FFCP PHASE1:Hg19::chr14:90864738..90864762,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=801 | |EntrezGene=801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1442 | |HGNC=1442 | ||
|TSSclassifier=strong | |||
|UniProt=Q96HY3 | |UniProt=Q96HY3 | ||
|association_with_transcript=129bp_to_uc001xym.1_5end | |association_with_transcript=129bp_to_uc001xym.1_5end | ||
|cluster_id=chr14:90864738..90864762,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_39_at_CALM1_5end | |description=CAGE_peak_39_at_CALM1_5end | ||
|id=chr14:90864738..90864762,+ | |id=chr14:90864738..90864762,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.14e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.94e-13,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4556;1.05e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.10e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.80e-16!57;UBERON:0005068!3.80e-16!57;UBERON:0006241!3.80e-16!57;UBERON:0007135!3.80e-16!57;UBERON:0000073!8.52e-16!94;UBERON:0001016!8.52e-16!94;UBERON:0001017!6.34e-15!82;UBERON:0002780!7.39e-15!41;UBERON:0001890!7.39e-15!41;UBERON:0006240!7.39e-15!41;UBERON:0005743!1.74e-14!86;UBERON:0001893!2.31e-14!34;UBERON:0003080!2.62e-14!42;UBERON:0003075!1.77e-13!86;UBERON:0007284!1.77e-13!86;UBERON:0002791!2.55e-13!33;UBERON:0002346!2.56e-13!90;UBERON:0000955!5.12e-13!69;UBERON:0006238!5.12e-13!69;UBERON:0002616!5.37e-13!59;UBERON:0002020!1.07e-12!34;UBERON:0003528!1.07e-12!34;UBERON:0001869!2.01e-12!32;UBERON:0003056!9.32e-11!61;UBERON:0007023!4.26e-10!115;UBERON:0000924!2.52e-09!173;UBERON:0006601!2.52e-09!173;UBERON:0001950!2.79e-09!20;UBERON:0004121!2.86e-09!169;UBERON:0002420!1.17e-08!9;UBERON:0007245!1.17e-08!9;UBERON:0010009!1.17e-08!9;UBERON:0010011!1.17e-08!9;UBERON:0000454!1.17e-08!9;UBERON:0000153!1.76e-08!129;UBERON:0007811!1.76e-08!129;UBERON:0002619!4.04e-08!22;UBERON:0000033!6.43e-08!123;UBERON:0000956!7.01e-08!25;UBERON:0000203!7.01e-08!25;UBERON:0002308!8.61e-07!9;UBERON:0000125!8.61e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!3.80e-16!57;UBERON:0005068!3.80e-16!57;UBERON:0006241!3.80e-16!57;UBERON:0007135!3.80e-16!57;UBERON:0000073!8.52e-16!94;UBERON:0001016!8.52e-16!94;UBERON:0001017!6.34e-15!82;UBERON:0002780!7.39e-15!41;UBERON:0001890!7.39e-15!41;UBERON:0006240!7.39e-15!41;UBERON:0005743!1.74e-14!86;UBERON:0001893!2.31e-14!34;UBERON:0003080!2.62e-14!42;UBERON:0003075!1.77e-13!86;UBERON:0007284!1.77e-13!86;UBERON:0002791!2.55e-13!33;UBERON:0002346!2.56e-13!90;UBERON:0000955!5.12e-13!69;UBERON:0006238!5.12e-13!69;UBERON:0002616!5.37e-13!59;UBERON:0002020!1.07e-12!34;UBERON:0003528!1.07e-12!34;UBERON:0001869!2.01e-12!32;UBERON:0003056!9.32e-11!61;UBERON:0007023!4.26e-10!115;UBERON:0000924!2.52e-09!173;UBERON:0006601!2.52e-09!173;UBERON:0001950!2.79e-09!20;UBERON:0004121!2.86e-09!169;UBERON:0002420!1.17e-08!9;UBERON:0007245!1.17e-08!9;UBERON:0010009!1.17e-08!9;UBERON:0010011!1.17e-08!9;UBERON:0000454!1.17e-08!9;UBERON:0000153!1.76e-08!129;UBERON:0007811!1.76e-08!129;UBERON:0002619!4.04e-08!22;UBERON:0000033!6.43e-08!123;UBERON:0000956!7.01e-08!25;UBERON:0000203!7.01e-08!25;UBERON:0002308!8.61e-07!9;UBERON:0000125!8.61e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0007190;6.72e-26;1!UBERON:0000988;1.47e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007190,9.79e-26,1;UBERON:0000988,1.41e-09,3;UBERON:0001017,1.11e-07,81;UBERON:0001016,6.05e-07,89 | |||
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| ||
|short_description=p39@CALM1 | |short_description=p39@CALM1 | ||
}} | }} |
Latest revision as of 12:11, 16 September 2015
Short description: | p39@CALM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_CALM1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 129bp_to_uc001xym.1_5end |
EntrezGene: | CALM1 |
HGNC: | 1442 |
UniProt: | Q96HY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.94e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
paracentral gyrus | 9.79e-26 | 1 |
pons | 1.41e-09 | 3 |
central nervous system | 1.11e-07 | 81 |
nervous system | 6.05e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.10e-09 | 3 |