FFCP PHASE1:Hg19::chr17:50235999..50236008,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56934 | |EntrezGene=56934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1369 | |HGNC=1369 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS85 | |UniProt=Q9NS85 | ||
|association_with_transcript=123bp_to_ENST00000451037,NM_020178,uc002itw.3_5end | |association_with_transcript=123bp_to_ENST00000451037,NM_020178,uc002itw.3_5end | ||
|cluster_id=chr17:50235999..50236008,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_21_at_CA10_5end | |description=CAGE_peak_21_at_CA10_5end | ||
|id=chr17:50235999..50236008,- | |id=chr17:50235999..50236008,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.26e-118;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p21@CA10 | |short_description=p21@CA10 | ||
}} | }} |
Latest revision as of 05:44, 16 September 2015
Short description: | p21@CA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CA10_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 123bp_to_ENST00000451037, NM_020178, uc002itw.3_5end |
EntrezGene: | CA10 |
HGNC: | 1369 |
UniProt: | Q9NS85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 3.09e-70 | 9 |
metencephalon | 3.09e-70 | 9 |
future metencephalon | 3.09e-70 | 9 |
cerebellum | 9.96e-60 | 6 |
rhombic lip | 9.96e-60 | 6 |
segmental subdivision of hindbrain | 6.02e-53 | 12 |
hindbrain | 6.02e-53 | 12 |
presumptive hindbrain | 6.02e-53 | 12 |
segmental subdivision of nervous system | 5.93e-49 | 13 |
posterior neural tube | 1.46e-42 | 15 |
chordal neural plate | 1.46e-42 | 15 |
amygdala | 4.66e-21 | 2 |
regional part of nervous system | 6.22e-19 | 53 |
regional part of brain | 6.22e-19 | 53 |
neural tube | 5.63e-18 | 56 |
neural rod | 5.63e-18 | 56 |
future spinal cord | 5.63e-18 | 56 |
neural keel | 5.63e-18 | 56 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
pons | 2.09e-14 | 3 |
central nervous system | 1.45e-12 | 81 |
neural plate | 1.45e-12 | 82 |
presumptive neural plate | 1.45e-12 | 82 |
neurectoderm | 5.13e-12 | 86 |
nervous system | 2.13e-11 | 89 |
ecto-epithelium | 4.61e-10 | 104 |
adult organism | 2.58e-09 | 114 |
limbic system | 2.97e-09 | 5 |
structure with developmental contribution from neural crest | 4.60e-08 | 132 |
brainstem | 7.25e-08 | 6 |
temporal lobe | 5.70e-07 | 6 |