FFCP PHASE1:Hg19::chr9:136343636..136343662,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11182 | |EntrezGene=11182 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11011 | |HGNC=11011 | ||
|TSSclassifier=strong | |||
|UniProt=Q59GK1 | |UniProt=Q59GK1 | ||
|association_with_transcript=327bp_to_AB209108_5end | |association_with_transcript=327bp_to_AB209108_5end | ||
|cluster_id=chr9:136343636..136343662,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_SLC2A6_5end | |description=CAGE_peak_3_at_SLC2A6_5end | ||
|id=chr9:136343636..136343662,- | |id=chr9:136343636..136343662,- | ||
|ontology_enrichment_celltype=CL:0002057!3.54e-50!42;CL:0000860!7.09e-46!45;CL:0000766!1.52e-40!76;CL:0002194!1.05e-35!63;CL:0000576!1.05e-35!63;CL:0000040!1.05e-35!63;CL:0000559!1.05e-35!63;CL:0000839!1.62e-35!70;CL:0000557!8.38e-35!71;CL:0002009!3.64e-34!65;CL:0000738!3.69e-23!140;CL:0000763!3.21e-22!112;CL:0000049!3.21e-22!112;CL:0002087!7.03e-20!119;CL:0002031!5.31e-19!124;CL:0000988!1.57e-18!182;CL:0000037!1.48e-15!172;CL:0000566!1.48e-15!172;CL:0002032!2.66e-14!165;CL:0000837!2.66e-14!165;CL:0002393!4.30e-10!9;CL:0002397!4.30e-10!9;CL:0000144!8.95e-09!625;CL:0000048!4.17e-08!430;CL:0002371!8.24e-08!591;CL:0000723!1.10e-07!436;CL:0000034!1.32e-07!444;CL:0000012!1.50e-07!682;CL:0000080!3.19e-07!6;CL:0000548!3.48e-07!679;CL:0000004!3.48e-07!679;CL:0000255!3.48e-07!679 | |ontology_enrichment_celltype=CL:0002057!3.54e-50!42;CL:0000860!7.09e-46!45;CL:0000766!1.52e-40!76;CL:0002194!1.05e-35!63;CL:0000576!1.05e-35!63;CL:0000040!1.05e-35!63;CL:0000559!1.05e-35!63;CL:0000839!1.62e-35!70;CL:0000557!8.38e-35!71;CL:0002009!3.64e-34!65;CL:0000738!3.69e-23!140;CL:0000763!3.21e-22!112;CL:0000049!3.21e-22!112;CL:0002087!7.03e-20!119;CL:0002031!5.31e-19!124;CL:0000988!1.57e-18!182;CL:0000037!1.48e-15!172;CL:0000566!1.48e-15!172;CL:0002032!2.66e-14!165;CL:0000837!2.66e-14!165;CL:0002393!4.30e-10!9;CL:0002397!4.30e-10!9;CL:0000144!8.95e-09!625;CL:0000048!4.17e-08!430;CL:0002371!8.24e-08!591;CL:0000723!1.10e-07!436;CL:0000034!1.32e-07!444;CL:0000012!1.50e-07!682;CL:0000080!3.19e-07!6;CL:0000548!3.48e-07!679;CL:0000004!3.48e-07!679;CL:0000255!3.48e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.24e-55;33!CL:0002057;2.24e-55;33!CL:0000473;1.51e-42;39!CL:0000234;1.51e-42;39!CL:0000576;3.49e-30;48!CL:0000766;4.50e-23;69!CL:0002087;2.37e-12;104!CL:0000763;3.96e-10;100!CL:0002393;9.57e-09;6!CL:0002397;9.57e-09;6!CL:0002138;4.74e-08;6!CL:0000226;8.47e-08;3!CL:0000842;8.47e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.92e-62,42;CL:0002057,3.92e-62,42;CL:0000473,1.15e-58,48;CL:0000234,1.15e-58,48;CL:0002194,7.83e-50,59;CL:0000576,7.83e-50,59;CL:0000040,7.83e-50,59;CL:0000559,7.83e-50,59;CL:0002009,4.79e-48,61;CL:0000839,4.79e-44,66;CL:0000766,2.48e-43,72;CL:0000557,2.57e-43,67;CL:0002087,1.90e-27,115;CL:0000763,3.97e-27,108;CL:0000049,3.97e-27,108;CL:0000738,3.23e-24,136;CL:0000988,6.17e-22,177;CL:0002031,6.63e-22,120;CL:0000037,1.75e-18,168;CL:0002032,2.23e-16,161;CL:0000837,2.23e-16,161;CL:0005020,4.86e-08,6;CL:0002138,4.86e-08,6;CL:0005022,4.86e-08,6;CL:0000226,8.48e-08,3;CL:0000842,8.48e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.24e-47;42!CL:0005022;4.74e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.45e-29!80;UBERON:0002193!1.45e-26!112;UBERON:0002390!2.13e-26!102;UBERON:0003061!2.13e-26!102;UBERON:0001474!4.10e-26!86;UBERON:0003081!1.42e-23!216;UBERON:0002405!1.59e-23!115;UBERON:0004765!3.00e-22!101;UBERON:0001434!3.00e-22!101;UBERON:0002204!1.57e-17!167;UBERON:0000926!1.09e-08!448;UBERON:0004120!1.09e-08!448;UBERON:0006603!1.09e-08!448;UBERON:0004535!9.77e-08!110;UBERON:0001009!2.70e-07!113;UBERON:0002049!3.47e-07!79;UBERON:0007798!3.47e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.61e-08;15!UBERON:0000179;3.61e-08;15!UBERON:0000463;3.61e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.06e-46,108;UBERON:0002390,1.38e-41,98;UBERON:0003061,1.38e-41,98;UBERON:0002405,5.06e-38,93;UBERON:0002371,1.32e-37,76;UBERON:0001474,1.75e-34,82;UBERON:0004765,5.81e-31,90;UBERON:0001434,2.41e-27,100;UBERON:0003081,2.42e-21,203;UBERON:0002204,1.29e-15,167;UBERON:0000926,2.21e-11,315;UBERON:0004120,2.21e-11,315;UBERON:0006603,2.21e-11,315;UBERON:0000178,3.55e-08,15;UBERON:0000179,3.55e-08,15;UBERON:0000463,3.55e-08,15 | |||
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|short_description=p3@SLC2A6 | |short_description=p3@SLC2A6 | ||
}} | }} |
Latest revision as of 07:20, 16 September 2015
Short description: | p3@SLC2A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC2A6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 327bp_to_AB209108_5end |
EntrezGene: | SLC2A6 |
HGNC: | 11011 |
UniProt: | Q59GK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.92e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.92e-62 | 42 |
defensive cell | 1.15e-58 | 48 |
phagocyte | 1.15e-58 | 48 |
monopoietic cell | 7.83e-50 | 59 |
monocyte | 7.83e-50 | 59 |
monoblast | 7.83e-50 | 59 |
promonocyte | 7.83e-50 | 59 |
macrophage dendritic cell progenitor | 4.79e-48 | 61 |
myeloid lineage restricted progenitor cell | 4.79e-44 | 66 |
myeloid leukocyte | 2.48e-43 | 72 |
granulocyte monocyte progenitor cell | 2.57e-43 | 67 |
nongranular leukocyte | 1.90e-27 | 115 |
myeloid cell | 3.97e-27 | 108 |
common myeloid progenitor | 3.97e-27 | 108 |
leukocyte | 3.23e-24 | 136 |
hematopoietic cell | 6.17e-22 | 177 |
hematopoietic lineage restricted progenitor cell | 6.63e-22 | 120 |
hematopoietic stem cell | 1.75e-18 | 168 |
hematopoietic oligopotent progenitor cell | 2.23e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.23e-16 | 161 |
lymphangioblast | 4.86e-08 | 6 |
endothelial cell of lymphatic vessel | 4.86e-08 | 6 |
vascular lymphangioblast | 4.86e-08 | 6 |
single nucleate cell | 8.48e-08 | 3 |
mononuclear cell | 8.48e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.06e-46 | 108 |
hematopoietic system | 1.38e-41 | 98 |
blood island | 1.38e-41 | 98 |
immune system | 5.06e-38 | 93 |
bone marrow | 1.32e-37 | 76 |
bone element | 1.75e-34 | 82 |
skeletal element | 5.81e-31 | 90 |
skeletal system | 2.41e-27 | 100 |
lateral plate mesoderm | 2.42e-21 | 203 |
musculoskeletal system | 1.29e-15 | 167 |
mesoderm | 2.21e-11 | 315 |
mesoderm-derived structure | 2.21e-11 | 315 |
presumptive mesoderm | 2.21e-11 | 315 |
blood | 3.55e-08 | 15 |
haemolymphatic fluid | 3.55e-08 | 15 |
organism substance | 3.55e-08 | 15 |