FFCP PHASE1:Hg19::chr17:60705074..60705088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9902 | |EntrezGene=9902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16875 | |HGNC=16875 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBG0 | |UniProt=Q9UBG0 | ||
|association_with_transcript=312bp_to_ENST00000303375,NM_006039,uc002jac.2,uc002jad.2_5end | |association_with_transcript=312bp_to_ENST00000303375,NM_006039,uc002jac.2,uc002jad.2_5end | ||
|cluster_id=chr17:60705074..60705088,+ | |||
|coexpression_cluster_id=C589 | |coexpression_cluster_id=C589 | ||
|description=CAGE_peak_2_at_MRC2_5end | |description=CAGE_peak_2_at_MRC2_5end | ||
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|ontology_enrichment_celltype=CL:0000055!6.40e-39!180;CL:0000057!5.92e-19!75;CL:0000183!1.44e-16!59;CL:0000680!5.33e-16!57;CL:0000056!5.33e-16!57;CL:0000355!5.33e-16!57;CL:0000187!8.04e-15!54;CL:0000393!3.15e-14!60;CL:0000211!3.15e-14!60;CL:0000222!2.00e-12!119;CL:0000192!2.35e-12!42;CL:0000514!2.35e-12!42;CL:0000359!1.60e-10!32;CL:0000499!5.72e-07!27 | |ontology_enrichment_celltype=CL:0000055!6.40e-39!180;CL:0000057!5.92e-19!75;CL:0000183!1.44e-16!59;CL:0000680!5.33e-16!57;CL:0000056!5.33e-16!57;CL:0000355!5.33e-16!57;CL:0000187!8.04e-15!54;CL:0000393!3.15e-14!60;CL:0000211!3.15e-14!60;CL:0000222!2.00e-12!119;CL:0000192!2.35e-12!42;CL:0000514!2.35e-12!42;CL:0000359!1.60e-10!32;CL:0000499!5.72e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.02e-10;32!CL:0000192;6.53e-10;43!CL:0000187;5.27e-09;55!CL:0000057;2.51e-08;73!CL:0002320;4.72e-08;188!CL:0000393;8.39e-08;61!CL:0000211;8.39e-08;61!CL:0000134;1.29e-07;55!CL:0000499;1.29e-07;28!CL:0000327;1.44e-07;15!CL:0000048;1.74e-07;58!CL:0000723;3.41e-07;61 | |ontology_enrichment_celltype_v019=CL:0000359;2.02e-10;32!CL:0000192;6.53e-10;43!CL:0000187;5.27e-09;55!CL:0000057;2.51e-08;73!CL:0002320;4.72e-08;188!CL:0000393;8.39e-08;61!CL:0000211;8.39e-08;61!CL:0000134;1.29e-07;55!CL:0000499;1.29e-07;28!CL:0000327;1.44e-07;15!CL:0000048;1.74e-07;58!CL:0000723;3.41e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.26e-20,76;CL:0000680,2.69e-17,58;CL:0000056,2.69e-17,58;CL:0000355,2.69e-17,58;CL:0000187,4.78e-16,55;CL:0000393,3.96e-15,61;CL:0000211,3.96e-15,61;CL:0000192,1.92e-13,43;CL:0000514,1.92e-13,43;CL:0000222,1.57e-12,121;CL:0000359,5.14e-11,32;CL:0000048,2.50e-08,427;CL:0000723,8.88e-08,433;CL:0000499,1.04e-07,28;CL:0000327,1.22e-07,15;CL:0000034,4.18e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;6.53e-10;43!CL:0000355;3.60e-09;58 | |ontology_enrichment_development_v019=CL:0000514;6.53e-10;43!CL:0000355;3.60e-09;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.95e-18!83;UBERON:0002329!4.95e-18!83;UBERON:0003077!4.95e-18!83;UBERON:0003059!4.95e-18!83;UBERON:0007282!4.95e-18!83;UBERON:0009618!4.95e-18!83;UBERON:0007285!4.95e-18!83;UBERON:0004290!2.58e-16!70;UBERON:0001134!3.31e-16!61;UBERON:0002036!3.31e-16!61;UBERON:0003082!3.31e-16!61;UBERON:0002385!7.11e-16!63;UBERON:0001015!7.11e-16!63;UBERON:0000383!7.11e-16!63;UBERON:0000486!7.49e-16!82;UBERON:0005256!1.69e-13!143;UBERON:0000475!5.70e-12!365;UBERON:0004872!9.00e-12!84;UBERON:0002049!1.94e-11!79;UBERON:0007798!1.94e-11!79;UBERON:0000468!7.53e-11!659;UBERON:0001637!8.20e-11!42;UBERON:0003509!8.20e-11!42;UBERON:0004572!8.20e-11!42;UBERON:0000481!1.41e-10!347;UBERON:0002100!2.67e-10!216;UBERON:0004573!2.85e-10!33;UBERON:0004571!2.85e-10!33;UBERON:0001981!5.38e-10!60;UBERON:0007500!5.38e-10!60;UBERON:0004537!5.38e-10!60;UBERON:0006965!5.38e-10!60;UBERON:0003914!2.70e-09!118;UBERON:0003104!6.40e-09!238;UBERON:0009142!6.40e-09!238;UBERON:0004535!1.64e-08!110;UBERON:0000055!1.94e-08!69;UBERON:0001009!2.57e-08!113;UBERON:0000119!3.70e-08!312;UBERON:0000490!7.30e-08!138;UBERON:0000948!8.41e-08!24;UBERON:0005498!8.41e-08!24;UBERON:0004140!8.41e-08!24;UBERON:0009881!8.41e-08!24;UBERON:0004141!8.41e-08!24;UBERON:0003084!8.41e-08!24;UBERON:0007005!8.41e-08!24;UBERON:0004139!8.41e-08!24;UBERON:0004291!8.41e-08!24;UBERON:0000483!1.05e-07!309;UBERON:0000467!1.70e-07!625;UBERON:0000480!2.77e-07!626;UBERON:0007100!4.58e-07!27 | |ontology_enrichment_uberon=UBERON:0000914!4.95e-18!83;UBERON:0002329!4.95e-18!83;UBERON:0003077!4.95e-18!83;UBERON:0003059!4.95e-18!83;UBERON:0007282!4.95e-18!83;UBERON:0009618!4.95e-18!83;UBERON:0007285!4.95e-18!83;UBERON:0004290!2.58e-16!70;UBERON:0001134!3.31e-16!61;UBERON:0002036!3.31e-16!61;UBERON:0003082!3.31e-16!61;UBERON:0002385!7.11e-16!63;UBERON:0001015!7.11e-16!63;UBERON:0000383!7.11e-16!63;UBERON:0000486!7.49e-16!82;UBERON:0005256!1.69e-13!143;UBERON:0000475!5.70e-12!365;UBERON:0004872!9.00e-12!84;UBERON:0002049!1.94e-11!79;UBERON:0007798!1.94e-11!79;UBERON:0000468!7.53e-11!659;UBERON:0001637!8.20e-11!42;UBERON:0003509!8.20e-11!42;UBERON:0004572!8.20e-11!42;UBERON:0000481!1.41e-10!347;UBERON:0002100!2.67e-10!216;UBERON:0004573!2.85e-10!33;UBERON:0004571!2.85e-10!33;UBERON:0001981!5.38e-10!60;UBERON:0007500!5.38e-10!60;UBERON:0004537!5.38e-10!60;UBERON:0006965!5.38e-10!60;UBERON:0003914!2.70e-09!118;UBERON:0003104!6.40e-09!238;UBERON:0009142!6.40e-09!238;UBERON:0004535!1.64e-08!110;UBERON:0000055!1.94e-08!69;UBERON:0001009!2.57e-08!113;UBERON:0000119!3.70e-08!312;UBERON:0000490!7.30e-08!138;UBERON:0000948!8.41e-08!24;UBERON:0005498!8.41e-08!24;UBERON:0004140!8.41e-08!24;UBERON:0009881!8.41e-08!24;UBERON:0004141!8.41e-08!24;UBERON:0003084!8.41e-08!24;UBERON:0007005!8.41e-08!24;UBERON:0004139!8.41e-08!24;UBERON:0004291!8.41e-08!24;UBERON:0000483!1.05e-07!309;UBERON:0000467!1.70e-07!625;UBERON:0000480!2.77e-07!626;UBERON:0007100!4.58e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.18e-10;33!UBERON:0004571;6.18e-10;33!UBERON:0001637;2.11e-08;42!UBERON:0003509;2.11e-08;42!UBERON:0004572;2.11e-08;42!UBERON:0002384;9.75e-08;198!UBERON:0000948;1.31e-07;22!UBERON:0002385;1.83e-07;31!UBERON:0001015;1.83e-07;31!UBERON:0000383;1.83e-07;31!UBERON:0002204;2.15e-07;70!UBERON:0007100;9.00e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0004573;6.18e-10;33!UBERON:0004571;6.18e-10;33!UBERON:0001637;2.11e-08;42!UBERON:0003509;2.11e-08;42!UBERON:0004572;2.11e-08;42!UBERON:0002384;9.75e-08;198!UBERON:0000948;1.31e-07;22!UBERON:0002385;1.83e-07;31!UBERON:0001015;1.83e-07;31!UBERON:0000383;1.83e-07;31!UBERON:0002204;2.15e-07;70!UBERON:0007100;9.00e-07;25 | ||
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| ||
|short_description=p2@MRC2 | |short_description=p2@MRC2 | ||
}} | }} |
Latest revision as of 16:13, 16 September 2015
Short description: | p2@MRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MRC2_5end |
Coexpression cluster: | C589_Mesenchymal_Smooth_Fibroblast_Osteoblast_tenocyte_Preadipocyte_Synoviocyte |
Association with transcript: | 312bp_to_ENST00000303375, NM_006039, uc002jac.2, uc002jad.2_5end |
EntrezGene: | MRC2 |
HGNC: | 16875 |
UniProt: | Q9UBG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.26e-20 | 76 |
muscle precursor cell | 2.69e-17 | 58 |
myoblast | 2.69e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.69e-17 | 58 |
muscle cell | 4.78e-16 | 55 |
electrically responsive cell | 3.96e-15 | 61 |
electrically active cell | 3.96e-15 | 61 |
smooth muscle cell | 1.92e-13 | 43 |
smooth muscle myoblast | 1.92e-13 | 43 |
mesodermal cell | 1.57e-12 | 121 |
vascular associated smooth muscle cell | 5.14e-11 | 32 |
multi fate stem cell | 2.50e-08 | 427 |
somatic stem cell | 8.88e-08 | 433 |
stromal cell | 1.04e-07 | 28 |
extracellular matrix secreting cell | 1.22e-07 | 15 |
stem cell | 4.18e-07 | 441 |