FFCP PHASE1:Hg19::chr2:119699824..119699835,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8685 | |EntrezGene=8685 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6895 | |HGNC=6895 | ||
|TSSclassifier=strong | |||
|UniProt=B8ZZ64 | |UniProt=B8ZZ64 | ||
|association_with_transcript=5bp_to_ENST00000410021_5end | |association_with_transcript=5bp_to_ENST00000410021_5end | ||
|cluster_id=chr2:119699824..119699835,+ | |||
|coexpression_cluster_id=C433 | |||
|description=CAGE_peak_4_at_MARCO_5end | |description=CAGE_peak_4_at_MARCO_5end | ||
|id=chr2:119699824..119699835,+ | |id=chr2:119699824..119699835,+ | ||
|ontology_enrichment_celltype=CL:0002194!2.29e-41!63;CL:0000576!2.29e-41!63;CL:0000040!2.29e-41!63;CL:0000559!2.29e-41!63;CL:0002009!9.36e-40!65;CL:0000839!3.94e-36!70;CL:0000557!1.82e-35!71;CL:0000766!2.11e-34!76;CL:0002057!5.58e-34!42;CL:0000860!3.83e-31!45;CL:0000763!9.15e-20!112;CL:0000049!9.15e-20!112;CL:0002087!6.50e-18!119;CL:0002031!1.04e-15!124;CL:0000738!1.31e-14!140;CL:0002032!4.40e-10!165;CL:0000837!4.40e-10!165;CL:0000037!5.77e-10!172;CL:0000566!5.77e-10!172;CL:0000988!7.07e-09!182;CL:0000235!9.95e-09!10;CL:0002619!2.53e-08!3 | |ontology_enrichment_celltype=CL:0002194!2.29e-41!63;CL:0000576!2.29e-41!63;CL:0000040!2.29e-41!63;CL:0000559!2.29e-41!63;CL:0002009!9.36e-40!65;CL:0000839!3.94e-36!70;CL:0000557!1.82e-35!71;CL:0000766!2.11e-34!76;CL:0002057!5.58e-34!42;CL:0000860!3.83e-31!45;CL:0000763!9.15e-20!112;CL:0000049!9.15e-20!112;CL:0002087!6.50e-18!119;CL:0002031!1.04e-15!124;CL:0000738!1.31e-14!140;CL:0002032!4.40e-10!165;CL:0000837!4.40e-10!165;CL:0000037!5.77e-10!172;CL:0000566!5.77e-10!172;CL:0000988!7.07e-09!182;CL:0000235!9.95e-09!10;CL:0002619!2.53e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.63e-60;6!CL:0002619;1.74e-30;3!CL:0000473;1.91e-16;39!CL:0000234;1.91e-16;39!CL:0000766;4.30e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.00e-60,6;CL:0002619,1.50e-30,3;CL:0002194,3.99e-22,59;CL:0000576,3.99e-22,59;CL:0000040,3.99e-22,59;CL:0000559,3.99e-22,59;CL:0002009,2.35e-21,61;CL:0000839,1.25e-19,66;CL:0000557,2.58e-19,67;CL:0000766,7.21e-18,72;CL:0000473,1.14e-15,48;CL:0000234,1.14e-15,48;CL:0000763,2.30e-11,108;CL:0000049,2.30e-11,108;CL:0002087,1.44e-10,115;CL:0002031,4.71e-10,120;CL:0000738,1.16e-08,136;CL:0002032,4.91e-07,161;CL:0000837,4.91e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.06e-30!80;UBERON:0002390!1.81e-28!102;UBERON:0003061!1.81e-28!102;UBERON:0002193!8.93e-28!112;UBERON:0001474!2.29e-27!86;UBERON:0002405!4.36e-27!115;UBERON:0007023!7.69e-26!115;UBERON:0004765!4.94e-23!101;UBERON:0001434!4.94e-23!101;UBERON:0002204!7.57e-13!167;UBERON:0003081!3.04e-12!216;UBERON:0000062!1.39e-09!511;UBERON:0000467!1.34e-07!625;UBERON:0000480!1.49e-07!626;UBERON:0000468!3.29e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.18e-11;1!UBERON:0006518;1.18e-11;1!UBERON:0008949;1.18e-11;1!UBERON:0000101;1.18e-11;1!UBERON:0002167;1.18e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.57e-17,76;UBERON:0001474,1.69e-15,82;UBERON:0004765,5.63e-14,90;UBERON:0002405,1.80e-13,93;UBERON:0002390,1.07e-12,98;UBERON:0003061,1.07e-12,98;UBERON:0001434,2.07e-12,100;UBERON:0002171,1.18e-11,1;UBERON:0006518,1.18e-11,1;UBERON:0008949,1.18e-11,1;UBERON:0000101,1.18e-11,1;UBERON:0002167,1.18e-11,1;UBERON:0002193,2.30e-11,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,8.95661896959697,1.29557466407592,8.49999373192816,0.581592955118259,0.755751887377619,0.242584061187816,0.464858073811369,0,0,0.863077176966451,0.512321413058201,0.945928919554341,0.344745680736619,0,1.35426486594342,0.188242339542605,0.272906150057846,0,0,0.641858054152187,0,0.329851300186716,0.398927315243264,0.852449501065388,0.290209238628584,1.13477044938228,0,0.251248665256743,1.0429658368404,0.217188844705117,0,0,0.632924774881769,0.211255286311942,0,0.419317291016752,0.336985893439485,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5914366574389,13.806251643215,45.4811356603508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,5.02257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,3.81251743096572,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,0,0,0.13223260174269,0,0,8.22263076771249,0,12.4271716604159,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0.177404740325278,0,0,0.135939465953663,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0.852935927603924,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0.430333232356058,0,0,0,0,0,0,0,0,0.665756774185513,3.01910690386539,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,8.95661896959697,1.29557466407592,8.49999373192816,0.581592955118259,0.755751887377619,0.242584061187816,0.464858073811369,0,0,0.863077176966451,0.512321413058201,0.945928919554341,0.344745680736619,0,1.35426486594342,0.188242339542605,0.272906150057846,0,0,0.641858054152187,0,0.329851300186716,0.398927315243264,0.852449501065388,0.290209238628584,1.13477044938228,0,0.251248665256743,1.0429658368404,0.217188844705117,0,0,0.632924774881769,0.211255286311942,0,0.419317291016752,0.336985893439485,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5914366574389,13.806251643215,45.4811356603508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,5.02257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,3.81251743096572,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,0,0,0.13223260174269,0,0,8.22263076771249,0,12.4271716604159,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0.177404740325278,0,0,0.135939465953663,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0.852935927603924,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0.430333232356058,0,0,0,0,0,0,0,0,0.665756774185513,3.01910690386539,0 | ||
|short_description=p4@MARCO | |short_description=p4@MARCO | ||
}} | }} |
Latest revision as of 16:28, 16 September 2015
Short description: | p4@MARCO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MARCO_5end |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | 5bp_to_ENST00000410021_5end |
EntrezGene: | MARCO |
HGNC: | 6895 |
UniProt: | B8ZZ64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.00e-60 | 6 |
adult endothelial progenitor cell | 1.50e-30 | 3 |
monopoietic cell | 3.99e-22 | 59 |
monocyte | 3.99e-22 | 59 |
monoblast | 3.99e-22 | 59 |
promonocyte | 3.99e-22 | 59 |
macrophage dendritic cell progenitor | 2.35e-21 | 61 |
myeloid lineage restricted progenitor cell | 1.25e-19 | 66 |
granulocyte monocyte progenitor cell | 2.58e-19 | 67 |
myeloid leukocyte | 7.21e-18 | 72 |
defensive cell | 1.14e-15 | 48 |
phagocyte | 1.14e-15 | 48 |
myeloid cell | 2.30e-11 | 108 |
common myeloid progenitor | 2.30e-11 | 108 |
nongranular leukocyte | 1.44e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.71e-10 | 120 |
leukocyte | 1.16e-08 | 136 |
hematopoietic oligopotent progenitor cell | 4.91e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.91e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.57e-17 | 76 |
bone element | 1.69e-15 | 82 |
skeletal element | 5.63e-14 | 90 |
immune system | 1.80e-13 | 93 |
hematopoietic system | 1.07e-12 | 98 |
blood island | 1.07e-12 | 98 |
skeletal system | 2.07e-12 | 100 |
lower lobe of right lung | 1.18e-11 | 1 |
right lung lobe | 1.18e-11 | 1 |
lower lobe of lung | 1.18e-11 | 1 |
lobe of lung | 1.18e-11 | 1 |
right lung | 1.18e-11 | 1 |
hemolymphoid system | 2.30e-11 | 108 |