FFCP PHASE1:Hg19::chr2:242576431..242576458,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51078 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23187 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=196bp_to_uc002wbt.2_5end | |||
|cluster_id=chr2:242576431..242576458,- | |||
|description=CAGE_peak_3_at_THAP4_5end | |||
|id=chr2:242576431..242576458,- | |||
|ontology_enrichment_celltype=CL:0000548!7.72e-20!679;CL:0000004!7.72e-20!679;CL:0000255!7.72e-20!679;CL:0000012!7.29e-19!682;CL:0000144!3.00e-17!625;CL:0002371!9.47e-17!591;CL:0000220!3.07e-16!246;CL:0002321!1.38e-15!248;CL:0000222!1.48e-14!119;CL:0000055!2.43e-13!180;CL:0000183!1.84e-10!59;CL:0000003!3.21e-09!722;CL:0000680!4.90e-09!57;CL:0000056!4.90e-09!57;CL:0000355!4.90e-09!57;CL:0000187!7.46e-09!54;CL:0000063!7.87e-09!578;CL:0000192!2.23e-08!42;CL:0000514!2.23e-08!42;CL:0000057!1.74e-07!75;CL:0000066!2.48e-07!254;CL:0000359!7.66e-07!32;CL:0000213!8.64e-07!57;CL:0000215!8.64e-07!57;CL:0000076!9.46e-07!62 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.02e-16,250;CL:0000222,2.91e-15,121;CL:0000680,1.96e-09,58;CL:0000056,1.96e-09,58;CL:0000355,1.96e-09,58;CL:0000187,3.09e-09,55;CL:0000192,9.98e-09,43;CL:0000514,9.98e-09,43;CL:0000057,2.69e-07,76;CL:0000076,3.34e-07,63;CL:0000359,5.96e-07,32;CL:0000213,6.55e-07,58;CL:0000215,6.55e-07,58;CL:0000393,7.63e-07,61;CL:0000211,7.63e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.80e-12!118;UBERON:0003104!3.81e-11!238;UBERON:0009142!3.81e-11!238;UBERON:0001981!4.72e-11!60;UBERON:0007500!4.72e-11!60;UBERON:0004537!4.72e-11!60;UBERON:0006965!4.72e-11!60;UBERON:0000926!8.09e-11!448;UBERON:0004120!8.09e-11!448;UBERON:0006603!8.09e-11!448;UBERON:0004872!1.81e-10!84;UBERON:0001637!2.42e-10!42;UBERON:0003509!2.42e-10!42;UBERON:0004572!2.42e-10!42;UBERON:0000055!2.49e-10!69;UBERON:0000486!4.21e-10!82;UBERON:0004290!7.50e-10!70;UBERON:0002049!1.17e-09!79;UBERON:0007798!1.17e-09!79;UBERON:0005256!2.96e-09!143;UBERON:0002100!3.40e-09!216;UBERON:0000914!1.10e-08!83;UBERON:0002329!1.10e-08!83;UBERON:0003077!1.10e-08!83;UBERON:0003059!1.10e-08!83;UBERON:0007282!1.10e-08!83;UBERON:0009618!1.10e-08!83;UBERON:0007285!1.10e-08!83;UBERON:0003102!7.02e-08!95;UBERON:0001134!1.04e-07!61;UBERON:0002036!1.04e-07!61;UBERON:0003082!1.04e-07!61;UBERON:0000490!1.32e-07!138;UBERON:0002385!1.38e-07!63;UBERON:0001015!1.38e-07!63;UBERON:0000383!1.38e-07!63;UBERON:0000468!2.36e-07!659;UBERON:0000481!2.36e-07!347;UBERON:0004573!2.44e-07!33;UBERON:0004571!2.44e-07!33;UBERON:0000475!3.01e-07!365;UBERON:0000923!5.15e-07!604;UBERON:0005291!5.15e-07!604;UBERON:0006598!5.15e-07!604;UBERON:0002532!5.15e-07!604;UBERON:0000119!7.09e-07!312;UBERON:0002050!7.51e-07!605;UBERON:0005423!7.51e-07!605;UBERON:0000467!8.90e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.21e-08;42!UBERON:0003509;6.21e-08;42!UBERON:0004572;6.21e-08;42!UBERON:0004573;7.09e-07;33!UBERON:0004571;7.09e-07;33!UBERON:0007500;8.79e-07;56!UBERON:0001981;8.79e-07;56!UBERON:0004537;8.79e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.04e-12,117;UBERON:0007503,7.66e-12,78;UBERON:0007500,7.67e-12,59;UBERON:0001981,7.67e-12,59;UBERON:0004537,7.67e-12,59;UBERON:0006965,7.67e-12,59;UBERON:0000055,3.71e-11,68;UBERON:0004872,8.63e-11,83;UBERON:0001637,1.11e-10,42;UBERON:0003509,1.11e-10,42;UBERON:0004572,1.11e-10,42;UBERON:0002329,2.58e-10,71;UBERON:0003059,2.58e-10,71;UBERON:0007282,2.58e-10,71;UBERON:0004290,2.58e-10,71;UBERON:0009618,2.58e-10,71;UBERON:0000486,2.87e-10,83;UBERON:0002049,2.88e-10,78;UBERON:0007798,2.88e-10,78;UBERON:0007524,4.49e-10,73;UBERON:0005256,7.09e-10,122;UBERON:0003104,7.19e-10,160;UBERON:0009142,7.19e-10,160;UBERON:0003077,7.67e-10,72;UBERON:0007285,7.67e-10,72;UBERON:0000490,8.51e-10,148;UBERON:0002100,2.68e-09,199;UBERON:0003102,6.11e-08,99;UBERON:0001134,6.75e-08,62;UBERON:0002036,6.75e-08,62;UBERON:0003082,6.75e-08,62;UBERON:0002385,1.43e-07,64;UBERON:0001015,1.43e-07,64;UBERON:0000383,1.43e-07,64;UBERON:0004573,1.63e-07,33;UBERON:0004571,1.63e-07,33;UBERON:0000119,4.11e-07,309 | |||
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| |||
|short_description=p3@THAP4 | |||
}} |
Latest revision as of 10:59, 16 September 2015
Short description: | p3@THAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_THAP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 196bp_to_uc002wbt.2_5end |
EntrezGene: | THAP4 |
HGNC: | 23187 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.02e-16 | 250 |
mesodermal cell | 2.91e-15 | 121 |
muscle precursor cell | 1.96e-09 | 58 |
myoblast | 1.96e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.96e-09 | 58 |
muscle cell | 3.09e-09 | 55 |
smooth muscle cell | 9.98e-09 | 43 |
smooth muscle myoblast | 9.98e-09 | 43 |
fibroblast | 2.69e-07 | 76 |
squamous epithelial cell | 3.34e-07 | 63 |
vascular associated smooth muscle cell | 5.96e-07 | 32 |
lining cell | 6.55e-07 | 58 |
barrier cell | 6.55e-07 | 58 |
electrically responsive cell | 7.63e-07 | 61 |
electrically active cell | 7.63e-07 | 61 |