;UBERON:0007282!5.43e-07!83;UBERON:0009618!5.43e-07!83;UBERON:0007285!5.43e-07!83;UBERON:0000153!6.06e-07!129;UBERON:0007811!6.06e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;7.68e-14;14!UBERON:0004457;1.65e-10;9!UBERON:0000042;1.65e-10;9!UBERON:0003688;5.35e-10;6!UBERON:0002358;5.35e-10;6!UBERON:0003684;5.35e-10;6!UBERON:0001178;5.35e-10;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,5.06e-14,14;UBERON:0003688,4.54e-10,6;UBERON:0002358,4.54e-10,6;UBERON:0003684,4.54e-10,6;UBERON:0001178,4.54e-10,6;UBERON:0004457,6.03e-09,12;UBERON:0000042,6.03e-09,12;UBERON:0002199,9.67e-07,46;UBERON:0002416,9.67e-07,46 | |||
|phase1_expression=4.54195948176392,4.28201047781966,7.18867460889453,5.00366491765652,6.25745532198203,7.85104671690332,0,9.47579810140246,4.70134130759709,0,0,0,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0.730310090387373,0.487932798790507,0.369363174230364,1.22400414746552,0.313454721478088,0.572471974262113,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0,0.722878304769133,5.0133791063589,0.579386075843295,3.1811437882044,1.94653948121054,0.0945348171640679,0,0.175669571386252,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0.25326102332916,0.264818361626438,2.29469296599051,0.709336764396714,0,0,0,0.933633106199299,0.404132016209064,0.653847612453835,5.60022482286246,4.60940739583999,0.70296429550139,3.1216007683032,0,1.19558944441441,0.23486899728753,0.161872944368132,0,0.816616685019573,0.245668634623536,1.65321249881225,1.18800285728205,2.71993622206413,1.82032272387605,5.03032699271367,0.505008341862199,0.250237039743928,0,3.07284334616587,0.919463387397059,3.00476117813194,0.113432183160021,0.89694817844431,2.56268866582281,2.7551147150743,3.30100205692843,0.824420233907511,2.06112432036503,1.11670113798954,1.85653965465393,0.974370051611986,1.7670364197088,2.85354685791128,5.01102776138317,3.90510551768276,0.503760491138201,1.3564847384839,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,3.25057549622385,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,5.88034845542168,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784917590417525,0.43596006883328,0.66004457238855,0.646358578788889,10.7296933755565,3.381211010224,3.45719551560332,7.28052058379563,0.514414748524284,0,0.799266537048298,1.85871391755592,2.17048642156577,0,0.325736184293735,2.48774364119782,0,0,0.871533458600294,0.299918973546171,0,0,0,0.718874566474748,3.44585807502342,1.42636905040718,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,1.10422342547226,0.500170521059677,0.271265023699736,2.70362119990049,1.24900292158013,3.31175071571263,2.22568688486155,3.00946099727719,9.09630016223939,3.10419213877515,1.99267679560631,0.921845842708516,1.04260337361699,6.65723935373318,6.86286847621712,0,0,0,0,0,0,6.69891081110698,2.14846762603287,3.08726103876381,4.86928767171664,10.7458522304008,2.73451665944133,2.96836132889982,2.00472601943452,2.13074070375753,0.574890092096664,0,1.16210378459959,0,0,0,0.114814448164607,0.728364672026868,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0.512900250232778,2.29610251989794,0,0.721287081534056,0,0,0,0,1.6068392984416,0.386682873168488,0.770243085573222,0.614014698904518,0.827019434907183,1.07420244868274,0.290033387828457,0.596586391912706,1.69160867728801,0,0,0,0,0.464845549297286,0.94443704049192,0,0,0,0,0.18532421910392,0,1.48863347743867,0.632758849437452,2.66882271493355,1.02359116524534,4.2793898803392,0.318203247925937,0,0,1.37268514868027,0.471249609382746,0.202182481573316,0,0.421258456238981,0,0,0,1.22849920267187,0.424216295861138,2.26016233240486,0,0,0,3.47265320560013,1.31178950409327,0,0.6196469961995,0.281695602532241,0,0.392996164052485,0,0.709522128141196,2.11107635297664,2.63435914367922,2.65631221636001,1.04980416073495,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54175355742871,0,0,0,0,0,0,0,0.281338832821026,0,0,0,6.5751836122853,0.552567831062295,0,0,0,0,0,0,0,1.38100767891707,0,0,0.969332746095218,0.185536196323703,0,0,0,7.97499532978273,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,4.61701551022782,0,0,0,0,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,1.83309043480088,0,0,0,0.337005664903385,2.40773294189637,0.234264445725339,0,0,0,0.394584402849391,0,0,1.39010475182674,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,1.06687918137261,0,3.16373037092745,0,0,0.316553979779393,0,0,2.13452994739353,0,0,0,0,0,0,0,0.815425236441684,0.523014231561666,1.12198039399954,0.577901179803038,0,0.273810757783986,0,0,0,3.6306712165393,1.3749625440701,0,0,0.429226048136571,1.78537165953498,0.873385142327441,1.44119953416961,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0,0.485996453264197,0,0.157611414598396,0.472091293214983,0,0,0,4.2881719582402,2.64836788146173,0,0,0,0,0,0,0.511164065356265,0.226624183040251,0.146552233678082,0,0.646414781807753,0.13223260174269,0,0,0.961086713109252,1.72924735609633,2.48543433208317,1.9846640872478,0,0,0,1.08803560673895,0.2506898940227,0,0.327872630709804,0,0,0.488105059607853,0.500763722825999,0.573409195690071,0.443716206147409,0.4346748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| |||
|short_description=p6@PDGFRB | |||
}} |
Latest revision as of 03:06, 16 September 2015
Short description: | p6@PDGFRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PDGFRB_5end |
Coexpression cluster: | C1528_Mesenchymal_Pericytes_mesodermal_Adipocyte_Fibroblast_Multipotent_Hair |
Association with transcript: | -108bp_to_ENST00000517488_5end |
EntrezGene: | PDGFRB |
HGNC: | 8804 |
UniProt: | E5RJ14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.75e-16 | 76 |
fat cell | 5.25e-11 | 15 |
preadipocyte | 1.83e-10 | 12 |
mesenchymal stem cell of adipose | 1.25e-08 | 8 |
skin fibroblast | 4.68e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 5.06e-14 | 14 |
omentum | 4.54e-10 | 6 |
peritoneum | 4.54e-10 | 6 |
abdominal cavity | 4.54e-10 | 6 |
visceral peritoneum | 4.54e-10 | 6 |
cavity lining | 6.03e-09 | 12 |
serous membrane | 6.03e-09 | 12 |
integument | 9.67e-07 | 46 |
integumental system | 9.67e-07 | 46 |