FFCP PHASE1:Hg19::chr9:139876112..139876142,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401562 | |EntrezGene=401562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34436 | |HGNC=34436 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z3E7 | |UniProt=F2Z3E7 | ||
|association_with_transcript=-213bp_to_ENST00000482657_5end | |association_with_transcript=-213bp_to_ENST00000482657_5end | ||
|cluster_id=chr9:139876112..139876142,+ | |||
|coexpression_cluster_id=C485 | |||
|description=CAGE_peak_2_at_LCNL1_5end | |description=CAGE_peak_2_at_LCNL1_5end | ||
|id=chr9:139876112..139876142,+ | |id=chr9:139876112..139876142,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002575;3.42e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,3.43e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.82e-15;82!UBERON:0006241;3.79e-11;3!UBERON:0003057;3.79e-11;3!UBERON:0005062;4.03e-08;4!UBERON:0007284;4.03e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;5.56e-26;34!UBERON:0002020;5.56e-26;34!UBERON:0002791;7.17e-26;32!UBERON:0002780;3.35e-25;41!UBERON:0001890;3.35e-25;41!UBERON:0000073;8.99e-24;53!UBERON:0002616;8.99e-24;53!UBERON:0001893;9.33e-24;34!UBERON:0001869;3.22e-23;32!UBERON:0002619;1.88e-20;22!UBERON:0007023;7.37e-20;114!UBERON:0000125;7.90e-18;9!UBERON:0002308;7.90e-18;9!UBERON:0002420;8.31e-18;9!UBERON:0007245;8.31e-18;9!UBERON:0010009;8.31e-18;9!UBERON:0010011;8.31e-18;9!UBERON:0000454;8.31e-18;9!UBERON:0000956;9.63e-18;25!UBERON:0000203;9.63e-18;25!UBERON:0001017;1.15e-17;75!UBERON:0001016;3.58e-17;83!UBERON:0001950;4.69e-16;20!UBERON:0000955;4.51e-15;68!UBERON:0009663;2.99e-12;7!UBERON:0004732;7.96e-12;13!UBERON:0002240;3.79e-11;3!UBERON:0005174;3.79e-11;3!UBERON:0001137;3.79e-11;3!UBERON:0004151;6.69e-11;3!UBERON:0003978;1.06e-10;3!UBERON:0000946;1.06e-10;3!UBERON:0000349;1.13e-10;5!UBERON:0002021;2.79e-10;5!UBERON:0004733;1.98e-09;12!UBERON:0002028;1.98e-09;12!UBERON:0002298;4.30e-09;6!UBERON:0005162;6.12e-08;2!UBERON:0000122;6.12e-08;2!UBERON:0001875;6.33e-08;2!UBERON:0006514;6.33e-08;2!UBERON:0001894;6.67e-08;7!UBERON:0001897;6.89e-08;2!UBERON:0010225;6.89e-08;2!UBERON:0002081;7.75e-08;2!UBERON:0002133;8.87e-08;2!UBERON:0002148;1.20e-07;2!UBERON:0006331;1.20e-07;2!UBERON:0009662;1.20e-07;2!UBERON:0001876;1.28e-07;2!UBERON:0001871;2.06e-07;6!UBERON:0001954;2.20e-07;2!UBERON:0003022;2.20e-07;2!UBERON:0002421;2.20e-07;2!UBERON:0002600;2.20e-07;2!UBERON:0011216;2.29e-07;132!UBERON:0010314;2.50e-07;132!UBERON:0002702;3.03e-07;2!UBERON:0002360;5.45e-07;2!UBERON:0000094;5.45e-07;2!UBERON:0010743;5.45e-07;2!UBERON:0003135;5.84e-07;11 | |||
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|short_description=p2@LCNL1 | |short_description=p2@LCNL1 | ||
}} | }} |
Latest revision as of 14:48, 16 September 2015
Short description: | p2@LCNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LCNL1_5end |
Coexpression cluster: | C485_Pericytes_retina_cerebral_Dendritic_testis_corpus_spinal |
Association with transcript: | -213bp_to_ENST00000482657_5end |
EntrezGene: | LCNL1 |
HGNC: | 34436 |
UniProt: | F2Z3E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 3.43e-08 | 2 |