FFCP PHASE1:Hg19::chr20:388000..388011,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10616 | |EntrezGene=10616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15864 | |HGNC=15864 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JWR1 | |UniProt=Q5JWR1 | ||
|association_with_transcript=-130bp_to_ENST00000411647_5end | |association_with_transcript=-130bp_to_ENST00000411647_5end | ||
|cluster_id=chr20:388000..388011,+ | |||
|description=CAGE_peak_9_at_RBCK1_5end | |description=CAGE_peak_9_at_RBCK1_5end | ||
|id=chr20:388000..388011,+ | |id=chr20:388000..388011,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.58e-09!254;CL:0000223!9.94e-09!59;CL:0002178!1.14e-08!3 | |ontology_enrichment_celltype=CL:0000066!7.58e-09!254;CL:0000223!9.94e-09!59;CL:0002178!1.14e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.18e-38;3!CL:0002076;7.50e-07;42 | |ontology_enrichment_celltype_v019=CL:0002178;2.18e-38;3!CL:0002076;7.50e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.18e-38,3;CL:0002076,9.42e-07,42 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!4.60e-12!143;DOID:305!2.54e-11!106;DOID:162!4.75e-07!235 | |ontology_enrichment_disease=DOID:0050687!4.60e-12!143;DOID:305!2.54e-11!106;DOID:162!4.75e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3119;7.54e-19;14!DOID:299;1.50e-18;25!DOID:3493;1.91e-15;2 | |ontology_enrichment_disease_v019=DOID:3119;7.54e-19;14!DOID:299;1.50e-18;25!DOID:3493;1.91e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,8.27e-19,14;DOID:299,1.50e-18,25;DOID:3493,1.33e-15,2;DOID:305,7.30e-10,106;DOID:0050687,2.39e-07,143 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.61e-23;5!UBERON:0010039;1.61e-23;5!UBERON:0005409;8.88e-12;22!UBERON:0001041;4.56e-09;14!UBERON:0001052;2.18e-08;4!UBERON:0004907;5.86e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000945;1.61e-23;5!UBERON:0010039;1.61e-23;5!UBERON:0005409;8.88e-12;22!UBERON:0001041;4.56e-09;14!UBERON:0001052;2.18e-08;4!UBERON:0004907;5.86e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,4.07e-15,8;UBERON:0010039,4.07e-15,8;UBERON:0005409,1.76e-10,25;UBERON:0001052,2.43e-08,4;UBERON:0004907,6.39e-07,5 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0.276242966807689,0.114814448164607,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0.10893846351899,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0,0,0.330991955875499,0,0,1.42304773014896,0.554698692052555,0,0,0,0,0,0,0.146178634172371,0,0.0969890164884194,0.176512253383001,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,1.00863292007874,0,0,0.576219191952599,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0,0.295282444544246,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,2.22412889249628,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0.344429959321631,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484426936895553,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0.157115589916002,1.12108865325516,0,1.72742072974897,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96300467230486,0.243835849964539,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0.235676547101626,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0.26721740526556,0.18378979906969,0.752122617877125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p9@RBCK1 | |short_description=p9@RBCK1 | ||
}} | }} |
Latest revision as of 04:50, 16 September 2015
Short description: | p9@RBCK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RBCK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -130bp_to_ENST00000411647_5end |
EntrezGene: | RBCK1 |
HGNC: | 15864 |
UniProt: | Q5JWR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.18e-38 | 3 |
endo-epithelial cell | 9.42e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
stomach | 4.07e-15 | 8 |
food storage organ | 4.07e-15 | 8 |
gastrointestinal system | 1.76e-10 | 25 |
rectum | 2.43e-08 | 4 |
lower digestive tract | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 8.27e-19 | 14 |
adenocarcinoma | 1.50e-18 | 25 |
signet ring cell adenocarcinoma | 1.33e-15 | 2 |
carcinoma | 7.30e-10 | 106 |
cell type cancer | 2.39e-07 | 143 |