FFCP PHASE1:Hg19::chr1:239882842..239882850,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1131 | |EntrezGene=1131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1952 | |HGNC=1952 | ||
|TSSclassifier=strong | |||
|UniProt=B1AN12 | |UniProt=B1AN12 | ||
|association_with_transcript=0bp_to_ENST00000448020_5end | |association_with_transcript=0bp_to_ENST00000448020_5end | ||
|cluster_id=chr1:239882842..239882850,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_22_at_CHRM3_5end | |description=CAGE_peak_22_at_CHRM3_5end | ||
|id=chr1:239882842..239882850,+ | |id=chr1:239882842..239882850,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.66e-23;3 | |||
|ontology_enrichment_disease=DOID:1036!1.01e-08!8 | |ontology_enrichment_disease=DOID:1036!1.01e-08!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.41e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.47e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0003112!1.65e-16!1;UBERON:0000032!1.65e-16!1;UBERON:0005253!1.65e-16!1;UBERON:0003128!1.65e-16!1;UBERON:0002241!1.65e-16!1;UBERON:0001703!1.65e-16!1;UBERON:0004761!1.65e-16!1;UBERON:0009617!1.65e-16!1;UBERON:0001905!3.43e-09!2;UBERON:0002757!3.43e-09!2;UBERON:0010134!3.43e-09!2;UBERON:0002784!3.43e-09!2;UBERON:0005408!3.43e-09!2;UBERON:0001899!3.43e-09!2;UBERON:0000970!1.62e-07!20;UBERON:0002104!3.49e-07!21 | |ontology_enrichment_uberon=UBERON:0003112!1.65e-16!1;UBERON:0000032!1.65e-16!1;UBERON:0005253!1.65e-16!1;UBERON:0003128!1.65e-16!1;UBERON:0002241!1.65e-16!1;UBERON:0001703!1.65e-16!1;UBERON:0004761!1.65e-16!1;UBERON:0009617!1.65e-16!1;UBERON:0001905!3.43e-09!2;UBERON:0002757!3.43e-09!2;UBERON:0010134!3.43e-09!2;UBERON:0002784!3.43e-09!2;UBERON:0005408!3.43e-09!2;UBERON:0001899!3.43e-09!2;UBERON:0000970!1.62e-07!20;UBERON:0002104!3.49e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.61e-34;2!UBERON:0002757;3.61e-34;2!UBERON:0010134;3.61e-34;2!UBERON:0005408;3.61e-34;2!UBERON:0001899;3.61e-34;2!UBERON:0003296;7.35e-18;4!UBERON:0010133;7.35e-18;4!UBERON:0002784;7.35e-18;4!UBERON:0000966;1.71e-14;5!UBERON:0005388;1.71e-14;5!UBERON:0001802;1.71e-14;5!UBERON:0001894;8.16e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.61e-34,2;UBERON:0002757,3.61e-34,2;UBERON:0010134,3.61e-34,2;UBERON:0005408,3.61e-34,2;UBERON:0001899,3.61e-34,2;UBERON:0003296,7.35e-18,4;UBERON:0010133,7.35e-18,4;UBERON:0002784,7.35e-18,4;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0001894,8.16e-11,7;UBERON:0006222,8.16e-11,7 | |||
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|short_description=p22@CHRM3 | |short_description=p22@CHRM3 | ||
}} | }} |
Latest revision as of 16:29, 16 September 2015
Short description: | p22@CHRM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_CHRM3_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000448020_5end |
EntrezGene: | CHRM3 |
HGNC: | 1952 |
UniProt: | B1AN12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 3.61e-34 | 2 |
regional part of epithalamus | 3.61e-34 | 2 |
secretory circumventricular organ | 3.61e-34 | 2 |
circumventricular organ | 3.61e-34 | 2 |
epithalamus | 3.61e-34 | 2 |
gland of diencephalon | 7.35e-18 | 4 |
neuroendocrine gland | 7.35e-18 | 4 |
regional part of diencephalon | 7.35e-18 | 4 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
diencephalon | 8.16e-11 | 7 |
future diencephalon | 8.16e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.47e-09 | 8 |