FFCP PHASE1:Hg19::chr16:447209..447225,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4833 | |EntrezGene=4833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7852 | |HGNC=7852 | ||
|TSSclassifier=strong | |||
|UniProt=O00746,Q4TT34 | |UniProt=O00746,Q4TT34 | ||
|association_with_transcript=0bp_to_ENST00000219479,ENST00000382940_5end | |association_with_transcript=0bp_to_ENST00000219479,ENST00000382940_5end | ||
|cluster_id=chr16:447209..447225,+ | |||
|coexpression_cluster_id=C2373 | |||
|description=CAGE_peak_2_at_NME4_5end | |description=CAGE_peak_2_at_NME4_5end | ||
|id=chr16:447209..447225,+ | |id=chr16:447209..447225,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.96e-29!180;CL:0002321!3.03e-28!248;CL:0000220!7.35e-28!246;CL:0000222!1.25e-22!119;CL:0000144!8.99e-21!625;CL:0000183!2.41e-20!59;CL:0002371!5.57e-18!591;CL:0000187!6.99e-18!54;CL:0000680!1.77e-17!57;CL:0000056!1.77e-17!57;CL:0000355!1.77e-17!57;CL:0000393!4.35e-17!60;CL:0000211!4.35e-17!60;CL:0000192!9.78e-17!42;CL:0000514!9.78e-17!42;CL:0000012!1.35e-16!682;CL:0000548!1.61e-16!679;CL:0000004!1.61e-16!679;CL:0000255!1.61e-16!679;CL:0000359!4.82e-13!32;CL:0000057!3.39e-08!75;CL:0000221!3.74e-08!71;CL:0000325!5.97e-08!39;CL:0000115!1.57e-07!35;CL:0002078!3.46e-07!44;CL:0000213!4.00e-07!57;CL:0000215!4.00e-07!57 | |ontology_enrichment_celltype=CL:0000055!8.96e-29!180;CL:0002321!3.03e-28!248;CL:0000220!7.35e-28!246;CL:0000222!1.25e-22!119;CL:0000144!8.99e-21!625;CL:0000183!2.41e-20!59;CL:0002371!5.57e-18!591;CL:0000187!6.99e-18!54;CL:0000680!1.77e-17!57;CL:0000056!1.77e-17!57;CL:0000355!1.77e-17!57;CL:0000393!4.35e-17!60;CL:0000211!4.35e-17!60;CL:0000192!9.78e-17!42;CL:0000514!9.78e-17!42;CL:0000012!1.35e-16!682;CL:0000548!1.61e-16!679;CL:0000004!1.61e-16!679;CL:0000255!1.61e-16!679;CL:0000359!4.82e-13!32;CL:0000057!3.39e-08!75;CL:0000221!3.74e-08!71;CL:0000325!5.97e-08!39;CL:0000115!1.57e-07!35;CL:0002078!3.46e-07!44;CL:0000213!4.00e-07!57;CL:0000215!4.00e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.38e-12;32!CL:0000192;4.33e-12;43!CL:0000187;2.07e-10;55!CL:0000393;6.19e-09;61!CL:0000211;6.19e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.45e-29,250;CL:0000222,5.69e-23,121;CL:0000187,7.80e-18,55;CL:0000680,1.92e-17,58;CL:0000056,1.92e-17,58;CL:0000355,1.92e-17,58;CL:0000393,4.58e-17,61;CL:0000211,4.58e-17,61;CL:0000192,1.20e-16,43;CL:0000514,1.20e-16,43;CL:0000359,4.76e-13,32;CL:0000057,2.09e-08,76;CL:0000221,2.11e-08,72;CL:0000115,8.48e-08,36;CL:0002078,1.93e-07,45;CL:0000213,2.30e-07,58;CL:0000215,2.30e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;4.33e-12;43!CL:0000355;1.45e-09;58!CL:0000222;7.13e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.47e-21!143;UBERON:0002100!4.27e-20!216;UBERON:0003914!1.16e-19!118;UBERON:0000490!1.19e-18!138;UBERON:0002049!2.44e-18!79;UBERON:0007798!2.44e-18!79;UBERON:0000486!9.97e-17!82;UBERON:0000914!1.43e-16!83;UBERON:0002329!1.43e-16!83;UBERON:0003077!1.43e-16!83;UBERON:0003059!1.43e-16!83;UBERON:0007282!1.43e-16!83;UBERON:0009618!1.43e-16!83;UBERON:0007285!1.43e-16!83;UBERON:0000055!8.58e-16!69;UBERON:0004290!9.27e-16!70;UBERON:0004872!9.39e-16!84;UBERON:0001134!5.50e-15!61;UBERON:0002036!5.50e-15!61;UBERON:0003082!5.50e-15!61;UBERON:0001981!6.52e-15!60;UBERON:0007500!6.52e-15!60;UBERON:0004537!6.52e-15!60;UBERON:0006965!6.52e-15!60;UBERON:0002385!7.06e-15!63;UBERON:0001015!7.06e-15!63;UBERON:0000383!7.06e-15!63;UBERON:0003104!1.17e-13!238;UBERON:0009142!1.17e-13!238;UBERON:0000119!9.41e-13!312;UBERON:0001637!1.19e-12!42;UBERON:0003509!1.19e-12!42;UBERON:0004572!1.19e-12!42;UBERON:0000483!1.93e-12!309;UBERON:0004535!9.12e-12!110;UBERON:0000475!1.79e-11!365;UBERON:0001009!2.58e-11!113;UBERON:0009569!3.12e-10!113;UBERON:0004573!2.57e-09!33;UBERON:0004571!2.57e-09!33;UBERON:0000481!2.17e-08!347;UBERON:0002417!2.15e-07!61;UBERON:0000916!2.15e-07!61;UBERON:0006554!4.66e-07!44;UBERON:0001008!9.80e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;2.37e-09;56!UBERON:0001981;2.37e-09;56!UBERON:0004537;2.37e-09;56!UBERON:0003914;4.47e-09;74!UBERON:0001637;1.04e-08;42!UBERON:0003509;1.04e-08;42!UBERON:0004572;1.04e-08;42!UBERON:0004573;2.64e-08;33!UBERON:0004571;2.64e-08;33!UBERON:0000055;5.01e-08;65!UBERON:0002049;8.26e-08;75!UBERON:0007798;8.26e-08;75!UBERON:0000490;3.50e-07;33 | |||
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| ||
|short_description=p2@NME4 | |short_description=p2@NME4 | ||
}} | }} |
Latest revision as of 16:31, 16 September 2015
Short description: | p2@NME4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NME4_5end |
Coexpression cluster: | C2373_Mesenchymal_Renal_leiomyoblastoma_Hepatic_Pericytes_Fibroblast_Smooth |
Association with transcript: | 0bp_to_ENST00000219479, ENST00000382940_5end |
EntrezGene: | NME4 |
HGNC: | 7852 |
UniProt: | O00746Q4TT34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.45e-29 | 250 |
mesodermal cell | 5.69e-23 | 121 |
muscle cell | 7.80e-18 | 55 |
muscle precursor cell | 1.92e-17 | 58 |
myoblast | 1.92e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.92e-17 | 58 |
electrically responsive cell | 4.58e-17 | 61 |
electrically active cell | 4.58e-17 | 61 |
smooth muscle cell | 1.20e-16 | 43 |
smooth muscle myoblast | 1.20e-16 | 43 |
vascular associated smooth muscle cell | 4.76e-13 | 32 |
fibroblast | 2.09e-08 | 76 |
ectodermal cell | 2.11e-08 | 72 |
endothelial cell | 8.48e-08 | 36 |
meso-epithelial cell | 1.93e-07 | 45 |
lining cell | 2.30e-07 | 58 |
barrier cell | 2.30e-07 | 58 |