FFCP PHASE1:Hg19::chr4:170190216..170190228,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57630 | |EntrezGene=57630 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17650 | |HGNC=17650 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000508685_5end | |association_with_transcript=15bp_to_ENST00000508685_5end | ||
|cluster_id=chr4:170190216..170190228,- | |||
|description=CAGE_peak_11_at_SH3RF1_5end | |description=CAGE_peak_11_at_SH3RF1_5end | ||
|id=chr4:170190216..170190228,- | |id=chr4:170190216..170190228,- | ||
|ontology_enrichment_celltype=CL:0000055!4.85e-15!180;CL:0000057!4.07e-13!75;CL:0002494!1.27e-09!16;CL:0000359!9.72e-09!32;CL:0000680!1.83e-08!57;CL:0000056!1.83e-08!57;CL:0000355!1.83e-08!57;CL:0000192!2.69e-08!42;CL:0000514!2.69e-08!42;CL:0000144!5.47e-08!625;CL:0000048!8.37e-08!430;CL:0000723!9.57e-08!436;CL:0002334!1.74e-07!12;CL:1000306!2.69e-07!4;CL:0002547!2.69e-07!4;CL:0000034!3.36e-07!444;CL:0000548!7.94e-07!679;CL:0000004!7.94e-07!679;CL:0000255!7.94e-07!679;CL:0000569!8.51e-07!4;CL:0000011!8.51e-07!4 | |ontology_enrichment_celltype=CL:0000055!4.85e-15!180;CL:0000057!4.07e-13!75;CL:0002494!1.27e-09!16;CL:0000359!9.72e-09!32;CL:0000680!1.83e-08!57;CL:0000056!1.83e-08!57;CL:0000355!1.83e-08!57;CL:0000192!2.69e-08!42;CL:0000514!2.69e-08!42;CL:0000144!5.47e-08!625;CL:0000048!8.37e-08!430;CL:0000723!9.57e-08!436;CL:0002334!1.74e-07!12;CL:1000306!2.69e-07!4;CL:0002547!2.69e-07!4;CL:0000034!3.36e-07!444;CL:0000548!7.94e-07!679;CL:0000004!7.94e-07!679;CL:0000255!7.94e-07!679;CL:0000569!8.51e-07!4;CL:0000011!8.51e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:1000306;3.09e-20;4!CL:0002547;3.09e-20;4!CL:0002615;1.02e-12;3!CL:0000136;6.30e-11;13!CL:0002568;2.16e-10;1!CL:0000511;6.05e-10;1!CL:0002625;6.05e-10;1!CL:0000216;6.05e-10;1!CL:0002616;6.05e-10;1!CL:0002539;2.69e-08;10!CL:0000359;7.28e-07;32 | |ontology_enrichment_celltype_v019=CL:1000306;3.09e-20;4!CL:0002547;3.09e-20;4!CL:0002615;1.02e-12;3!CL:0000136;6.30e-11;13!CL:0002568;2.16e-10;1!CL:0000511;6.05e-10;1!CL:0002625;6.05e-10;1!CL:0000216;6.05e-10;1!CL:0002616;6.05e-10;1!CL:0002539;2.69e-08;10!CL:0000359;7.28e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:1000306,4.91e-20,4;CL:0002547,4.91e-20,4;CL:0002615,1.33e-12,3;CL:0002568,2.37e-10,1;CL:0002616,3.40e-10,1;CL:0000511,4.06e-10,1;CL:0002625,4.06e-10,1;CL:0000216,4.06e-10,1;CL:0000136,1.73e-09,15;CL:0002539,2.40e-08,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!3.91e-09!14 | |ontology_enrichment_disease=DOID:2394!3.91e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:4235;6.05e-10;1 | |ontology_enrichment_disease_v019=DOID:4235;6.05e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4235,1.07e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004872!5.37e-11!84;UBERON:0003688!3.91e-10!6;UBERON:0002358!3.91e-10!6;UBERON:0003684!3.91e-10!6;UBERON:0001178!3.91e-10!6;UBERON:0001637!5.15e-09!42;UBERON:0003509!5.15e-09!42;UBERON:0004572!5.15e-09!42;UBERON:0004573!6.57e-09!33;UBERON:0004571!6.57e-09!33;UBERON:0004535!1.57e-08!110;UBERON:0001009!4.74e-08!113;UBERON:0003914!6.54e-08!118;UBERON:0002385!9.78e-08!63;UBERON:0001015!9.78e-08!63;UBERON:0000383!9.78e-08!63;UBERON:0001134!1.69e-07!61;UBERON:0002036!1.69e-07!61;UBERON:0003082!1.69e-07!61;UBERON:0000415!2.69e-07!4;UBERON:0007240!2.69e-07!4;UBERON:0005742!2.69e-07!4;UBERON:0005734!2.69e-07!4;UBERON:0004664!2.69e-07!4;UBERON:0004663!2.69e-07!4;UBERON:0002049!9.29e-07!79;UBERON:0007798!9.29e-07!79 | |ontology_enrichment_uberon=UBERON:0004872!5.37e-11!84;UBERON:0003688!3.91e-10!6;UBERON:0002358!3.91e-10!6;UBERON:0003684!3.91e-10!6;UBERON:0001178!3.91e-10!6;UBERON:0001637!5.15e-09!42;UBERON:0003509!5.15e-09!42;UBERON:0004572!5.15e-09!42;UBERON:0004573!6.57e-09!33;UBERON:0004571!6.57e-09!33;UBERON:0004535!1.57e-08!110;UBERON:0001009!4.74e-08!113;UBERON:0003914!6.54e-08!118;UBERON:0002385!9.78e-08!63;UBERON:0001015!9.78e-08!63;UBERON:0000383!9.78e-08!63;UBERON:0001134!1.69e-07!61;UBERON:0002036!1.69e-07!61;UBERON:0003082!1.69e-07!61;UBERON:0000415!2.69e-07!4;UBERON:0007240!2.69e-07!4;UBERON:0005742!2.69e-07!4;UBERON:0005734!2.69e-07!4;UBERON:0004664!2.69e-07!4;UBERON:0004663!2.69e-07!4;UBERON:0002049!9.29e-07!79;UBERON:0007798!9.29e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;3.09e-20;4!UBERON:0000415;3.09e-20;4!UBERON:0007240;3.09e-20;4!UBERON:0005742;3.09e-20;4!UBERON:0005734;3.09e-20;4!UBERON:0004664;3.09e-20;4!UBERON:0004663;3.09e-20;4!UBERON:0000947;2.10e-14;21!UBERON:0010191;2.10e-14;21!UBERON:0003688;1.08e-13;6!UBERON:0002358;1.08e-13;6!UBERON:0003684;1.08e-13;6!UBERON:0001178;1.08e-13;6!UBERON:0004573;1.79e-12;33!UBERON:0004571;1.79e-12;33!UBERON:0001136;6.05e-10;1!UBERON:0001343;6.05e-10;1!UBERON:0004910;6.05e-10;1!UBERON:0004813;6.05e-10;1!UBERON:0001637;1.04e-09;42!UBERON:0003509;1.04e-09;42!UBERON:0004572;1.04e-09;42!UBERON:0004457;2.63e-09;9!UBERON:0000042;2.63e-09;9!UBERON:0004237;2.69e-08;10!UBERON:0004695;2.69e-08;10!UBERON:0002111;2.69e-08;10!UBERON:0004178;2.69e-08;10!UBERON:0007500;9.21e-07;56!UBERON:0001981;9.21e-07;56!UBERON:0004537;9.21e-07;56 | |ontology_enrichment_uberon_v019=UBERON:0004797;3.09e-20;4!UBERON:0000415;3.09e-20;4!UBERON:0007240;3.09e-20;4!UBERON:0005742;3.09e-20;4!UBERON:0005734;3.09e-20;4!UBERON:0004664;3.09e-20;4!UBERON:0004663;3.09e-20;4!UBERON:0000947;2.10e-14;21!UBERON:0010191;2.10e-14;21!UBERON:0003688;1.08e-13;6!UBERON:0002358;1.08e-13;6!UBERON:0003684;1.08e-13;6!UBERON:0001178;1.08e-13;6!UBERON:0004573;1.79e-12;33!UBERON:0004571;1.79e-12;33!UBERON:0001136;6.05e-10;1!UBERON:0001343;6.05e-10;1!UBERON:0004910;6.05e-10;1!UBERON:0004813;6.05e-10;1!UBERON:0001637;1.04e-09;42!UBERON:0003509;1.04e-09;42!UBERON:0004572;1.04e-09;42!UBERON:0004457;2.63e-09;9!UBERON:0000042;2.63e-09;9!UBERON:0004237;2.69e-08;10!UBERON:0004695;2.69e-08;10!UBERON:0002111;2.69e-08;10!UBERON:0004178;2.69e-08;10!UBERON:0007500;9.21e-07;56!UBERON:0001981;9.21e-07;56!UBERON:0004537;9.21e-07;56 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,4.91e-20,4;UBERON:0007240,4.91e-20,4;UBERON:0005742,4.91e-20,4;UBERON:0005734,4.91e-20,4;UBERON:0004664,4.91e-20,4;UBERON:0004663,4.91e-20,4;UBERON:0004573,9.04e-16,33;UBERON:0004571,9.04e-16,33;UBERON:0000947,2.23e-14,21;UBERON:0010191,2.23e-14,21;UBERON:0003688,1.18e-13,6;UBERON:0002358,1.18e-13,6;UBERON:0003684,1.18e-13,6;UBERON:0001178,1.18e-13,6;UBERON:0001637,3.54e-12,42;UBERON:0003509,3.54e-12,42;UBERON:0004572,3.54e-12,42;UBERON:0004797,1.05e-11,7;UBERON:0004872,7.12e-11,83;UBERON:0001136,4.06e-10,1;UBERON:0001343,4.06e-10,1;UBERON:0004910,4.06e-10,1;UBERON:0005154,4.06e-10,1;UBERON:0005295,4.06e-10,1;UBERON:0004813,4.06e-10,1;UBERON:0005297,4.06e-10,1;UBERON:0005294,4.06e-10,1;UBERON:0010141,4.06e-10,1;UBERON:0005891,4.06e-10,1;UBERON:0007500,2.24e-08,59;UBERON:0001981,2.24e-08,59;UBERON:0004537,2.24e-08,59;UBERON:0006965,2.24e-08,59;UBERON:0004237,2.40e-08,10;UBERON:0004695,2.40e-08,10;UBERON:0002111,2.40e-08,10;UBERON:0004178,2.40e-08,10;UBERON:0000055,3.94e-07,68;UBERON:0004457,4.45e-07,12;UBERON:0000042,4.45e-07,12 | |||
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| ||
|short_description=p11@SH3RF1 | |short_description=p11@SH3RF1 | ||
}} | }} |
Latest revision as of 17:26, 16 September 2015
Short description: | p11@SH3RF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SH3RF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000508685_5end |
EntrezGene: | SH3RF1 |
HGNC: | 17650 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 4.91e-20 | 4 |
fibroblast of the aortic adventitia | 4.91e-20 | 4 |
adipocyte of omentum tissue | 1.33e-12 | 3 |
mesenchymal stem cell of Wharton's jelly | 2.37e-10 | 1 |
perirenal adipocyte cell | 3.40e-10 | 1 |
androgen binding protein secreting cell | 4.06e-10 | 1 |
seminiferous tubule epithelial cell | 4.06e-10 | 1 |
Sertoli cell | 4.06e-10 | 1 |
fat cell | 1.73e-09 | 15 |
aortic smooth muscle cell | 2.40e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 1.07e-09 | 1 |