FFCP PHASE1:Hg19::chr2:119699884..119699905,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8685 | |EntrezGene=8685 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6895 | |HGNC=6895 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKT8 | |UniProt=C9JKT8 | ||
|association_with_transcript=18bp_to_ENST00000412481_5end | |association_with_transcript=18bp_to_ENST00000412481_5end | ||
|cluster_id=chr2:119699884..119699905,+ | |||
|coexpression_cluster_id=C433 | |coexpression_cluster_id=C433 | ||
|description=CAGE_peak_1_at_MARCO_5end | |description=CAGE_peak_1_at_MARCO_5end | ||
|id=chr2:119699884..119699905,+ | |id=chr2:119699884..119699905,+ | ||
|ontology_enrichment_celltype=CL:0002194!1.28e-14!63;CL:0000576!1.28e-14!63;CL:0000040!1.28e-14!63;CL:0000559!1.28e-14!63;CL:0002009!7.47e-14!65;CL:0000839!8.38e-14!70;CL:0000557!1.86e-13!71;CL:0000766!1.05e-12!76;CL:0002057!1.00e-10!42;CL:0000860!1.49e-09!45 | |ontology_enrichment_celltype=CL:0002194!1.28e-14!63;CL:0000576!1.28e-14!63;CL:0000040!1.28e-14!63;CL:0000559!1.28e-14!63;CL:0002009!7.47e-14!65;CL:0000839!8.38e-14!70;CL:0000557!1.86e-13!71;CL:0000766!1.05e-12!76;CL:0002057!1.00e-10!42;CL:0000860!1.49e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000235;5.79e-14;6!CL:0002619;7.41e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.76e-14,6;CL:0002619,7.34e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.37e-10;7!UBERON:0006603;1.62e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007023;9.66e-15;114!UBERON:0004151;2.74e-07;3!UBERON:0003978;7.30e-07;3!UBERON:0000946;7.30e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.45e-55,114;UBERON:0001049,8.67e-11,56;UBERON:0005068,8.67e-11,56;UBERON:0006241,8.67e-11,56;UBERON:0007135,8.67e-11,56;UBERON:0000073,2.34e-09,53;UBERON:0002616,2.34e-09,53;UBERON:0003075,6.14e-09,82;UBERON:0007284,6.14e-09,82;UBERON:0002346,3.12e-08,86;UBERON:0001017,3.98e-08,81;UBERON:0011216,2.03e-07,223;UBERON:0004151,2.80e-07,3;UBERON:0010314,3.42e-07,132;UBERON:0003076,6.29e-07,15;UBERON:0003057,6.29e-07,15;UBERON:0000955,6.42e-07,68;UBERON:0006238,6.42e-07,68;UBERON:0003978,7.61e-07,3;UBERON:0009751,7.61e-07,3;UBERON:0000946,7.61e-07,3;UBERON:0002523,7.61e-07,3;UBERON:0005983,7.61e-07,3;UBERON:0002165,7.61e-07,3;UBERON:0002062,7.61e-07,3;UBERON:0007280,7.61e-07,3;UBERON:0001016,9.49e-07,89 | |||
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|short_description=p1@MARCO | |short_description=p1@MARCO | ||
}} | }} |
Latest revision as of 16:29, 16 September 2015
Short description: | p1@MARCO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MARCO_5end |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | 18bp_to_ENST00000412481_5end |
EntrezGene: | MARCO |
HGNC: | 6895 |
UniProt: | C9JKT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.76e-14 | 6 |
adult endothelial progenitor cell | 7.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.45e-55 | 114 |
neural tube | 8.67e-11 | 56 |
neural rod | 8.67e-11 | 56 |
future spinal cord | 8.67e-11 | 56 |
neural keel | 8.67e-11 | 56 |
regional part of nervous system | 2.34e-09 | 53 |
regional part of brain | 2.34e-09 | 53 |
neural plate | 6.14e-09 | 82 |
presumptive neural plate | 6.14e-09 | 82 |
neurectoderm | 3.12e-08 | 86 |
central nervous system | 3.98e-08 | 81 |
organ system subdivision | 2.03e-07 | 223 |
cardiac chamber | 2.80e-07 | 3 |
structure with developmental contribution from neural crest | 3.42e-07 | 132 |
posterior neural tube | 6.29e-07 | 15 |
chordal neural plate | 6.29e-07 | 15 |
brain | 6.42e-07 | 68 |
future brain | 6.42e-07 | 68 |
valve | 7.61e-07 | 3 |
cardiac mesenchyme | 7.61e-07 | 3 |
cardial valve | 7.61e-07 | 3 |
tunica intima | 7.61e-07 | 3 |
heart layer | 7.61e-07 | 3 |
endocardium | 7.61e-07 | 3 |
endocardial cushion | 7.61e-07 | 3 |
presumptive endocardium | 7.61e-07 | 3 |
nervous system | 9.49e-07 | 89 |