FFCP PHASE1:Hg19::chr1:11863171..11863195,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4524 | |EntrezGene=4524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7436 | |HGNC=7436 | ||
|TSSclassifier=strong | |||
|UniProt=P42898 | |UniProt=P42898 | ||
|association_with_transcript=106bp_to_ENST00000376592_5end | |association_with_transcript=106bp_to_ENST00000376592_5end | ||
|cluster_id=chr1:11863171..11863195,- | |||
|coexpression_cluster_id=C1444 | |coexpression_cluster_id=C1444 | ||
|description=CAGE_peak_7_at_MTHFR_5end | |description=CAGE_peak_7_at_MTHFR_5end | ||
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|ontology_enrichment_celltype=CL:0000066!2.59e-13!254;CL:0002076!1.19e-07!43;CL:0002368!5.14e-07!13;CL:1000497!6.42e-07!18;CL:0002518!6.42e-07!18 | |ontology_enrichment_celltype=CL:0000066!2.59e-13!254;CL:0002076!1.19e-07!43;CL:0002368!5.14e-07!13;CL:1000497!6.42e-07!18;CL:0002518!6.42e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.48e-19;5!CL:1000507;3.73e-12;10!CL:1000494;3.73e-12;10!CL:0000239;3.27e-11;3!CL:1000615;3.27e-11;3!CL:0002306;3.27e-11;3!CL:1000449;1.06e-10;15!CL:0000990;1.09e-10;8!CL:0002681;5.12e-10;12!CL:0002584;5.12e-10;12!CL:0002202;1.12e-09;9!CL:0002632;1.12e-09;9!CL:1000497;2.53e-09;17!CL:0002518;2.53e-09;17!CL:0002368;3.40e-09;13!CL:0001014;9.00e-09;2!CL:0001016;9.00e-09;2!CL:0000451;1.15e-08;10!CL:0002076;2.67e-08;42!CL:0002536;8.89e-08;2 | |ontology_enrichment_celltype_v019=CL:0000453;1.48e-19;5!CL:1000507;3.73e-12;10!CL:1000494;3.73e-12;10!CL:0000239;3.27e-11;3!CL:1000615;3.27e-11;3!CL:0002306;3.27e-11;3!CL:1000449;1.06e-10;15!CL:0000990;1.09e-10;8!CL:0002681;5.12e-10;12!CL:0002584;5.12e-10;12!CL:0002202;1.12e-09;9!CL:0002632;1.12e-09;9!CL:1000497;2.53e-09;17!CL:0002518;2.53e-09;17!CL:0002368;3.40e-09;13!CL:0001014;9.00e-09;2!CL:0001016;9.00e-09;2!CL:0000451;1.15e-08;10!CL:0002076;2.67e-08;42!CL:0002536;8.89e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.59e-19,5;CL:1000507,6.75e-12,10;CL:1000494,6.75e-12,10;CL:0000239,4.00e-11,3;CL:1000615,4.00e-11,3;CL:0002306,4.00e-11,3;CL:0000990,1.14e-10,8;CL:1000449,1.78e-10,15;CL:0002076,7.85e-10,42;CL:0002202,9.67e-10,9;CL:0002632,9.67e-10,9;CL:0002681,9.80e-10,12;CL:0002584,9.80e-10,12;CL:0002368,2.65e-09,13;CL:1000497,3.98e-09,17;CL:0002518,3.98e-09,17;CL:0001014,9.59e-09,2;CL:0001016,9.59e-09,2;CL:0000451,1.18e-08,10;CL:0000066,1.23e-08,253;CL:0002536,1.55e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;8.89e-08;2 | |ontology_enrichment_disease_v019=DOID:114;8.89e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,7.01e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001008!5.96e-10!45;UBERON:0006554!1.83e-09!44;UBERON:0002113!5.96e-08!27;UBERON:0003918!5.96e-08!27;UBERON:0005095!5.96e-08!27;UBERON:0007687!5.96e-08!27;UBERON:0004119!4.92e-07!169;UBERON:0000925!4.92e-07!169;UBERON:0006595!4.92e-07!169 | |ontology_enrichment_uberon=UBERON:0001008!5.96e-10!45;UBERON:0006554!1.83e-09!44;UBERON:0002113!5.96e-08!27;UBERON:0003918!5.96e-08!27;UBERON:0005095!5.96e-08!27;UBERON:0007687!5.96e-08!27;UBERON:0004119!4.92e-07!169;UBERON:0000925!4.92e-07!169;UBERON:0006595!4.92e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.73e-12;10!UBERON:0009773;3.73e-12;10!UBERON:0001231;3.73e-12;10!UBERON:0004810;3.73e-12;10!UBERON:0006853;3.27e-11;3!UBERON:0007685;3.27e-11;3!UBERON:0004134;3.27e-11;3!UBERON:0006555;1.06e-10;15!UBERON:0004819;1.06e-10;15!UBERON:0001285;1.06e-10;15!UBERON:0007684;1.06e-10;15!UBERON:0001225;5.12e-10;12!UBERON:0008987;5.12e-10;12!UBERON:0000305;5.83e-08;7!UBERON:0006554;7.01e-08;30!UBERON:0001008;7.01e-08;30!UBERON:0001851;7.04e-08;15!UBERON:0000353;7.04e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0004211;3.73e-12;10!UBERON:0009773;3.73e-12;10!UBERON:0001231;3.73e-12;10!UBERON:0004810;3.73e-12;10!UBERON:0006853;3.27e-11;3!UBERON:0007685;3.27e-11;3!UBERON:0004134;3.27e-11;3!UBERON:0006555;1.06e-10;15!UBERON:0004819;1.06e-10;15!UBERON:0001285;1.06e-10;15!UBERON:0007684;1.06e-10;15!UBERON:0001225;5.12e-10;12!UBERON:0008987;5.12e-10;12!UBERON:0000305;5.83e-08;7!UBERON:0006554;7.01e-08;30!UBERON:0001008;7.01e-08;30!UBERON:0001851;7.04e-08;15!UBERON:0000353;7.04e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,6.75e-12,10;UBERON:0006853,4.00e-11,3;UBERON:0007685,4.00e-11,3;UBERON:0004134,4.00e-11,3;UBERON:0004211,1.78e-10,15;UBERON:0009773,1.78e-10,15;UBERON:0001231,1.78e-10,15;UBERON:0001285,1.78e-10,15;UBERON:0007684,1.78e-10,15;UBERON:0004208,1.78e-10,15;UBERON:0006555,9.27e-10,16;UBERON:0004819,9.27e-10,16;UBERON:0001225,9.80e-10,12;UBERON:0008987,9.80e-10,12;UBERON:0005631,3.32e-08,14;UBERON:0000158,3.32e-08,14;UBERON:0000305,8.87e-08,7;UBERON:0001851,1.17e-07,15;UBERON:0000353,1.17e-07,15;UBERON:0004871,8.20e-07,8;UBERON:0006554,8.24e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.09340350391728,1.09220686065086,1.31883489114227,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0,0,0,0,0.309632246632152,1.83884244895785,1.204823675113,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0,0.419317291016752,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,0,0,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0,0,0.382273228125229,1.32171328579026,0,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,1.0247305578054,0.130059347559878,0.657751618414705,0.276350017785848,0,0.14828656316206,0,1.04535523804977,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0,0.392937226493138,0.728590576585084,1.85392221392215,0,0.348259474598534,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0.732186172644509,0,0,0.17859945656816,0,0,0,0,0,0,0,3.05265836499774,0.496971951695318,0,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0.910161361938026,0.718618141816238,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,2.51239109112286,0.272746120590835,2.29443676311203,0.243947412259191,0.265059536642971,0.116193942869518,0.725627385107593,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0.674338760312407,0.482022059766964,0.330881918197182,0.217879444092406,0.237270619111097,0.404493924480493,0.98110732562673,0.769494313892781,0,0,0,0,0,0,0,0,0.368965315629341,0,1.31700342490351,0,0.301586917234893,2.31471112896324,0,1.03993478527958,0,0,0,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0.297262324577456,0,0.503946384596579,1.55952606966625,0.0895585227028483,0.290633938513962,2.68367875415648,0,0.44024217006613,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0.215714200818617,0.106727557803444,1.21251028578504,3.32870879020994,0.907170879989041,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.459257792658427,0,0.131124414959424,0.902399225814824,1.15523005656622,0,2.92278449306521,0.949964660035881,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,1.27438136522519,2.49322802678617,1.34324852833307,0.657779629937804,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0.826424576804891,0.768760269460425,1.53135254993501,0.4046311234222,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0.255897791311334,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,1.44333169088268,2.68120910214315,0,0.376575203107117,0.86101074534246,1.68471475667626,0.886860307073351,1.83778720165568,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0.980160863924127,0,0,0,0,0,0.5745161103971,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0.23874448473769,0.296964680832639,1.53580351049616,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,2.03402920234213,0,0,0,0,0,1.32656082487949,0,0.110579259931225,0,0,0,0.278847488557207,0,0,0.46112780877612,0.0897576444097721,1.52106320690811,0,0.274792780205587,0,0,0,0.498635045700469,3.38393490925771,0.784250137270958,1.51039428278258,1.51802986179348,0.158936578980379,0.632994193584081,0.816164040795739,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0.394584402849391,0,0,0.252746318513952,0,0.103688191397247,0,0,0,0,0.569219092059585,0,0,0,0.261177619741208,0.17472666824203,0.343972064943233,1.16107597546902,1.09633975629278,0.903270027585302,0,1.6768664071385,0,0,0.397429223405979,0,1.56441106187842,0.240476460754601,1.06726497369676,0.799238438328521,0,0,0,0,0.49701014226173,1.64985824231757,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0.558564802544508,0.458320848023367,0,1.59743200399193,1.28767814440971,0.446342914883745,1.47803639470798,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0.0846733320657845,0,0.136203406111576,0,0,0,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| ||
|short_description=p7@MTHFR | |short_description=p7@MTHFR | ||
}} | }} |
Latest revision as of 10:56, 16 September 2015
Short description: | p7@MTHFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MTHFR_5end |
Coexpression cluster: | C1444_immature_migratory_CD14_amniotic_Eosinophils_CD19_Neutrophils |
Association with transcript: | 106bp_to_ENST00000376592_5end |
EntrezGene: | MTHFR |
HGNC: | 7436 |
UniProt: | P42898 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.59e-19 | 5 |
kidney tubule cell | 6.75e-12 | 10 |
nephron tubule epithelial cell | 6.75e-12 | 10 |
brush border epithelial cell | 4.00e-11 | 3 |
kidney cortex tubule cell | 4.00e-11 | 3 |
epithelial cell of proximal tubule | 4.00e-11 | 3 |
conventional dendritic cell | 1.14e-10 | 8 |
epithelial cell of nephron | 1.78e-10 | 15 |
endo-epithelial cell | 7.85e-10 | 42 |
epithelial cell of tracheobronchial tree | 9.67e-10 | 9 |
epithelial cell of lower respiratory tract | 9.67e-10 | 9 |
kidney cortical cell | 9.80e-10 | 12 |
renal cortical epithelial cell | 9.80e-10 | 12 |
respiratory epithelial cell | 2.65e-09 | 13 |
kidney cell | 3.98e-09 | 17 |
kidney epithelial cell | 3.98e-09 | 17 |
CD1a-positive Langerhans cell | 9.59e-09 | 2 |
immature CD1a-positive Langerhans cell | 9.59e-09 | 2 |
dendritic cell | 1.18e-08 | 10 |
epithelial cell | 1.23e-08 | 253 |
amniotic epithelial cell | 1.55e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 6.75e-12 | 10 |
renal cortex tubule | 4.00e-11 | 3 |
region of nephron tubule | 4.00e-11 | 3 |
proximal tubule | 4.00e-11 | 3 |
nephron epithelium | 1.78e-10 | 15 |
renal tubule | 1.78e-10 | 15 |
nephron tubule | 1.78e-10 | 15 |
nephron | 1.78e-10 | 15 |
uriniferous tubule | 1.78e-10 | 15 |
nephrogenic mesenchyme | 1.78e-10 | 15 |
excretory tube | 9.27e-10 | 16 |
kidney epithelium | 9.27e-10 | 16 |
cortex of kidney | 9.80e-10 | 12 |
renal parenchyma | 9.80e-10 | 12 |
extraembryonic membrane | 3.32e-08 | 14 |
membranous layer | 3.32e-08 | 14 |
amnion | 8.87e-08 | 7 |
cortex | 1.17e-07 | 15 |
parenchyma | 1.17e-07 | 15 |
somatic layer of lateral plate mesoderm | 8.20e-07 | 8 |
urinary system structure | 8.24e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.01e-08 | 2 |