FFCP PHASE1:Hg19::chr4:159092525..159092574,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:159092525..159092574,- to FFCP PHASE1:Hg19::chr4:159092525..159092574,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51313 | |EntrezGene=51313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=25312 | |HGNC=25312 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB527363,AM392540,AM392704_5end | |||
|cluster_id=chr4:159092525..159092574,- | |||
|coexpression_cluster_id=C2781 | |||
|description=CAGE_peak_4_at_FAM198B_5end | |||
|id=chr4:159092525..159092574,- | |||
|ontology_enrichment_celltype=CL:0002139!4.21e-16!24;CL:0000115!6.41e-16!35;CL:0000071!1.46e-12!18;CL:0002546!1.46e-12!18;CL:0002078!5.69e-12!44;CL:0000222!1.49e-10!119;CL:0000136!3.97e-08!15;CL:0002334!1.04e-07!12;CL:0000213!7.56e-07!57;CL:0000215!7.56e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.07e-19;24!CL:0000115;8.38e-18;36!CL:0000071;3.17e-15;18!CL:0002078;1.54e-11;45!CL:0002334;3.10e-09;12!CL:0000136;8.22e-09;13!CL:1000413;9.40e-08;9!CL:0002494;2.74e-07;16!CL:0002543;6.69e-07;6!CL:0000213;6.77e-07;58!CL:0000215;6.77e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.28e-21,36;CL:0002139,1.09e-19,24;CL:0002078,2.09e-16,45;CL:0000071,2.86e-15,18;CL:0002546,2.86e-15,18;CL:0000222,1.95e-11,121;CL:0000213,1.59e-10,58;CL:0000215,1.59e-10,58;CL:0000136,4.97e-10,15;CL:0002334,3.14e-09,12;CL:1000413,8.68e-08,9;CL:0002494,3.08e-07,16;CL:0002543,6.87e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.17e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!8.24e-21!84;UBERON:0003081!1.02e-18!216;UBERON:0000468!4.81e-18!659;UBERON:0000926!9.20e-18!448;UBERON:0004120!9.20e-18!448;UBERON:0006603!9.20e-18!448;UBERON:0001009!7.88e-17!113;UBERON:0004535!6.85e-16!110;UBERON:0000467!3.82e-15!625;UBERON:0000055!5.85e-15!69;UBERON:0000480!6.36e-15!626;UBERON:0001981!9.75e-14!60;UBERON:0007500!9.75e-14!60;UBERON:0004537!9.75e-14!60;UBERON:0006965!9.75e-14!60;UBERON:0002049!7.06e-13!79;UBERON:0007798!7.06e-13!79;UBERON:0003914!9.84e-13!118;UBERON:0001986!1.46e-12!18;UBERON:0004638!1.46e-12!18;UBERON:0004852!1.46e-12!18;UBERON:0007023!1.53e-12!115;UBERON:0007100!3.09e-11!27;UBERON:0000922!4.03e-11!612;UBERON:0002050!9.59e-11!605;UBERON:0005423!9.59e-11!605;UBERON:0000923!2.09e-10!604;UBERON:0005291!2.09e-10!604;UBERON:0006598!2.09e-10!604;UBERON:0002532!2.09e-10!604;UBERON:0000948!2.88e-10!24;UBERON:0005498!2.88e-10!24;UBERON:0004140!2.88e-10!24;UBERON:0009881!2.88e-10!24;UBERON:0004141!2.88e-10!24;UBERON:0003084!2.88e-10!24;UBERON:0007005!2.88e-10!24;UBERON:0004139!2.88e-10!24;UBERON:0004291!2.88e-10!24;UBERON:0006914!6.61e-10!25;UBERON:0000479!8.13e-10!787;UBERON:0000487!9.26e-10!22;UBERON:0000490!2.76e-09!138;UBERON:0004111!6.12e-09!241;UBERON:0000025!4.16e-08!194;UBERON:0002385!1.06e-07!63;UBERON:0001015!1.06e-07!63;UBERON:0000383!1.06e-07!63;UBERON:0002204!1.18e-07!167;UBERON:0001134!3.76e-07!61;UBERON:0002036!3.76e-07!61;UBERON:0003082!3.76e-07!61;UBERON:0001637!3.88e-07!42;UBERON:0003509!3.88e-07!42;UBERON:0004572!3.88e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.17e-15;18!UBERON:0001986;3.17e-15;18!UBERON:0004852;3.17e-15;18!UBERON:0006914;6.07e-13;25!UBERON:0007100;1.38e-12;25!UBERON:0000487;1.55e-12;22!UBERON:0000948;2.36e-11;22!UBERON:0000055;4.37e-09;65!UBERON:0007500;4.98e-08;56!UBERON:0001981;4.98e-08;56!UBERON:0004537;4.98e-08;56!UBERON:0003915;9.40e-08;9!UBERON:0004700;9.40e-08;9!UBERON:0001917;9.40e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.49e-29,315;UBERON:0004120,3.49e-29,315;UBERON:0006603,3.49e-29,315;UBERON:0004872,4.42e-23,83;UBERON:0003081,6.44e-21,203;UBERON:0001009,3.44e-17,112;UBERON:0000055,2.00e-16,68;UBERON:0004535,4.32e-16,109;UBERON:0003914,1.24e-15,117;UBERON:0004638,2.86e-15,18;UBERON:0001986,2.86e-15,18;UBERON:0004852,2.86e-15,18;UBERON:0007500,2.46e-14,59;UBERON:0001981,2.46e-14,59;UBERON:0004537,2.46e-14,59;UBERON:0006965,2.46e-14,59;UBERON:0007100,1.80e-13,27;UBERON:0006914,5.76e-13,25;UBERON:0002049,1.11e-12,78;UBERON:0007798,1.11e-12,78;UBERON:0000487,1.43e-12,22;UBERON:0000948,2.92e-12,24;UBERON:0005498,2.92e-12,24;UBERON:0004140,2.92e-12,24;UBERON:0009881,2.92e-12,24;UBERON:0004141,2.92e-12,24;UBERON:0003084,2.92e-12,24;UBERON:0007005,2.92e-12,24;UBERON:0004139,2.92e-12,24;UBERON:0004291,2.92e-12,24;UBERON:0000479,1.71e-10,773;UBERON:0000923,4.74e-10,560;UBERON:0010316,4.74e-10,560;UBERON:0005291,4.74e-10,560;UBERON:0006598,4.74e-10,560;UBERON:0010317,4.74e-10,560;UBERON:0002532,4.74e-10,560;UBERON:0002050,5.01e-10,564;UBERON:0003103,9.21e-10,68;UBERON:0005423,4.54e-09,581;UBERON:0000922,1.61e-08,592;UBERON:0000490,3.46e-08,148;UBERON:0003915,8.68e-08,9;UBERON:0004700,8.68e-08,9;UBERON:0001917,8.68e-08,9 | |||
|phase1_expression=9.44727572206894,8.56402095563933,14.0954404095971,5.00366491765652,10.7270662662549,5.23403114460221,0,4.42203911398782,3.65659879479774,0,0,1.74753097704138,1.58260186937072,0.990130823680373,0.994192127183747,0,0,0.730310090387373,0.975865597581014,0,0,0,0,0,0.125542639594803,0,0,0,1.18009283054671,0.383829398097213,2.01260960310899,0,0,0,0,0,0.293600439334847,1.66198622559563,2.60707781711184,0.434021741431704,1.79132379391939,2.26725566213286,2.31818010870768,0.726991193897824,0.755751887377619,0.727752183563449,2.55671940596253,2.87817521615278,1.54853185447552,1.43846196161075,0.512321413058201,0.709446689665756,1.03423704220986,3.22742341791913,0,1.88242339542605,0.818718450173537,2.47195832889593,1.53041946185451,0.962787081228281,0.639337125799041,2.30895910130701,1.39624560335142,1.27867425159808,2.32167390902867,2.26954089876456,3.11411124497787,1.7587406567972,1.0429658368404,1.95469960234605,0.605399502633369,1.84138817993782,2.21523671208619,1.05627643155971,1.4882300997553,0.838634582033504,2.80821577866238,3.00353785683013,3.2145117339416,0.855038231223746,0.59675003159727,0.91332076882317,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0,0,21.9426179682566,4.02420515822182,4.09160197899297,4.3372698286148,0,1.01392563272577,1.5905718941022,0.486634870302636,0.0945348171640679,0.221729397462564,0.351339142772504,2.35762335895883,0,0,1.62273696827342,0.870648686496336,0.664789802594326,0,0,0,9.14307073886843,10.3228151412735,3.81854551768354,5.6530794192401,9.22898759661793,10.4544855937226,5.01587919688345,39.279347393738,39.4900551582248,74.6426966465215,7.65375702507379,6.84244895146661,16.3521578557274,13.6035339727971,5.67099363517232,31.8800029974165,20.4321729089815,19.3691746431314,16.8648301212472,11.3911879148175,20.1521918323448,0,0,0,1.98788780678127,1.01304409331664,4.10468460520978,3.72887606973458,1.06400514659507,2.80338800071154,0,3.20667812942308,11.8260193451911,3.63718814588158,2.45192854670188,0.454072282934794,2.30470369792,0,0.624320153660641,2.2818872861778,0.896692083310806,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,2.94923676216055,0,0.85422955527427,2.11931901159562,0.300091096084402,0.412210116953756,0.772921620136887,1.11670113798954,1.35021065793013,0.876933046450788,0.504867548488229,0.552299391853796,0.323292113637624,0.355009592516614,0.806016785821122,0.169560592310488,0,0,0,0,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,2.78620756819187,2.16563844500876,0,0,0,0,0,0,0,0,0,14.0249536378683,1.40241773803446,0,0,0,0,3.54473944008842,0,0.737930631258681,0,0,0,0,0,0,0,0,0,1.05667824812239,3.03169540298255,3.70388410061289,10.0834700684337,0,0,3.69325509131096,3.04205544681009,3.26988557035202,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,1.03664057770386,0,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0,3.49033632546,0,2.535908257668,2.12750493267896,1.04007436911366,0,0,0,1.00084595560703,0,0.823240336780769,3.90883421152482,1.06617584622764,0,0.602878754119172,0,0.099972991182057,3.64871341923571,2.51128545716063,2.10833939483032,1.4377491329495,0,0,7.38384664004654,1.43833425785268,15.9364257283507,0,0,0,0.128343036279748,0.76228387266739,2.60279707715243,0,0,0,0,0,0,0.49076596687656,0.500170521059677,1.35632511849868,0,0,0,0,2.70851489754947,0,3.10419213877515,0.664225598535437,1.10621501125022,1.21637060255316,0.195801157462741,0,0.620304078368662,1.07857100409308,0.853820462427555,0,3.32870879020994,1.5119514666484,5.21026396419431,3.83654933220156,5.3325417942284,10.8918276867346,9.21073048320066,7.07757253031873,1.48418066444991,9.56100101576464,12.7844442225451,25.5415455202946,3.11552657510173,15.1073491997947,0.483437798366489,0,0,2.64073230778596,1.45672934405374,2.36023946926963,0,0,0,0,0,10.2360045663807,5.61309227412502,22.6711711907246,15.4227252690289,0,0,0,0,0,0,0.261435451024901,0,0,0,1.854738209659,0.183138929636687,0.165018999841176,0,0,6.42735719376638,2.22342652071881,1.84858340537573,1.84204409671355,0.827019434907183,6.55263493696469,1.74020032697074,1.78975917573812,4.98579399621729,0,0,0,0,0,1.5740617341532,2.0911118104818,1.23213432070436,0.532306030317022,2.60979897622522,0.37064843820784,2.43312307461385,0,0.316379424718726,0.953150969619124,0.511795582622668,2.56763392820352,5.09125196681499,0,2.87795932133304,5.21620356498504,3.06312246098785,0.202182481573316,1.58510321173008,2.10629228119491,0.975267478179181,3.65570234446927,0,0.545999645631943,4.94919011837995,4.52032466480971,1.10273068709225,2.65375590096488,2.63070531152258,0,1.31178950409327,1.01455188481352,0.92947049429925,0.281695602532241,0.573645408816206,1.27723753317057,0.7133421029625,0.354761064070598,4.22215270595328,11.1960263606367,0,0,0,0,0,1.97701981631236,0,0,0,0,1.01489521846434,0,0,1.42939065274673,0.822724546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| ||
|short_description=p4@FAM198B | |||
}} | }} |
Latest revision as of 10:10, 16 September 2015
Short description: | p4@FAM198B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM198B_5end |
Coexpression cluster: | C2781_heart_Endothelial_mesenchymal_Myoblast_Preadipocyte_Cardiac_Synoviocyte |
Association with transcript: | 0bp_to_AB527363, AM392540, AM392704_5end |
EntrezGene: | FAM198B |
HGNC: | 25312 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.28e-21 | 36 |
endothelial cell of vascular tree | 1.09e-19 | 24 |
meso-epithelial cell | 2.09e-16 | 45 |
blood vessel endothelial cell | 2.86e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.86e-15 | 18 |
mesodermal cell | 1.95e-11 | 121 |
lining cell | 1.59e-10 | 58 |
barrier cell | 1.59e-10 | 58 |
fat cell | 4.97e-10 | 15 |
preadipocyte | 3.14e-09 | 12 |
endothelial cell of artery | 8.68e-08 | 9 |
cardiocyte | 3.08e-07 | 16 |
vein endothelial cell | 6.87e-07 | 6 |