FFCP PHASE1:Hg19::chr13:107028897..107028945,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=728192 | |EntrezGene=728192 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42809 | |HGNC=42809 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000435024,ENST00000439790,NR_034119,uc001vqg.2,uc001vqh.2_5end | |association_with_transcript=0bp_to_ENST00000435024,ENST00000439790,NR_034119,uc001vqg.2,uc001vqh.2_5end | ||
|cluster_id=chr13:107028897..107028945,+ | |||
|description=CAGE_peak_1_at_LINC00460_5end | |description=CAGE_peak_1_at_LINC00460_5end | ||
|id=chr13:107028897..107028945,+ | |id=chr13:107028897..107028945,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.89e-09!180 | |ontology_enrichment_celltype=CL:0000055!1.89e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:0000669;5.61e-07;4!CL:0002178;5.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,5.70e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.21e-23!123;UBERON:0000475!2.47e-23!365;UBERON:0000153!8.31e-22!129;UBERON:0007811!8.31e-22!129;UBERON:0000955!2.67e-21!69;UBERON:0006238!2.67e-21!69;UBERON:0002616!2.98e-19!59;UBERON:0001017!5.44e-19!82;UBERON:0005743!1.04e-17!86;UBERON:0004121!3.13e-17!169;UBERON:0003056!6.33e-17!61;UBERON:0001893!1.61e-16!34;UBERON:0002780!2.53e-16!41;UBERON:0001890!2.53e-16!41;UBERON:0006240!2.53e-16!41;UBERON:0000924!3.96e-16!173;UBERON:0006601!3.96e-16!173;UBERON:0001869!6.24e-16!32;UBERON:0000073!6.94e-16!94;UBERON:0001016!6.94e-16!94;UBERON:0002020!7.92e-16!34;UBERON:0003528!7.92e-16!34;UBERON:0002791!9.46e-16!33;UBERON:0003080!1.26e-15!42;UBERON:0001049!3.88e-15!57;UBERON:0005068!3.88e-15!57;UBERON:0006241!3.88e-15!57;UBERON:0007135!3.88e-15!57;UBERON:0003075!5.83e-15!86;UBERON:0007284!5.83e-15!86;UBERON:0000119!6.82e-15!312;UBERON:0000481!3.37e-14!347;UBERON:0000483!8.61e-14!309;UBERON:0002346!1.92e-13!90;UBERON:0000467!7.03e-12!625;UBERON:0000480!9.46e-12!626;UBERON:0000062!3.34e-11!511;UBERON:0000064!7.22e-11!219;UBERON:0000956!1.44e-10!25;UBERON:0000203!1.44e-10!25;UBERON:0002619!1.37e-09!22;UBERON:0000468!2.76e-09!659;UBERON:0000477!3.38e-09!286;UBERON:0002420!9.39e-09!9;UBERON:0007245!9.39e-09!9;UBERON:0010009!9.39e-09!9;UBERON:0010011!9.39e-09!9;UBERON:0000454!9.39e-09!9;UBERON:0002200!2.27e-08!11;UBERON:0006876!2.27e-08!11;UBERON:0001950!2.33e-08!20;UBERON:0000923!5.18e-08!604;UBERON:0005291!5.18e-08!604;UBERON:0006598!5.18e-08!604;UBERON:0002532!5.18e-08!604;UBERON:0000914!6.42e-08!83;UBERON:0002329!6.42e-08!83;UBERON:0003077!6.42e-08!83;UBERON:0003059!6.42e-08!83;UBERON:0007282!6.42e-08!83;UBERON:0009618!6.42e-08!83;UBERON:0007285!6.42e-08!83;UBERON:0002050!6.62e-08!605;UBERON:0005423!6.62e-08!605;UBERON:0000922!3.51e-07!612;UBERON:0004111!4.94e-07!241;UBERON:0002308!5.58e-07!9;UBERON:0000125!5.58e-07!9;UBERON:0009663!6.15e-07!7;UBERON:0000486!6.37e-07!82 | |ontology_enrichment_uberon=UBERON:0000033!1.21e-23!123;UBERON:0000475!2.47e-23!365;UBERON:0000153!8.31e-22!129;UBERON:0007811!8.31e-22!129;UBERON:0000955!2.67e-21!69;UBERON:0006238!2.67e-21!69;UBERON:0002616!2.98e-19!59;UBERON:0001017!5.44e-19!82;UBERON:0005743!1.04e-17!86;UBERON:0004121!3.13e-17!169;UBERON:0003056!6.33e-17!61;UBERON:0001893!1.61e-16!34;UBERON:0002780!2.53e-16!41;UBERON:0001890!2.53e-16!41;UBERON:0006240!2.53e-16!41;UBERON:0000924!3.96e-16!173;UBERON:0006601!3.96e-16!173;UBERON:0001869!6.24e-16!32;UBERON:0000073!6.94e-16!94;UBERON:0001016!6.94e-16!94;UBERON:0002020!7.92e-16!34;UBERON:0003528!7.92e-16!34;UBERON:0002791!9.46e-16!33;UBERON:0003080!1.26e-15!42;UBERON:0001049!3.88e-15!57;UBERON:0005068!3.88e-15!57;UBERON:0006241!3.88e-15!57;UBERON:0007135!3.88e-15!57;UBERON:0003075!5.83e-15!86;UBERON:0007284!5.83e-15!86;UBERON:0000119!6.82e-15!312;UBERON:0000481!3.37e-14!347;UBERON:0000483!8.61e-14!309;UBERON:0002346!1.92e-13!90;UBERON:0000467!7.03e-12!625;UBERON:0000480!9.46e-12!626;UBERON:0000062!3.34e-11!511;UBERON:0000064!7.22e-11!219;UBERON:0000956!1.44e-10!25;UBERON:0000203!1.44e-10!25;UBERON:0002619!1.37e-09!22;UBERON:0000468!2.76e-09!659;UBERON:0000477!3.38e-09!286;UBERON:0002420!9.39e-09!9;UBERON:0007245!9.39e-09!9;UBERON:0010009!9.39e-09!9;UBERON:0010011!9.39e-09!9;UBERON:0000454!9.39e-09!9;UBERON:0002200!2.27e-08!11;UBERON:0006876!2.27e-08!11;UBERON:0001950!2.33e-08!20;UBERON:0000923!5.18e-08!604;UBERON:0005291!5.18e-08!604;UBERON:0006598!5.18e-08!604;UBERON:0002532!5.18e-08!604;UBERON:0000914!6.42e-08!83;UBERON:0002329!6.42e-08!83;UBERON:0003077!6.42e-08!83;UBERON:0003059!6.42e-08!83;UBERON:0007282!6.42e-08!83;UBERON:0009618!6.42e-08!83;UBERON:0007285!6.42e-08!83;UBERON:0002050!6.62e-08!605;UBERON:0005423!6.62e-08!605;UBERON:0000922!3.51e-07!612;UBERON:0004111!4.94e-07!241;UBERON:0002308!5.58e-07!9;UBERON:0000125!5.58e-07!9;UBERON:0009663!6.15e-07!7;UBERON:0000486!6.37e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.05e-20;32!UBERON:0002791;2.87e-18;32!UBERON:0001893;3.96e-18;34!UBERON:0003528;2.40e-16;34!UBERON:0002020;2.40e-16;34!UBERON:0002619;2.08e-14;22!UBERON:0002780;5.18e-14;41!UBERON:0001890;5.18e-14;41!UBERON:0002420;1.55e-13;9!UBERON:0007245;1.55e-13;9!UBERON:0010009;1.55e-13;9!UBERON:0010011;1.55e-13;9!UBERON:0000454;1.55e-13;9!UBERON:0000956;2.89e-12;25!UBERON:0000203;2.89e-12;25!UBERON:0001950;3.55e-12;20!UBERON:0001017;8.36e-12;75!UBERON:0009663;4.97e-10;7!UBERON:0000955;5.97e-10;68!UBERON:0000349;1.42e-09;5!UBERON:0005284;3.38e-09;5!UBERON:0000369;7.25e-09;4!UBERON:0002435;7.25e-09;4!UBERON:0000204;7.25e-09;4!UBERON:0000073;1.14e-08;53!UBERON:0002616;1.14e-08;53!UBERON:0001016;6.66e-08;83!UBERON:0000125;1.43e-07;9!UBERON:0002308;1.43e-07;9!UBERON:0000200;2.12e-07;6!UBERON:0005383;5.30e-07;3!UBERON:0005382;5.30e-07;3 | |||
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| ||
|short_description=p1@LINC00460 | |short_description=p1@LINC00460 | ||
}} | }} |
Latest revision as of 10:17, 16 September 2015
Short description: | p1@LINC00460 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00460_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000435024, ENST00000439790, NR_034119, uc001vqg.2, uc001vqh.2_5end |
EntrezGene: | LINC00460 |
HGNC: | 42809 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 5.70e-07 | 3 |