FFCP PHASE1:Hg19::chr14:88459487..88459500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2581 | |EntrezGene=2581 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4115 | |HGNC=4115 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000474294_5end | |association_with_transcript=0bp_to_ENST00000474294_5end | ||
|cluster_id=chr14:88459487..88459500,- | |||
|coexpression_cluster_id=C2319 | |coexpression_cluster_id=C2319 | ||
|description=CAGE_peak_3_at_GALC_5end | |description=CAGE_peak_3_at_GALC_5end | ||
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|ontology_enrichment_celltype=CL:0000766!9.56e-23!76;CL:0000763!1.06e-21!112;CL:0000049!1.06e-21!112;CL:0000557!1.56e-20!71;CL:0000839!1.71e-19!70;CL:0002009!3.48e-17!65;CL:0002194!4.12e-16!63;CL:0000576!4.12e-16!63;CL:0000040!4.12e-16!63;CL:0000559!4.12e-16!63;CL:0002057!6.02e-16!42;CL:0000738!7.99e-15!140;CL:0002032!1.26e-14!165;CL:0000837!1.26e-14!165;CL:0000037!6.24e-14!172;CL:0000566!6.24e-14!172;CL:0000988!3.74e-13!182;CL:0000860!8.22e-13!45;CL:0002031!9.99e-12!124;CL:0002087!6.53e-09!119 | |ontology_enrichment_celltype=CL:0000766!9.56e-23!76;CL:0000763!1.06e-21!112;CL:0000049!1.06e-21!112;CL:0000557!1.56e-20!71;CL:0000839!1.71e-19!70;CL:0002009!3.48e-17!65;CL:0002194!4.12e-16!63;CL:0000576!4.12e-16!63;CL:0000040!4.12e-16!63;CL:0000559!4.12e-16!63;CL:0002057!6.02e-16!42;CL:0000738!7.99e-15!140;CL:0002032!1.26e-14!165;CL:0000837!1.26e-14!165;CL:0000037!6.24e-14!172;CL:0000566!6.24e-14!172;CL:0000988!3.74e-13!182;CL:0000860!8.22e-13!45;CL:0002031!9.99e-12!124;CL:0002087!6.53e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.20e-13;33!CL:0002057;3.20e-13;33!CL:0000473;3.23e-13;39!CL:0000234;3.23e-13;39!CL:0000576;2.64e-11;48!CL:0000766;6.95e-11;69!CL:0000763;2.10e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;3.20e-13;33!CL:0002057;3.20e-13;33!CL:0000473;3.23e-13;39!CL:0000234;3.23e-13;39!CL:0000576;2.64e-11;48!CL:0000766;6.95e-11;69!CL:0000763;2.10e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.52e-27,72;CL:0000763,1.45e-25,108;CL:0000049,1.45e-25,108;CL:0000557,1.23e-24,67;CL:0000839,1.90e-23,66;CL:0002009,7.02e-21,61;CL:0002194,1.14e-19,59;CL:0000576,1.14e-19,59;CL:0000040,1.14e-19,59;CL:0000559,1.14e-19,59;CL:0000473,4.67e-19,48;CL:0000234,4.67e-19,48;CL:0000738,1.26e-17,136;CL:0002032,1.75e-17,161;CL:0000837,1.75e-17,161;CL:0000860,6.29e-17,42;CL:0002057,6.29e-17,42;CL:0000037,1.77e-16,168;CL:0000988,6.64e-16,177;CL:0002031,3.72e-14,120;CL:0002087,6.73e-11,115 | |||
|ontology_enrichment_development_v019=CL:0002057;4.53e-12;42!CL:0000049;9.15e-08;108 | |ontology_enrichment_development_v019=CL:0002057;4.53e-12;42!CL:0000049;9.15e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.63e-20!102;UBERON:0003061!4.63e-20!102;UBERON:0007023!4.70e-19!115;UBERON:0002193!6.07e-18!112;UBERON:0002371!2.79e-16!80;UBERON:0001474!1.40e-15!86;UBERON:0004765!9.77e-14!101;UBERON:0001434!9.77e-14!101;UBERON:0002405!9.68e-10!115;UBERON:0001049!5.86e-09!57;UBERON:0005068!5.86e-09!57;UBERON:0006241!5.86e-09!57;UBERON:0007135!5.86e-09!57;UBERON:0003081!4.54e-08!216;UBERON:0003080!9.34e-08!42;UBERON:0002780!2.20e-07!41;UBERON:0001890!2.20e-07!41;UBERON:0006240!2.20e-07!41;UBERON:0002204!4.09e-07!167;UBERON:0002020!4.40e-07!34;UBERON:0003528!4.40e-07!34;UBERON:0001893!6.72e-07!34;UBERON:0002791!9.24e-07!33 | |ontology_enrichment_uberon=UBERON:0002390!4.63e-20!102;UBERON:0003061!4.63e-20!102;UBERON:0007023!4.70e-19!115;UBERON:0002193!6.07e-18!112;UBERON:0002371!2.79e-16!80;UBERON:0001474!1.40e-15!86;UBERON:0004765!9.77e-14!101;UBERON:0001434!9.77e-14!101;UBERON:0002405!9.68e-10!115;UBERON:0001049!5.86e-09!57;UBERON:0005068!5.86e-09!57;UBERON:0006241!5.86e-09!57;UBERON:0007135!5.86e-09!57;UBERON:0003081!4.54e-08!216;UBERON:0003080!9.34e-08!42;UBERON:0002780!2.20e-07!41;UBERON:0001890!2.20e-07!41;UBERON:0006240!2.20e-07!41;UBERON:0002204!4.09e-07!167;UBERON:0002020!4.40e-07!34;UBERON:0003528!4.40e-07!34;UBERON:0001893!6.72e-07!34;UBERON:0002791!9.24e-07!33 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p3@GALC | |short_description=p3@GALC | ||
}} | }} |
Latest revision as of 10:06, 16 September 2015
Short description: | p3@GALC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GALC_5end |
Coexpression cluster: | C2319_Eosinophils_large_immature_Neutrophils_small_migratory_Mast |
Association with transcript: | 0bp_to_ENST00000474294_5end |
EntrezGene: | GALC |
HGNC: | 4115 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.52e-27 | 72 |
myeloid cell | 1.45e-25 | 108 |
common myeloid progenitor | 1.45e-25 | 108 |
granulocyte monocyte progenitor cell | 1.23e-24 | 67 |
myeloid lineage restricted progenitor cell | 1.90e-23 | 66 |
macrophage dendritic cell progenitor | 7.02e-21 | 61 |
monopoietic cell | 1.14e-19 | 59 |
monocyte | 1.14e-19 | 59 |
monoblast | 1.14e-19 | 59 |
promonocyte | 1.14e-19 | 59 |
defensive cell | 4.67e-19 | 48 |
phagocyte | 4.67e-19 | 48 |
leukocyte | 1.26e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.75e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-17 | 161 |
classical monocyte | 6.29e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.29e-17 | 42 |
hematopoietic stem cell | 1.77e-16 | 168 |
hematopoietic cell | 6.64e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 3.72e-14 | 120 |
nongranular leukocyte | 6.73e-11 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.68e-23 | 98 |
blood island | 1.68e-23 | 98 |
hemolymphoid system | 3.73e-21 | 108 |
adult organism | 6.74e-20 | 114 |
bone marrow | 1.31e-19 | 76 |
bone element | 4.15e-19 | 82 |
immune system | 1.84e-17 | 93 |
skeletal element | 3.76e-16 | 90 |
skeletal system | 5.03e-15 | 100 |
lateral plate mesoderm | 4.72e-11 | 203 |
neural tube | 3.98e-09 | 56 |
neural rod | 3.98e-09 | 56 |
future spinal cord | 3.98e-09 | 56 |
neural keel | 3.98e-09 | 56 |
regional part of nervous system | 7.95e-08 | 53 |
regional part of brain | 7.95e-08 | 53 |
regional part of forebrain | 2.10e-07 | 41 |
forebrain | 2.10e-07 | 41 |
anterior neural tube | 2.10e-07 | 41 |
future forebrain | 2.10e-07 | 41 |
brain grey matter | 3.29e-07 | 34 |
gray matter | 3.29e-07 | 34 |
musculoskeletal system | 3.97e-07 | 167 |
telencephalon | 5.12e-07 | 34 |