FFCP PHASE1:Hg19::chr5:159343995..159344006,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147 | |EntrezGene=147 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=278 | |HGNC=278 | ||
|TSSclassifier=strong | |||
|UniProt=P35368 | |UniProt=P35368 | ||
|association_with_transcript=82bp_to_L31773_5end | |association_with_transcript=82bp_to_L31773_5end | ||
|cluster_id=chr5:159343995..159344006,+ | |||
|coexpression_cluster_id=C255 | |||
|description=CAGE_peak_5_at_ADRA1B_5end | |description=CAGE_peak_5_at_ADRA1B_5end | ||
|id=chr5:159343995..159344006,+ | |id=chr5:159343995..159344006,+ | ||
|ontology_enrichment_celltype=CL:0002195!1.29e-08!2;CL:0002571!1.29e-08!2 | |ontology_enrichment_celltype=CL:0002195!1.29e-08!2;CL:0002571!1.29e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002195;1.17e-17;2!CL:0002262;1.17e-17;2!CL:1000398;1.17e-17;2!CL:0002571;1.17e-17;2!CL:0002149;7.80e-07;6!CL:0002255;7.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,1.07e-17,2;CL:1000398,1.07e-17,2;CL:0002195,1.27e-17,2;CL:0002571,1.27e-17,2;CL:0002149,8.02e-07,6;CL:0002255,8.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.84e-14;10!UBERON:0007687;2.84e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;3.05e-34;1!DOID:3350;7.05e-18;2!DOID:3001;7.80e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.58e-34,1;DOID:3350,6.48e-18,2;DOID:3001,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002616!6.57e-18!59;UBERON:0000955!9.75e-18!69;UBERON:0006238!9.75e-18!69;UBERON:0002780!2.15e-17!41;UBERON:0001890!2.15e-17!41;UBERON:0006240!2.15e-17!41;UBERON:0003080!6.72e-17!42;UBERON:0001049!9.66e-17!57;UBERON:0005068!9.66e-17!57;UBERON:0006241!9.66e-17!57;UBERON:0007135!9.66e-17!57;UBERON:0001017!1.11e-15!82;UBERON:0005743!1.04e-14!86;UBERON:0000073!7.98e-13!94;UBERON:0001016!7.98e-13!94;UBERON:0000475!1.26e-12!365;UBERON:0001869!1.55e-12!32;UBERON:0001950!7.29e-12!20;UBERON:0001893!1.14e-11!34;UBERON:0000956!1.94e-11!25;UBERON:0000203!1.94e-11!25;UBERON:0003075!7.31e-11!86;UBERON:0007284!7.31e-11!86;UBERON:0000033!1.00e-10!123;UBERON:0002619!1.10e-10!22;UBERON:0003056!1.49e-10!61;UBERON:0002346!3.53e-10!90;UBERON:0002791!4.75e-10!33;UBERON:0007023!5.62e-10!115;UBERON:0000153!5.76e-10!129;UBERON:0007811!5.76e-10!129;UBERON:0002020!1.07e-09!34;UBERON:0003528!1.07e-09!34;UBERON:0000200!1.34e-09!6;UBERON:0001870!1.66e-08!2;UBERON:0001894!2.39e-08!7;UBERON:0006222!2.39e-08!7;UBERON:0001897!3.93e-08!2;UBERON:0002417!4.15e-07!61;UBERON:0000916!4.15e-07!61;UBERON:0004121!5.02e-07!169;UBERON:0004457!5.84e-07!12;UBERON:0000042!5.84e-07!12;UBERON:0000924!9.73e-07!173;UBERON:0006601!9.73e-07!173 | |ontology_enrichment_uberon=UBERON:0002616!6.57e-18!59;UBERON:0000955!9.75e-18!69;UBERON:0006238!9.75e-18!69;UBERON:0002780!2.15e-17!41;UBERON:0001890!2.15e-17!41;UBERON:0006240!2.15e-17!41;UBERON:0003080!6.72e-17!42;UBERON:0001049!9.66e-17!57;UBERON:0005068!9.66e-17!57;UBERON:0006241!9.66e-17!57;UBERON:0007135!9.66e-17!57;UBERON:0001017!1.11e-15!82;UBERON:0005743!1.04e-14!86;UBERON:0000073!7.98e-13!94;UBERON:0001016!7.98e-13!94;UBERON:0000475!1.26e-12!365;UBERON:0001869!1.55e-12!32;UBERON:0001950!7.29e-12!20;UBERON:0001893!1.14e-11!34;UBERON:0000956!1.94e-11!25;UBERON:0000203!1.94e-11!25;UBERON:0003075!7.31e-11!86;UBERON:0007284!7.31e-11!86;UBERON:0000033!1.00e-10!123;UBERON:0002619!1.10e-10!22;UBERON:0003056!1.49e-10!61;UBERON:0002346!3.53e-10!90;UBERON:0002791!4.75e-10!33;UBERON:0007023!5.62e-10!115;UBERON:0000153!5.76e-10!129;UBERON:0007811!5.76e-10!129;UBERON:0002020!1.07e-09!34;UBERON:0003528!1.07e-09!34;UBERON:0000200!1.34e-09!6;UBERON:0001870!1.66e-08!2;UBERON:0001894!2.39e-08!7;UBERON:0006222!2.39e-08!7;UBERON:0001897!3.93e-08!2;UBERON:0002417!4.15e-07!61;UBERON:0000916!4.15e-07!61;UBERON:0004121!5.02e-07!169;UBERON:0004457!5.84e-07!12;UBERON:0000042!5.84e-07!12;UBERON:0000924!9.73e-07!173;UBERON:0006601!9.73e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.17e-17;2!UBERON:0003497;1.17e-17;2!UBERON:0003909;1.17e-17;2!UBERON:0003835;1.17e-17;2!UBERON:0001280;3.06e-12;3!UBERON:0004647;3.06e-12;3!UBERON:0002107;6.82e-08;19!UBERON:0006925;6.82e-08;19!UBERON:0002417;8.79e-08;58!UBERON:0000916;8.79e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.07e-17,2;UBERON:0003497,1.07e-17,2;UBERON:0003909,1.07e-17,2;UBERON:0003835,1.07e-17,2;UBERON:0001280,2.89e-12,3;UBERON:0004647,2.89e-12,3;UBERON:0005171,2.89e-12,3;UBERON:0005172,2.46e-10,54;UBERON:0005173,2.46e-10,54;UBERON:0002417,2.35e-09,60;UBERON:0000916,2.35e-09,60;UBERON:0002107,6.82e-08,19;UBERON:0006925,6.82e-08,19;UBERON:0008836,6.82e-08,19;UBERON:0008835,6.09e-07,22;UBERON:0003894,6.09e-07,22;UBERON:0002394,8.97e-07,6;UBERON:0003928,8.97e-07,6 | |||
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| ||
|short_description=p5@ADRA1B | |short_description=p5@ADRA1B | ||
}} | }} |
Latest revision as of 15:48, 16 September 2015
Short description: | p5@ADRA1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ADRA1B_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | 82bp_to_L31773_5end |
EntrezGene: | ADRA1B |
HGNC: | 278 |
UniProt: | P35368 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 1.07e-17 | 2 |
endothelial cell of hepatic sinusoid | 1.07e-17 | 2 |
hepatic stem cell | 1.27e-17 | 2 |
hepatic mesenchymal stem cell | 1.27e-17 | 2 |
epithelial cell of uterus | 8.02e-07 | 6 |
stromal cell of endometrium | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 1.07e-17 | 2 |
abdomen blood vessel | 1.07e-17 | 2 |
sinusoid | 1.07e-17 | 2 |
abdominal segment blood vessel | 1.07e-17 | 2 |
liver parenchyma | 2.89e-12 | 3 |
liver lobule | 2.89e-12 | 3 |
hepatic duct | 2.89e-12 | 3 |
abdomen element | 2.46e-10 | 54 |
abdominal segment element | 2.46e-10 | 54 |
abdominal segment of trunk | 2.35e-09 | 60 |
abdomen | 2.35e-09 | 60 |
liver | 6.82e-08 | 19 |
digestive gland | 6.82e-08 | 19 |
liver bud | 6.82e-08 | 19 |
hepatic diverticulum | 6.09e-07 | 22 |
liver primordium | 6.09e-07 | 22 |
bile duct | 8.97e-07 | 6 |
digestive system duct | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.58e-34 | 1 |
mesenchymal cell neoplasm | 6.48e-18 | 2 |
female reproductive endometrioid cancer | 8.02e-07 | 6 |