FFCP PHASE1:Hg19::chr11:125657963..125657969,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100169851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35426 | |||
|TSSclassifier=strong | |||
|UniProt=B3GLJ2 | |||
|association_with_transcript=-36bp_to_ENST00000445202,NM_001129883,uc009zbs.2_5end | |||
|cluster_id=chr11:125657963..125657969,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_2_at_PATE3_5end | |||
|id=chr11:125657963..125657969,+ | |||
|ontology_enrichment_celltype=CL:0002580!1.41e-09!3;CL:0000306!1.92e-07!4;CL:0002222!1.92e-07!4;CL:0002224!1.92e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.61e-34;2!UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.36e-36!11;UBERON:0006947!2.81e-34!3;UBERON:0004054!2.81e-34!3;UBERON:0001301!2.16e-26!1;UBERON:0001000!2.78e-26!1;UBERON:0005352!2.78e-26!1;UBERON:0005904!5.23e-26!4;UBERON:0002336!1.26e-25!1;UBERON:0001018!1.26e-25!1;UBERON:0002473!1.26e-25!1;UBERON:0005340!1.26e-25!1;UBERON:0002316!1.26e-25!1;UBERON:0003544!1.26e-25!1;UBERON:0001020!1.26e-25!1;UBERON:0005970!1.26e-25!1;UBERON:0002437!1.26e-25!1;UBERON:0003101!1.33e-18!22;UBERON:0000079!1.33e-18!22;UBERON:0005162!1.55e-13!2;UBERON:0000122!1.55e-13!2;UBERON:0000473!1.94e-13!8;UBERON:0003133!9.00e-09!48;UBERON:0010077!1.92e-07!4;UBERON:0005389!1.92e-07!4;UBERON:0000484!1.92e-07!4;UBERON:0002546!1.92e-07!4;UBERON:0000965!1.92e-07!4;UBERON:0001803!1.92e-07!4;UBERON:0003073!1.92e-07!4;UBERON:0005426!1.92e-07!4;UBERON:0005156!3.33e-07!59;UBERON:0000990!3.33e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.79e-88;3!UBERON:0004054;7.79e-88;3!UBERON:0001301;1.23e-66;1!UBERON:0005904;2.83e-66;4!UBERON:0001000;3.34e-66;1!UBERON:0005352;3.34e-66;1!UBERON:0003135;2.16e-54;11!UBERON:0003101;7.08e-28;22!UBERON:0000079;7.08e-28;22!UBERON:0000058;2.22e-27;10!UBERON:0004175;1.05e-13;21!UBERON:0003133;1.50e-10;44!UBERON:0000473;1.41e-09;8!UBERON:0005156;9.98e-08;59!UBERON:0000990;9.98e-08;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.24e-88,3;UBERON:0004054,6.24e-88,3;UBERON:0001301,1.23e-66,1;UBERON:0001000,2.39e-66,1;UBERON:0005352,2.39e-66,1;UBERON:0005904,2.40e-66,4;UBERON:0003135,2.16e-54,11;UBERON:0003101,7.08e-28,22;UBERON:0000079,7.08e-28,22;UBERON:0000058,4.91e-15,19;UBERON:0003133,2.00e-13,48;UBERON:0004175,1.03e-11,25;UBERON:0005156,3.99e-11,59;UBERON:0000990,3.99e-11,59;UBERON:0005103,1.24e-09,8;UBERON:0000083,1.24e-09,8;UBERON:0009201,1.24e-09,8;UBERON:0006553,1.24e-09,8;UBERON:0003074,1.24e-09,8;UBERON:0003060,1.24e-09,8;UBERON:0000473,1.47e-09,8;UBERON:0000080,1.04e-08,9;UBERON:0002120,1.04e-08,9;UBERON:0004875,1.04e-08,9;UBERON:0005721,1.04e-08,9;UBERON:0005754,1.04e-08,9;UBERON:0007297,1.04e-08,9;UBERON:0004876,2.32e-07,11;UBERON:0003887,7.48e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3650135349799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13668047327359,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@PATE3 | |||
}} |
Latest revision as of 13:35, 16 September 2015
Short description: | p2@PATE3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PATE3_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -36bp_to_ENST00000445202, NM_001129883, uc009zbs.2_5end |
EntrezGene: | PATE3 |
HGNC: | 35426 |
UniProt: | B3GLJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.24e-88 | 3 |
internal male genitalia | 6.24e-88 | 3 |
epididymis | 1.23e-66 | 1 |
vas deferens | 2.39e-66 | 1 |
spermatic cord | 2.39e-66 | 1 |
duct of male reproductive system | 2.40e-66 | 4 |
male reproductive organ | 2.16e-54 | 11 |
male organism | 7.08e-28 | 22 |
male reproductive system | 7.08e-28 | 22 |
duct | 4.91e-15 | 19 |
reproductive organ | 2.00e-13 | 48 |
internal genitalia | 1.03e-11 | 25 |
reproductive structure | 3.99e-11 | 59 |
reproductive system | 3.99e-11 | 59 |
mesonephric epithelium | 1.24e-09 | 8 |
mesonephric tubule | 1.24e-09 | 8 |
nephric duct | 1.24e-09 | 8 |
renal duct | 1.24e-09 | 8 |
mesonephric duct | 1.24e-09 | 8 |
pronephric duct | 1.24e-09 | 8 |
testis | 1.47e-09 | 8 |
mesonephros | 1.04e-08 | 9 |
pronephros | 1.04e-08 | 9 |
nephrogenic cord | 1.04e-08 | 9 |
pronephric mesoderm | 1.04e-08 | 9 |
rostral part of nephrogenic cord | 1.04e-08 | 9 |
presumptive pronephric mesoderm | 1.04e-08 | 9 |
urogenital ridge | 2.32e-07 | 11 |
intraembryonic coelom | 7.48e-07 | 12 |