FFCP PHASE1:Hg19::chr2:239343410..239343432,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51665 | |EntrezGene=51665 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16011 | |HGNC=16011 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-377bp_to_ENST00000468122_5end | |association_with_transcript=-377bp_to_ENST00000468122_5end | ||
|cluster_id=chr2:239343410..239343432,+ | |||
|description=CAGE_peak_10_at_ASB1_5end | |description=CAGE_peak_10_at_ASB1_5end | ||
|id=chr2:239343410..239343432,+ | |id=chr2:239343410..239343432,+ | ||
|ontology_enrichment_celltype=CL:0000359!3.60e-13!32;CL:0000055!7.93e-13!180;CL:0000057!1.10e-10!75;CL:0000192!3.76e-10!42;CL:0000514!3.76e-10!42;CL:0002494!1.98e-09!16;CL:0000569!5.01e-09!4;CL:0000011!5.01e-09!4;CL:0000548!4.84e-08!679;CL:0000004!4.84e-08!679;CL:0000255!4.84e-08!679;CL:0000012!6.74e-08!682;CL:0002592!2.80e-07!3;CL:0002595!2.90e-07!5;CL:0000680!3.57e-07!57;CL:0000056!3.57e-07!57;CL:0000355!3.57e-07!57;CL:0000187!6.21e-07!54;CL:0002334!7.11e-07!12;CL:0002368!8.84e-07!13 | |ontology_enrichment_celltype=CL:0000359!3.60e-13!32;CL:0000055!7.93e-13!180;CL:0000057!1.10e-10!75;CL:0000192!3.76e-10!42;CL:0000514!3.76e-10!42;CL:0002494!1.98e-09!16;CL:0000569!5.01e-09!4;CL:0000011!5.01e-09!4;CL:0000548!4.84e-08!679;CL:0000004!4.84e-08!679;CL:0000255!4.84e-08!679;CL:0000012!6.74e-08!682;CL:0002592!2.80e-07!3;CL:0002595!2.90e-07!5;CL:0000680!3.57e-07!57;CL:0000056!3.57e-07!57;CL:0000355!3.57e-07!57;CL:0000187!6.21e-07!54;CL:0002334!7.11e-07!12;CL:0002368!8.84e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000306;1.47e-13;4!CL:0002547;1.47e-13;4!CL:0000569;1.95e-13;4!CL:0002595;6.15e-11;5!CL:0000359;2.19e-09;32!CL:0002494;1.22e-07;16!CL:0002593;1.23e-07;2!CL:0002589;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.18e-13,4;CL:0002547,1.18e-13,4;CL:0000569,1.83e-13,4;CL:0000011,1.83e-13,4;CL:0002595,6.47e-11,5;CL:0000359,1.02e-09,32;CL:0002494,1.20e-07,16;CL:0002593,1.28e-07,2;CL:0002589,2.40e-07,2;CL:0000192,3.32e-07,43;CL:0000514,3.32e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000011;1.95e-13;4 | |||
|ontology_enrichment_disease=DOID:2394!1.49e-10!14 | |ontology_enrichment_disease=DOID:2394!1.49e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.36e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.28e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004573!6.46e-17!33;UBERON:0004571!6.46e-17!33;UBERON:0001637!4.01e-15!42;UBERON:0003509!4.01e-15!42;UBERON:0004572!4.01e-15!42;UBERON:0004872!5.98e-11!84;UBERON:0001981!5.80e-10!60;UBERON:0007500!5.80e-10!60;UBERON:0004537!5.80e-10!60;UBERON:0006965!5.80e-10!60;UBERON:0000055!6.02e-09!69;UBERON:0004535!1.89e-07!110;UBERON:0001621!2.80e-07!3;UBERON:0003834!2.90e-07!5;UBERON:0001533!2.90e-07!5;UBERON:0002049!4.18e-07!79;UBERON:0007798!4.18e-07!79;UBERON:0001009!4.53e-07!113;UBERON:0003914!5.53e-07!118;UBERON:0000992!7.15e-07!13 | |ontology_enrichment_uberon=UBERON:0004573!6.46e-17!33;UBERON:0004571!6.46e-17!33;UBERON:0001637!4.01e-15!42;UBERON:0003509!4.01e-15!42;UBERON:0004572!4.01e-15!42;UBERON:0004872!5.98e-11!84;UBERON:0001981!5.80e-10!60;UBERON:0007500!5.80e-10!60;UBERON:0004537!5.80e-10!60;UBERON:0006965!5.80e-10!60;UBERON:0000055!6.02e-09!69;UBERON:0004535!1.89e-07!110;UBERON:0001621!2.80e-07!3;UBERON:0003834!2.90e-07!5;UBERON:0001533!2.90e-07!5;UBERON:0002049!4.18e-07!79;UBERON:0007798!4.18e-07!79;UBERON:0001009!4.53e-07!113;UBERON:0003914!5.53e-07!118;UBERON:0000992!7.15e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.07e-16;33!UBERON:0004571;4.07e-16;33!UBERON:0004797;1.47e-13;4!UBERON:0000415;1.47e-13;4!UBERON:0007240;1.47e-13;4!UBERON:0005742;1.47e-13;4!UBERON:0005734;1.47e-13;4!UBERON:0004664;1.47e-13;4!UBERON:0004663;1.47e-13;4!UBERON:0001637;2.61e-12;42!UBERON:0003509;2.61e-12;42!UBERON:0004572;2.61e-12;42!UBERON:0003834;6.15e-11;5!UBERON:0001533;6.15e-11;5!UBERON:0003513;4.58e-08;7!UBERON:0002456;1.23e-07;2!UBERON:0001529;1.81e-07;2!UBERON:0007204;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,5.04e-18,33;UBERON:0004571,5.04e-18,33;UBERON:0001637,4.77e-14,42;UBERON:0003509,4.77e-14,42;UBERON:0004572,4.77e-14,42;UBERON:0000415,1.18e-13,4;UBERON:0007240,1.18e-13,4;UBERON:0005742,1.18e-13,4;UBERON:0005734,1.18e-13,4;UBERON:0004664,1.18e-13,4;UBERON:0004663,1.18e-13,4;UBERON:0004872,3.37e-11,83;UBERON:0003834,6.47e-11,5;UBERON:0001533,6.47e-11,5;UBERON:0007500,7.83e-10,59;UBERON:0001981,7.83e-10,59;UBERON:0004537,7.83e-10,59;UBERON:0006965,7.83e-10,59;UBERON:0000055,1.89e-08,68;UBERON:0004535,2.83e-08,109;UBERON:0004797,3.45e-08,7;UBERON:0003513,4.75e-08,7;UBERON:0001009,5.04e-08,112;UBERON:0003914,1.23e-07,117;UBERON:0002456,1.28e-07,2;UBERON:0001529,2.40e-07,2;UBERON:0007204,2.40e-07,2;UBERON:0002049,2.76e-07,78;UBERON:0007798,2.76e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.759783069987479,5.16395805171553,1.72101972449288,0,0,0,0.98667019366864,0,0.67355336034844,0,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.423863802319124,1.50045548042201,0,0.772921620136887,0,0.506328996723799,0,0,0,0,1.42003837006646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0.35142424497814,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.384417447767103,0,0.321707842287215,0,0,0.532685175939381,0.0821271560138091,0.519254429183621,0.464841513839837,0,0,0.460404944679482,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,1.02090169995667,0,0,4.40737285562896,0.6970372701606,0,0.532306030317022,0,0.37064843820784,1.00187420719394,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0.404364963146632,3.17020642346017,0.842516912477962,0,0.243713489631284,2.11300293513511,0,0,0,0,1.32687795048244,0.876901770507525,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.673554789078584,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0.20453736500431,0,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0.235694034616795,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.597019211547496,0.934853239388898,0,0,0.251567901752575,0,2.51724075236616,0.604923695052956,0.310874401165561,1.33069634990671,0.477890301491107,3.59842489730884,0.155262956876259,0,1.06336685823198,0.521745061811734,0.450772826991655,0,0,0,0.751873899297419,1.85613503951397,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0.368211900503681,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17400080465487,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.759783069987479,5.16395805171553,1.72101972449288,0,0,0,0.98667019366864,0,0.67355336034844,0,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.423863802319124,1.50045548042201,0,0.772921620136887,0,0.506328996723799,0,0,0,0,1.42003837006646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0.35142424497814,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.384417447767103,0,0.321707842287215,0,0,0.532685175939381,0.0821271560138091,0.519254429183621,0.464841513839837,0,0,0.460404944679482,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,1.02090169995667,0,0,4.40737285562896,0.6970372701606,0,0.532306030317022,0,0.37064843820784,1.00187420719394,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0.404364963146632,3.17020642346017,0.842516912477962,0,0.243713489631284,2.11300293513511,0,0,0,0,1.32687795048244,0.876901770507525,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.673554789078584,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0.20453736500431,0,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0.235694034616795,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.597019211547496,0.934853239388898,0,0,0.251567901752575,0,2.51724075236616,0.604923695052956,0.310874401165561,1.33069634990671,0.477890301491107,3.59842489730884,0.155262956876259,0,1.06336685823198,0.521745061811734,0.450772826991655,0,0,0,0.751873899297419,1.85613503951397,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0.368211900503681,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17400080465487,0,0,0,0,0,0,0,0 | ||
|short_description=p10@ASB1 | |short_description=p10@ASB1 | ||
}} | }} |
Latest revision as of 06:05, 16 September 2015
Short description: | p10@ASB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ASB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -377bp_to_ENST00000468122_5end |
EntrezGene: | ASB1 |
HGNC: | 16011 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.18e-13 | 4 |
fibroblast of the aortic adventitia | 1.18e-13 | 4 |
cardiac mesenchymal cell | 1.83e-13 | 4 |
migratory trunk neural crest cell | 1.83e-13 | 4 |
smooth muscle cell of the subclavian artery | 6.47e-11 | 5 |
vascular associated smooth muscle cell | 1.02e-09 | 32 |
cardiocyte | 1.20e-07 | 16 |
smooth muscle cell of the internal thoracic artery | 1.28e-07 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 2.40e-07 | 2 |
smooth muscle cell | 3.32e-07 | 43 |
smooth muscle myoblast | 3.32e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 5.04e-18 | 33 |
systemic arterial system | 5.04e-18 | 33 |
artery | 4.77e-14 | 42 |
arterial blood vessel | 4.77e-14 | 42 |
arterial system | 4.77e-14 | 42 |
artery wall | 1.18e-13 | 4 |
tunica adventitia of artery | 1.18e-13 | 4 |
adventitia | 1.18e-13 | 4 |
tunica adventitia of blood vessel | 1.18e-13 | 4 |
aorta tunica adventitia | 1.18e-13 | 4 |
aorta wall | 1.18e-13 | 4 |
splanchnic layer of lateral plate mesoderm | 3.37e-11 | 83 |
thoracic segment blood vessel | 6.47e-11 | 5 |
subclavian artery | 6.47e-11 | 5 |
epithelial tube open at both ends | 7.83e-10 | 59 |
blood vessel | 7.83e-10 | 59 |
blood vasculature | 7.83e-10 | 59 |
vascular cord | 7.83e-10 | 59 |
vessel | 1.89e-08 | 68 |
cardiovascular system | 2.83e-08 | 109 |
blood vessel layer | 3.45e-08 | 7 |
trunk blood vessel | 4.75e-08 | 7 |
circulatory system | 5.04e-08 | 112 |
epithelial tube | 1.23e-07 | 117 |
internal thoracic artery | 1.28e-07 | 2 |
brachiocephalic artery | 2.40e-07 | 2 |
brachiocephalic vasculature | 2.40e-07 | 2 |
vasculature | 2.76e-07 | 78 |
vascular system | 2.76e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.28e-08 | 14 |