FFCP PHASE1:Hg19::chr1:22987434..22987553,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=713 | |EntrezGene=713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1242 | |HGNC=1242 | ||
|TSSclassifier=strong | |||
|UniProt=P02746 | |UniProt=P02746 | ||
|association_with_transcript=-239bp_to_M36278_5end | |association_with_transcript=-239bp_to_M36278_5end | ||
|cluster_id=chr1:22987434..22987553,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_2_at_C1QB_5end | |description=CAGE_peak_2_at_C1QB_5end | ||
|id=chr1:22987434..22987553,+ | |id=chr1:22987434..22987553,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.88e-12;6!CL:0002619;2.68e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.58e-12,6;CL:0002619,2.69e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.36e-10;7!UBERON:0006241;7.21e-09;3!UBERON:0003057;7.21e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.47e-84!115;UBERON:0001049!2.18e-36!57;UBERON:0005068!2.18e-36!57;UBERON:0006241!2.18e-36!57;UBERON:0007135!2.18e-36!57;UBERON:0003080!1.08e-29!42;UBERON:0002616!7.89e-29!59;UBERON:0002780!2.14e-28!41;UBERON:0001890!2.14e-28!41;UBERON:0006240!2.14e-28!41;UBERON:0001017!2.26e-27!82;UBERON:0003075!5.66e-27!86;UBERON:0007284!5.66e-27!86;UBERON:0005743!1.16e-26!86;UBERON:0000955!2.38e-25!69;UBERON:0006238!2.38e-25!69;UBERON:0002346!4.31e-25!90;UBERON:0002020!2.91e-23!34;UBERON:0003528!2.91e-23!34;UBERON:0001893!4.03e-23!34;UBERON:0000073!9.96e-23!94;UBERON:0001016!9.96e-23!94;UBERON:0002791!2.34e-22!33;UBERON:0001869!8.58e-21!32;UBERON:0003056!2.01e-18!61;UBERON:0000062!1.30e-16!511;UBERON:0002619!1.53e-16!22;UBERON:0000153!4.39e-15!129;UBERON:0007811!4.39e-15!129;UBERON:0001950!3.20e-14!20;UBERON:0000956!5.40e-14!25;UBERON:0000203!5.40e-14!25;UBERON:0000033!3.70e-13!123;UBERON:0002420!3.37e-12!9;UBERON:0007245!3.37e-12!9;UBERON:0010009!3.37e-12!9;UBERON:0010011!3.37e-12!9;UBERON:0000454!3.37e-12!9;UBERON:0000467!5.57e-12!625;UBERON:0000480!6.64e-12!626;UBERON:0000468!7.43e-12!659;UBERON:0000025!9.06e-12!194;UBERON:0002308!1.38e-11!9;UBERON:0000125!1.38e-11!9;UBERON:0004121!2.65e-11!169;UBERON:0002298!5.27e-11!8;UBERON:0000924!1.04e-10!173;UBERON:0006601!1.04e-10!173;UBERON:0000922!4.98e-10!612;UBERON:0000477!1.07e-09!286;UBERON:0004111!1.11e-09!241;UBERON:0009663!1.42e-09!7;UBERON:0002050!1.48e-09!605;UBERON:0005423!1.48e-09!605;UBERON:0000923!4.10e-09!604;UBERON:0005291!4.10e-09!604;UBERON:0006598!4.10e-09!604;UBERON:0002532!4.10e-09!604;UBERON:0001871!2.43e-08!7;UBERON:0003076!5.83e-08!15;UBERON:0003057!5.83e-08!15;UBERON:0000064!8.16e-08!219;UBERON:0000349!1.57e-07!5 | |ontology_enrichment_uberon=UBERON:0007023!5.47e-84!115;UBERON:0001049!2.18e-36!57;UBERON:0005068!2.18e-36!57;UBERON:0006241!2.18e-36!57;UBERON:0007135!2.18e-36!57;UBERON:0003080!1.08e-29!42;UBERON:0002616!7.89e-29!59;UBERON:0002780!2.14e-28!41;UBERON:0001890!2.14e-28!41;UBERON:0006240!2.14e-28!41;UBERON:0001017!2.26e-27!82;UBERON:0003075!5.66e-27!86;UBERON:0007284!5.66e-27!86;UBERON:0005743!1.16e-26!86;UBERON:0000955!2.38e-25!69;UBERON:0006238!2.38e-25!69;UBERON:0002346!4.31e-25!90;UBERON:0002020!2.91e-23!34;UBERON:0003528!2.91e-23!34;UBERON:0001893!4.03e-23!34;UBERON:0000073!9.96e-23!94;UBERON:0001016!9.96e-23!94;UBERON:0002791!2.34e-22!33;UBERON:0001869!8.58e-21!32;UBERON:0003056!2.01e-18!61;UBERON:0000062!1.30e-16!511;UBERON:0002619!1.53e-16!22;UBERON:0000153!4.39e-15!129;UBERON:0007811!4.39e-15!129;UBERON:0001950!3.20e-14!20;UBERON:0000956!5.40e-14!25;UBERON:0000203!5.40e-14!25;UBERON:0000033!3.70e-13!123;UBERON:0002420!3.37e-12!9;UBERON:0007245!3.37e-12!9;UBERON:0010009!3.37e-12!9;UBERON:0010011!3.37e-12!9;UBERON:0000454!3.37e-12!9;UBERON:0000467!5.57e-12!625;UBERON:0000480!6.64e-12!626;UBERON:0000468!7.43e-12!659;UBERON:0000025!9.06e-12!194;UBERON:0002308!1.38e-11!9;UBERON:0000125!1.38e-11!9;UBERON:0004121!2.65e-11!169;UBERON:0002298!5.27e-11!8;UBERON:0000924!1.04e-10!173;UBERON:0006601!1.04e-10!173;UBERON:0000922!4.98e-10!612;UBERON:0000477!1.07e-09!286;UBERON:0004111!1.11e-09!241;UBERON:0009663!1.42e-09!7;UBERON:0002050!1.48e-09!605;UBERON:0005423!1.48e-09!605;UBERON:0000923!4.10e-09!604;UBERON:0005291!4.10e-09!604;UBERON:0006598!4.10e-09!604;UBERON:0002532!4.10e-09!604;UBERON:0001871!2.43e-08!7;UBERON:0003076!5.83e-08!15;UBERON:0003057!5.83e-08!15;UBERON:0000064!8.16e-08!219;UBERON:0000349!1.57e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002791;8.88e-12;32!UBERON:0001893;2.30e-11;34!UBERON:0002780;3.07e-11;41!UBERON:0001890;3.07e-11;41!UBERON:0002420;1.44e-10;9!UBERON:0007245;1.44e-10;9!UBERON:0010009;1.44e-10;9!UBERON:0010011;1.44e-10;9!UBERON:0000454;1.44e-10;9!UBERON:0007023;1.87e-10;114!UBERON:0003528;2.97e-10;34!UBERON:0002020;2.97e-10;34!UBERON:0001869;3.05e-10;32!UBERON:0002619;2.51e-09;22!UBERON:0002240;7.21e-09;3!UBERON:0005174;7.21e-09;3!UBERON:0001137;7.21e-09;3!UBERON:0000349;8.85e-09;5!UBERON:0000073;1.04e-08;53!UBERON:0002616;1.04e-08;53!UBERON:0000956;4.98e-08;25!UBERON:0000203;4.98e-08;25!UBERON:0000125;2.10e-07;9!UBERON:0002308;2.10e-07;9!UBERON:0001017;4.45e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.79e-41,114;UBERON:0001049,2.16e-18,56;UBERON:0005068,2.16e-18,56;UBERON:0006241,2.16e-18,56;UBERON:0007135,2.16e-18,56;UBERON:0001017,1.15e-14,81;UBERON:0000073,2.84e-14,53;UBERON:0002616,2.84e-14,53;UBERON:0002780,1.02e-13,41;UBERON:0001890,1.02e-13,41;UBERON:0003080,1.02e-13,41;UBERON:0006240,1.02e-13,41;UBERON:0003528,2.83e-13,34;UBERON:0002020,2.83e-13,34;UBERON:0001893,3.23e-13,34;UBERON:0001016,1.37e-12,89;UBERON:0000955,2.10e-12,68;UBERON:0006238,2.10e-12,68;UBERON:0002791,2.30e-12,32;UBERON:0003075,8.21e-11,82;UBERON:0007284,8.21e-11,82;UBERON:0002420,1.42e-10,9;UBERON:0007245,1.42e-10,9;UBERON:0010009,1.42e-10,9;UBERON:0010011,1.42e-10,9;UBERON:0000454,1.42e-10,9;UBERON:0001869,1.87e-10,32;UBERON:0002346,4.63e-10,86;UBERON:0002619,2.73e-09,22;UBERON:0002240,7.33e-09,3;UBERON:0005174,7.33e-09,3;UBERON:0001137,7.33e-09,3;UBERON:0000349,7.74e-09,5;UBERON:0011216,8.72e-09,223;UBERON:0010371,2.83e-08,104;UBERON:0000025,4.12e-08,192;UBERON:0003056,5.15e-08,61;UBERON:0000956,5.35e-08,25;UBERON:0000203,5.35e-08,25;UBERON:0010314,1.47e-07,132;UBERON:0000125,2.12e-07,9;UBERON:0002308,2.12e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,161.443056926985,146.723830706598,125.954452573117,0.145398238779565,0,0,0,0,0,0.28769239232215,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0,0,0.422510572623884,1.06302149982522,0,0,0,0,0,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,6.16640047943898,5.04976238167875,15.4231234201884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.63272718870932,0.468008530278475,3.86441021950693,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,14.5654556515317,16.8667151586425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.418952838636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,6.21349085126742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39524537815682,0,0,0,0,0,0,2.98244294329889,2.11004124615769,0,0,0,3.58646378851925,1.10513566212459,0,0,0,0,0,0,0,0.887790650732402,2.3948309234694,0,1.93866549219044,1.76259386507517,0,0,0,3.62499787717397,0,0,0,0,0,0,2.65722415744152,2.05013945663194,0,0,0.886642856860642,0.219385397153973,0,0,0.769502585037971,0,0,0,0,0.638002319463839,0.274792780205587,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,3.36138745112689,0.611030144933625,0,0,0,1.07841812769083,0.802577647298789,0.937057782901357,0,0,0,0.394584402849391,2.41981432097328,0,7.14008349801914,0,0,0,0,0,0,0,0,0,0,0,4.19344003780872,0,0,0,0,0.969890164884194,0,1.12990370390266,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,3.14882371451584,0,0,0,0.558564802544508,0.916641696046735,0.717873024576814,1.19807400299395,0.429226048136571,2.4548860318606,0.403100834920358,0,0,0,0,0,0,0,2.38568906942791,1.36203406111576,0,0,0,0,0,0.182248669974074,0,1.41850273138557,0.0524545881349981,0,0,0,5.00286728461357,1.32418394073086,0,0,0,0,0,0,0,0,3.95691030930823,7.95041333473328,0.387848869084652,1.3223260174269,0,0,9.61086713109252,0.157204305099666,22.7831480440958,17.3658107634183,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,1.22026264901963,1.3771002377715,6.30750115259078,1.77486482458964,0.931446044120752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,1.11743701340006,1.23069818544453,0.252071696221718,0.345786262321089,0.968853873791107,0,0,0,0,0,0,0,0,1.12815492523886,0,0.781514011233092,0,0,0,0.202612753855184,0.781078098613847,1.2401207790071,0.19024743058172,0,0,3.47347824872506,0,0,0.535701835878287,1.3451348888753,0,0.455324382702595,1.77404740325278,0,0,0.339848664884159,0.394636641377094,0,0,0.941917114206168,0.471346769748006,0,0.913158720509496,0,0,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,1.45713297917742,0,0,0,0,0,0,2.70109553377806,0.437119121007915,0,0.980593287015622,0,3.72986087518396,3.26751040359795,1.2679671827502,0,21.9922368072857,4.83434159801829,0,0,0,0,0,0,3.72682916193773,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,3.10692662694782,0.535928260312357,0.829169439458779,1.55149493792843,1.27940389140589,0.23806443146374,0.516711278688049,2.04846557176331,0,0.700118741059814,0.404234377916439,0.653150243690884,1.02669990325584,0.26940821205835,0.860666464712116,0.665320713092027,0,0,0,0,0,0,1.22068853494722,0,2.01273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,161.443056926985,146.723830706598,125.954452573117,0.145398238779565,0,0,0,0,0,0.28769239232215,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0,0,0.422510572623884,1.06302149982522,0,0,0,0,0,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,6.16640047943898,5.04976238167875,15.4231234201884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.63272718870932,0.468008530278475,3.86441021950693,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,14.5654556515317,16.8667151586425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.418952838636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,6.21349085126742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39524537815682,0,0,0,0,0,0,2.98244294329889,2.11004124615769,0,0,0,3.58646378851925,1.10513566212459,0,0,0,0,0,0,0,0.887790650732402,2.3948309234694,0,1.93866549219044,1.76259386507517,0,0,0,3.62499787717397,0,0,0,0,0,0,2.65722415744152,2.05013945663194,0,0,0.886642856860642,0.219385397153973,0,0,0.769502585037971,0,0,0,0,0.638002319463839,0.274792780205587,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,3.36138745112689,0.611030144933625,0,0,0,1.07841812769083,0.802577647298789,0.937057782901357,0,0,0,0.394584402849391,2.41981432097328,0,7.14008349801914,0,0,0,0,0,0,0,0,0,0,0,4.19344003780872,0,0,0,0,0.969890164884194,0,1.12990370390266,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,3.14882371451584,0,0,0,0.558564802544508,0.916641696046735,0.717873024576814,1.19807400299395,0.429226048136571,2.4548860318606,0.403100834920358,0,0,0,0,0,0,0,2.38568906942791,1.36203406111576,0,0,0,0,0,0.182248669974074,0,1.41850273138557,0.0524545881349981,0,0,0,5.00286728461357,1.32418394073086,0,0,0,0,0,0,0,0,3.95691030930823,7.95041333473328,0.387848869084652,1.3223260174269,0,0,9.61086713109252,0.157204305099666,22.7831480440958,17.3658107634183,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,1.22026264901963,1.3771002377715,6.30750115259078,1.77486482458964,0.931446044120752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,1.11743701340006,1.23069818544453,0.252071696221718,0.345786262321089,0.968853873791107,0,0,0,0,0,0,0,0,1.12815492523886,0,0.781514011233092,0,0,0,0.202612753855184,0.781078098613847,1.2401207790071,0.19024743058172,0,0,3.47347824872506,0,0,0.535701835878287,1.3451348888753,0,0.455324382702595,1.77404740325278,0,0,0.339848664884159,0.394636641377094,0,0,0.941917114206168,0.471346769748006,0,0.913158720509496,0,0,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,1.45713297917742,0,0,0,0,0,0,2.70109553377806,0.437119121007915,0,0.980593287015622,0,3.72986087518396,3.26751040359795,1.2679671827502,0,21.9922368072857,4.83434159801829,0,0,0,0,0,0,3.72682916193773,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,3.10692662694782,0.535928260312357,0.829169439458779,1.55149493792843,1.27940389140589,0.23806443146374,0.516711278688049,2.04846557176331,0,0.700118741059814,0.404234377916439,0.653150243690884,1.02669990325584,0.26940821205835,0.860666464712116,0.665320713092027,0,0,0,0,0,0,1.22068853494722,0,2.01273793591026,0 | ||
|short_description=p2@C1QB | |short_description=p2@C1QB | ||
}} | }} |
Latest revision as of 06:40, 16 September 2015
Short description: | p2@C1QB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1QB_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -239bp_to_M36278_5end |
EntrezGene: | C1QB |
HGNC: | 1242 |
UniProt: | P02746 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.58e-12 | 6 |
adult endothelial progenitor cell | 2.69e-10 | 3 |