FFCP PHASE1:Hg19::chr5:150829095..150829107,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=206358 | |EntrezGene=206358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18761 | |HGNC=18761 | ||
|TSSclassifier=strong | |||
|UniProt=E5RI40 | |UniProt=E5RI40 | ||
|association_with_transcript=-467bp_to_ENST00000519829_5end | |association_with_transcript=-467bp_to_ENST00000519829_5end | ||
|cluster_id=chr5:150829095..150829107,+ | |||
|coexpression_cluster_id=C190 | |coexpression_cluster_id=C190 | ||
|description=CAGE_peak_9_at_SLC36A1_5end | |description=CAGE_peak_9_at_SLC36A1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002274!3.66e-13!5;CL:0000457!3.66e-13!5;CL:0002191!3.66e-13!5;CL:0000097!3.66e-13!5;CL:0000831!3.66e-13!5;CL:0002028!3.66e-13!5;CL:0000764!4.71e-09!2;CL:0000765!4.71e-09!2;CL:0000050!4.71e-09!2;CL:0000038!4.71e-09!2;CL:0000558!4.71e-09!2;CL:0000547!4.71e-09!2;CL:0000549!4.71e-09!2;CL:0000550!4.71e-09!2;CL:0000552!4.71e-09!2;CL:0000163!2.65e-07!9 | |ontology_enrichment_celltype=CL:0002274!3.66e-13!5;CL:0000457!3.66e-13!5;CL:0002191!3.66e-13!5;CL:0000097!3.66e-13!5;CL:0000831!3.66e-13!5;CL:0002028!3.66e-13!5;CL:0000764!4.71e-09!2;CL:0000765!4.71e-09!2;CL:0000050!4.71e-09!2;CL:0000038!4.71e-09!2;CL:0000558!4.71e-09!2;CL:0000547!4.71e-09!2;CL:0000549!4.71e-09!2;CL:0000550!4.71e-09!2;CL:0000552!4.71e-09!2;CL:0000163!2.65e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.35e-18;5!CL:0000764;2.90e-12;2!CL:0000558;2.90e-12;2!CL:0000163;8.79e-11;9 | |ontology_enrichment_celltype_v019=CL:0000097;1.35e-18;5!CL:0000764;2.90e-12;2!CL:0000558;2.90e-12;2!CL:0000163;8.79e-11;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.24e-18,5;CL:0002028,1.24e-18,5;CL:0000764,3.62e-12,2;CL:0000765,3.62e-12,2;CL:0000050,3.62e-12,2;CL:0000038,3.62e-12,2;CL:0000558,3.62e-12,2;CL:0000547,3.62e-12,2;CL:0000549,3.62e-12,2;CL:0000550,3.62e-12,2;CL:0000552,3.62e-12,2;CL:0000163,8.37e-11,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.40e-66;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.40e-66;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.14e-18!115;UBERON:0001950!6.88e-16!20;UBERON:0001049!1.87e-14!57;UBERON:0005068!1.87e-14!57;UBERON:0006241!1.87e-14!57;UBERON:0007135!1.87e-14!57;UBERON:0002619!2.48e-14!22;UBERON:0002616!7.75e-14!59;UBERON:0000955!1.56e-12!69;UBERON:0006238!1.56e-12!69;UBERON:0000956!1.90e-12!25;UBERON:0000203!1.90e-12!25;UBERON:0001869!2.58e-11!32;UBERON:0001017!2.92e-11!82;UBERON:0005743!1.51e-10!86;UBERON:0001893!1.54e-10!34;UBERON:0000200!3.06e-10!6;UBERON:0002780!4.92e-10!41;UBERON:0001890!4.92e-10!41;UBERON:0006240!4.92e-10!41;UBERON:0003080!9.62e-10!42;UBERON:0003075!1.68e-09!86;UBERON:0007284!1.68e-09!86;UBERON:0000073!3.64e-09!94;UBERON:0001016!3.64e-09!94;UBERON:0002791!4.68e-09!33;UBERON:0002346!6.62e-09!90;UBERON:0002020!9.64e-09!34;UBERON:0003528!9.64e-09!34;UBERON:0001870!1.43e-08!2;UBERON:0004733!7.25e-08!12;UBERON:0002028!7.25e-08!12;UBERON:0007277!7.25e-08!12;UBERON:0001872!2.45e-07!5;UBERON:0002021!2.56e-07!5;UBERON:0004732!3.12e-07!13;UBERON:0002680!3.96e-07!9;UBERON:0001895!3.96e-07!9;UBERON:0010092!3.96e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!2.14e-18!115;UBERON:0001950!6.88e-16!20;UBERON:0001049!1.87e-14!57;UBERON:0005068!1.87e-14!57;UBERON:0006241!1.87e-14!57;UBERON:0007135!1.87e-14!57;UBERON:0002619!2.48e-14!22;UBERON:0002616!7.75e-14!59;UBERON:0000955!1.56e-12!69;UBERON:0006238!1.56e-12!69;UBERON:0000956!1.90e-12!25;UBERON:0000203!1.90e-12!25;UBERON:0001869!2.58e-11!32;UBERON:0001017!2.92e-11!82;UBERON:0005743!1.51e-10!86;UBERON:0001893!1.54e-10!34;UBERON:0000200!3.06e-10!6;UBERON:0002780!4.92e-10!41;UBERON:0001890!4.92e-10!41;UBERON:0006240!4.92e-10!41;UBERON:0003080!9.62e-10!42;UBERON:0003075!1.68e-09!86;UBERON:0007284!1.68e-09!86;UBERON:0000073!3.64e-09!94;UBERON:0001016!3.64e-09!94;UBERON:0002791!4.68e-09!33;UBERON:0002346!6.62e-09!90;UBERON:0002020!9.64e-09!34;UBERON:0003528!9.64e-09!34;UBERON:0001870!1.43e-08!2;UBERON:0004733!7.25e-08!12;UBERON:0002028!7.25e-08!12;UBERON:0007277!7.25e-08!12;UBERON:0001872!2.45e-07!5;UBERON:0002021!2.56e-07!5;UBERON:0004732!3.12e-07!13;UBERON:0002680!3.96e-07!9;UBERON:0001895!3.96e-07!9;UBERON:0010092!3.96e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.17e-33;6!UBERON:0002680;1.01e-22;9!UBERON:0001895;1.01e-22;9!UBERON:0004733;3.07e-17;12!UBERON:0002028;3.07e-17;12!UBERON:0004732;5.71e-16;13 | |ontology_enrichment_uberon_v019=UBERON:0002037;1.17e-33;6!UBERON:0002680;1.01e-22;9!UBERON:0001895;1.01e-22;9!UBERON:0004733;3.07e-17;12!UBERON:0002028;3.07e-17;12!UBERON:0004732;5.71e-16;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.39e-34,6;UBERON:0006215,9.39e-34,6;UBERON:0002680,8.69e-23,9;UBERON:0001895,8.69e-23,9;UBERON:0010092,8.69e-23,9;UBERON:0004733,2.75e-17,12;UBERON:0002028,2.75e-17,12;UBERON:0007277,2.75e-17,12;UBERON:0004732,5.15e-16,13;UBERON:0003076,5.64e-14,15;UBERON:0003057,5.64e-14,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0.621984346622316,1.44119953416961,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,2.32216445855572,2.06883333267483,0.219385397153973,0,0,0,0,0,0.359030577639089,0.651884231532048,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0,0,0,0,0,0.442287822516696,8.55442202907076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.478901577171454,0.205116364240755,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.328863867814245,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,1.15761237161917,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,0.303114792872958,0,0,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0.621984346622316,1.44119953416961,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,2.32216445855572,2.06883333267483,0.219385397153973,0,0,0,0,0,0.359030577639089,0.651884231532048,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0,0,0,0,0,0.442287822516696,8.55442202907076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.478901577171454,0.205116364240755,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.328863867814245,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,1.15761237161917,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,0.303114792872958,0,0,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@SLC36A1 | |short_description=p9@SLC36A1 | ||
}} | }} |
Latest revision as of 09:08, 16 September 2015
Short description: | p9@SLC36A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC36A1_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | -467bp_to_ENST00000519829_5end |
EntrezGene: | SLC36A1 |
HGNC: | 18761 |
UniProt: | E5RI40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.24e-18 | 5 |
basophil mast progenitor cell | 1.24e-18 | 5 |
erythroid lineage cell | 3.62e-12 | 2 |
erythroblast | 3.62e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 3.62e-12 | 2 |
erythroid progenitor cell | 3.62e-12 | 2 |
reticulocyte | 3.62e-12 | 2 |
proerythroblast | 3.62e-12 | 2 |
basophilic erythroblast | 3.62e-12 | 2 |
polychromatophilic erythroblast | 3.62e-12 | 2 |
orthochromatic erythroblast | 3.62e-12 | 2 |
endocrine cell | 8.37e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.39e-34 | 6 |
rhombic lip | 9.39e-34 | 6 |
regional part of metencephalon | 8.69e-23 | 9 |
metencephalon | 8.69e-23 | 9 |
future metencephalon | 8.69e-23 | 9 |
segmental subdivision of hindbrain | 2.75e-17 | 12 |
hindbrain | 2.75e-17 | 12 |
presumptive hindbrain | 2.75e-17 | 12 |
segmental subdivision of nervous system | 5.15e-16 | 13 |
posterior neural tube | 5.64e-14 | 15 |
chordal neural plate | 5.64e-14 | 15 |