FFCP PHASE1:Hg19::chr1:228332714..228332751,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2987 | |EntrezGene=2987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4693 | |HGNC=4693 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=116bp_to_ENST00000470040_5end | |association_with_transcript=116bp_to_ENST00000470040_5end | ||
|cluster_id=chr1:228332714..228332751,+ | |||
|coexpression_cluster_id=C124 | |coexpression_cluster_id=C124 | ||
|description=CAGE_peak_16_at_GUK1_5end | |description=CAGE_peak_16_at_GUK1_5end | ||
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|ontology_enrichment_celltype=CL:0000039!1.64e-12!7;CL:0000586!1.64e-12!7;CL:0000764!6.17e-12!2;CL:0000765!6.17e-12!2;CL:0000050!6.17e-12!2;CL:0000038!6.17e-12!2;CL:0000558!6.17e-12!2;CL:0000547!6.17e-12!2;CL:0000549!6.17e-12!2;CL:0000550!6.17e-12!2;CL:0000552!6.17e-12!2 | |ontology_enrichment_celltype=CL:0000039!1.64e-12!7;CL:0000586!1.64e-12!7;CL:0000764!6.17e-12!2;CL:0000765!6.17e-12!2;CL:0000050!6.17e-12!2;CL:0000038!6.17e-12!2;CL:0000558!6.17e-12!2;CL:0000547!6.17e-12!2;CL:0000549!6.17e-12!2;CL:0000550!6.17e-12!2;CL:0000552!6.17e-12!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!8.74e-07!8 | |ontology_enrichment_disease=DOID:1036!8.74e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;6.06e-10;8 | |ontology_enrichment_disease_v019=DOID:1036;6.06e-10;8 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,6.34e-10,8 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.32e-23!15;UBERON:0000179!3.32e-23!15;UBERON:0000463!3.32e-23!15;UBERON:0000998!6.60e-07!1;UBERON:0006868!6.60e-07!1 | |ontology_enrichment_uberon=UBERON:0000178!3.32e-23!15;UBERON:0000179!3.32e-23!15;UBERON:0000463!3.32e-23!15;UBERON:0000998!6.60e-07!1;UBERON:0006868!6.60e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.14e-58;15!UBERON:0000179;4.14e-58;15!UBERON:0000463;4.14e-58;15!UBERON:0002390;5.37e-26;32!UBERON:0002193;2.92e-17;42!UBERON:0002108;1.35e-15;4!UBERON:0002114;2.40e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.14e-58;15!UBERON:0000179;4.14e-58;15!UBERON:0000463;4.14e-58;15!UBERON:0002390;5.37e-26;32!UBERON:0002193;2.92e-17;42!UBERON:0002108;1.35e-15;4!UBERON:0002114;2.40e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.33e-58,15;UBERON:0000179,4.33e-58,15;UBERON:0000463,4.33e-58,15;UBERON:0002108,1.21e-15,4;UBERON:0002390,1.36e-08,98;UBERON:0003061,1.36e-08,98;UBERON:0004535,9.08e-08,109;UBERON:0002193,9.08e-08,108;UBERON:0001009,1.50e-07,112;UBERON:0007023,2.08e-07,114;UBERON:0002114,2.19e-07,2 | |||
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|short_description=p16@GUK1 | |short_description=p16@GUK1 | ||
}} | }} |
Latest revision as of 03:27, 16 September 2015
Short description: | p16@GUK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_GUK1_5end |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | 116bp_to_ENST00000470040_5end |
EntrezGene: | GUK1 |
HGNC: | 4693 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 4.33e-58 | 15 |
haemolymphatic fluid | 4.33e-58 | 15 |
organism substance | 4.33e-58 | 15 |
small intestine | 1.21e-15 | 4 |
hematopoietic system | 1.36e-08 | 98 |
blood island | 1.36e-08 | 98 |
cardiovascular system | 9.08e-08 | 109 |
hemolymphoid system | 9.08e-08 | 108 |
circulatory system | 1.50e-07 | 112 |
adult organism | 2.08e-07 | 114 |
duodenum | 2.19e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.34e-10 | 8 |