FFCP PHASE1:Hg19::chr12:108523489..108523499,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9671 | |EntrezGene=9671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29117 | |HGNC=29117 | ||
|TSSclassifier=strong | |||
|UniProt=Q2TBF2 | |UniProt=Q2TBF2 | ||
|association_with_transcript=-11bp_to_ENST00000261400,NM_014653,uc001tms.2_5end | |association_with_transcript=-11bp_to_ENST00000261400,NM_014653,uc001tms.2_5end | ||
|cluster_id=chr12:108523489..108523499,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_14_at_WSCD2_5end | |description=CAGE_peak_14_at_WSCD2_5end | ||
|id=chr12:108523489..108523499,+ | |id=chr12:108523489..108523499,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.20e-118;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002037;1.22e-59;6!UBERON:0002680;3.80e-40;9!UBERON:0001895;3.80e-40;9!UBERON:0004733;2.22e-30;12!UBERON:0002028;2.22e-30;12!UBERON:0004732;4.00e-28;13!UBERON:0000341;5.15e-21;2!UBERON:0001954;5.15e-21;2!UBERON:0003022;5.15e-21;2!UBERON:0002421;5.15e-21;2!UBERON:0002600;5.15e-21;2!UBERON:0000349;3.10e-09;5!UBERON:0000073;4.37e-08;53!UBERON:0002616;4.37e-08;53!UBERON:0000974;6.55e-08;6!UBERON:0000955;1.97e-07;68 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p14@WSCD2 | |short_description=p14@WSCD2 | ||
}} | }} |
Latest revision as of 04:07, 16 September 2015
Short description: | p14@WSCD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_WSCD2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -11bp_to_ENST00000261400, NM_014653, uc001tms.2_5end |
EntrezGene: | WSCD2 |
HGNC: | 29117 |
UniProt: | Q2TBF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.96e-60 | 6 |
rhombic lip | 9.96e-60 | 6 |
regional part of metencephalon | 3.32e-40 | 9 |
metencephalon | 3.32e-40 | 9 |
future metencephalon | 3.32e-40 | 9 |
segmental subdivision of hindbrain | 2.01e-30 | 12 |
hindbrain | 2.01e-30 | 12 |
presumptive hindbrain | 2.01e-30 | 12 |
segmental subdivision of nervous system | 3.65e-28 | 13 |
posterior neural tube | 1.52e-24 | 15 |
chordal neural plate | 1.52e-24 | 15 |
Ammon's horn | 4.66e-21 | 2 |
lobe parts of cerebral cortex | 4.66e-21 | 2 |
hippocampal formation | 4.66e-21 | 2 |
limbic lobe | 4.66e-21 | 2 |
throat | 6.96e-21 | 2 |
regional part of nervous system | 1.93e-12 | 53 |
regional part of brain | 1.93e-12 | 53 |
neural tube | 7.99e-12 | 56 |
neural rod | 7.99e-12 | 56 |
future spinal cord | 7.99e-12 | 56 |
neural keel | 7.99e-12 | 56 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
limbic system | 2.97e-09 | 5 |
central nervous system | 2.54e-08 | 81 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
neurectoderm | 5.76e-08 | 86 |
nervous system | 1.45e-07 | 89 |