FFCP PHASE1:Hg19::chr20:47273112..47273139,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:47273112..47273139,-
|short_description=p3@PREX1
|description=CAGE_peak_3_at_PREX1_5end
|association_with_transcript=0bp_to_uc002xtv.1_5end
|EntrezGene=5...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57580 | |EntrezGene=57580 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=32594 | |HGNC=32594 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TCU6 | |UniProt=Q8TCU6 | ||
|association_with_transcript=0bp_to_uc002xtv.1_5end | |||
|cluster_id=chr20:47273112..47273139,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_PREX1_5end | |||
|id=chr20:47273112..47273139,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.43e-22;82!UBERON:0006241;1.52e-13;3!UBERON:0003057;1.52e-13;3!UBERON:0010122;1.62e-09;2!UBERON:0002532;1.37e-07;206!UBERON:0010316;1.37e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.25e-109!57;UBERON:0005068!1.25e-109!57;UBERON:0006241!1.25e-109!57;UBERON:0007135!1.25e-109!57;UBERON:0002616!1.78e-90!59;UBERON:0001017!1.22e-88!82;UBERON:0005743!3.65e-84!86;UBERON:0000955!7.21e-84!69;UBERON:0006238!7.21e-84!69;UBERON:0002780!4.67e-82!41;UBERON:0001890!4.67e-82!41;UBERON:0006240!4.67e-82!41;UBERON:0003080!5.73e-80!42;UBERON:0000073!2.78e-79!94;UBERON:0001016!2.78e-79!94;UBERON:0003075!4.15e-77!86;UBERON:0007284!4.15e-77!86;UBERON:0001893!1.14e-74!34;UBERON:0002020!2.07e-74!34;UBERON:0003528!2.07e-74!34;UBERON:0002346!2.70e-73!90;UBERON:0002791!4.49e-71!33;UBERON:0001869!3.68e-67!32;UBERON:0007023!1.68e-62!115;UBERON:0003056!4.44e-53!61;UBERON:0002619!3.56e-50!22;UBERON:0000033!4.55e-46!123;UBERON:0000956!7.34e-44!25;UBERON:0000203!7.34e-44!25;UBERON:0001950!1.22e-43!20;UBERON:0000153!1.60e-43!129;UBERON:0007811!1.60e-43!129;UBERON:0004121!2.27e-40!169;UBERON:0000924!3.17e-39!173;UBERON:0006601!3.17e-39!173;UBERON:0002308!6.44e-34!9;UBERON:0000125!6.44e-34!9;UBERON:0003076!5.63e-29!15;UBERON:0003057!5.63e-29!15;UBERON:0000025!1.98e-27!194;UBERON:0009663!1.33e-26!7;UBERON:0002420!1.43e-26!9;UBERON:0007245!1.43e-26!9;UBERON:0010009!1.43e-26!9;UBERON:0010011!1.43e-26!9;UBERON:0000454!1.43e-26!9;UBERON:0002298!4.72e-24!8;UBERON:0004732!4.87e-23!13;UBERON:0004111!3.18e-20!241;UBERON:0004733!1.11e-19!12;UBERON:0002028!1.11e-19!12;UBERON:0007277!1.11e-19!12;UBERON:0002021!3.88e-19!5;UBERON:0000477!1.15e-17!286;UBERON:0000483!1.41e-16!309;UBERON:0000119!2.54e-16!312;UBERON:0000200!3.29e-16!6;UBERON:0000369!2.01e-15!4;UBERON:0002435!2.01e-15!4;UBERON:0000204!2.01e-15!4;UBERON:0010082!2.01e-15!4;UBERON:0000064!2.18e-13!219;UBERON:0006331!5.57e-13!3;UBERON:0000988!6.53e-13!3;UBERON:0001872!6.88e-13!5;UBERON:0001896!1.49e-12!3;UBERON:0005290!1.49e-12!3;UBERON:0010096!1.49e-12!3;UBERON:0000349!1.77e-12!5;UBERON:0002771!4.08e-12!3;UBERON:0001871!5.30e-12!7;UBERON:0002240!6.95e-12!3;UBERON:0000475!8.59e-12!365;UBERON:0005383!8.72e-12!3;UBERON:0005382!8.72e-12!3;UBERON:0002680!1.21e-10!9;UBERON:0001895!1.21e-10!9;UBERON:0010092!1.21e-10!9;UBERON:0005162!1.59e-09!2;UBERON:0000122!1.59e-09!2;UBERON:0001894!2.83e-09!7;UBERON:0006222!2.83e-09!7;UBERON:0001897!4.02e-09!2;UBERON:0002148!4.91e-09!2;UBERON:0009662!4.91e-09!2;UBERON:0001875!5.31e-09!2;UBERON:0006514!5.31e-09!2;UBERON:0001954!1.84e-08!2;UBERON:0003022!1.84e-08!2;UBERON:0002421!1.84e-08!2;UBERON:0002600!1.84e-08!2;UBERON:0001873!2.23e-08!2;UBERON:0010122!2.23e-08!2;UBERON:0002360!4.54e-08!2;UBERON:0000094!4.54e-08!2;UBERON:0007645!4.54e-08!2;UBERON:0000062!5.77e-08!511;UBERON:0005174!2.64e-07!5;UBERON:0001137!2.64e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.38e-64;34!UBERON:0003528;1.18e-60;34!UBERON:0002020;1.18e-60;34!UBERON:0002791;1.00e-58;32!UBERON:0001869;1.47e-58;32!UBERON:0000073;1.23e-55;53!UBERON:0002616;1.23e-55;53!UBERON:0002780;1.58e-55;41!UBERON:0001890;1.58e-55;41!UBERON:0002619;2.12e-46;22!UBERON:0001950;7.79e-45;20!UBERON:0000956;1.29e-40;25!UBERON:0000203;1.29e-40;25!UBERON:0000125;2.52e-39;9!UBERON:0002308;2.52e-39;9!UBERON:0001017;1.10e-38;75!UBERON:0000955;1.69e-35;68!UBERON:0009663;9.07e-31;7!UBERON:0002420;9.09e-31;9!UBERON:0007245;9.09e-31;9!UBERON:0010009;9.09e-31;9!UBERON:0010011;9.09e-31;9!UBERON:0000454;9.09e-31;9!UBERON:0001016;2.06e-29;83!UBERON:0002298;2.44e-27;6!UBERON:0004732;9.27e-27;13!UBERON:0004733;7.76e-23;12!UBERON:0002028;7.76e-23;12!UBERON:0007023;1.04e-19;114!UBERON:0000200;1.13e-18;6!UBERON:0000369;1.03e-17;4!UBERON:0002435;1.03e-17;4!UBERON:0000204;1.03e-17;4!UBERON:0000988;8.45e-15;3!UBERON:0001872;9.30e-15;5!UBERON:0002021;1.03e-14;5!UBERON:0001896;2.60e-14;3!UBERON:0005290;2.60e-14;3!UBERON:0002240;1.52e-13;3!UBERON:0005174;1.52e-13;3!UBERON:0001137;1.52e-13;3!UBERON:0005383;1.85e-13;3!UBERON:0005382;1.85e-13;3!UBERON:0011216;2.91e-13;132!UBERON:0002680;2.65e-12;9!UBERON:0001895;2.65e-12;9!UBERON:0005162;7.90e-11;2!UBERON:0000122;7.90e-11;2!UBERON:0001871;1.64e-10;6!UBERON:0001897;2.38e-10;2!UBERON:0010225;2.38e-10;2!UBERON:0002148;2.73e-10;2!UBERON:0006331;2.73e-10;2!UBERON:0009662;2.73e-10;2!UBERON:0001875;3.00e-10;2!UBERON:0006514;3.00e-10;2!UBERON:0002771;7.12e-10;2!UBERON:0001873;1.62e-09;2!UBERON:0010314;2.12e-09;132!UBERON:0000349;1.16e-08;5!UBERON:0001870;6.96e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.75e-113,56;UBERON:0005068,7.75e-113,56;UBERON:0006241,7.75e-113,56;UBERON:0007135,7.75e-113,56;UBERON:0000073,2.11e-101,53;UBERON:0002616,2.11e-101,53;UBERON:0001017,4.14e-88,81;UBERON:0000955,4.25e-86,68;UBERON:0006238,4.25e-86,68;UBERON:0001016,5.27e-83,89;UBERON:0003075,2.00e-79,82;UBERON:0007284,2.00e-79,82;UBERON:0002780,1.82e-78,41;UBERON:0001890,1.82e-78,41;UBERON:0003080,1.82e-78,41;UBERON:0006240,1.82e-78,41;UBERON:0002346,2.08e-75,86;UBERON:0001893,6.05e-75,34;UBERON:0003528,1.16e-74,34;UBERON:0002020,1.16e-74,34;UBERON:0002791,1.05e-66,32;UBERON:0001869,1.58e-66,32;UBERON:0007023,2.84e-62,114;UBERON:0010371,4.14e-61,104;UBERON:0003056,3.42e-55,61;UBERON:0010314,3.11e-49,132;UBERON:0002619,1.87e-46,22;UBERON:0001950,7.08e-45,20;UBERON:0000956,1.16e-40,25;UBERON:0000203,1.16e-40,25;UBERON:0004121,4.94e-40,171;UBERON:0000924,4.94e-40,171;UBERON:0006601,4.94e-40,171;UBERON:0000125,3.02e-39,9;UBERON:0002308,3.02e-39,9;UBERON:0003076,1.04e-33,15;UBERON:0003057,1.04e-33,15;UBERON:0002420,9.46e-31,9;UBERON:0007245,9.46e-31,9;UBERON:0010009,9.46e-31,9;UBERON:0010011,9.46e-31,9;UBERON:0000454,9.46e-31,9;UBERON:0009663,1.02e-30,7;UBERON:0011216,1.88e-30,223;UBERON:0000025,1.08e-27,192;UBERON:0002298,2.39e-27,6;UBERON:0004732,8.85e-27,13;UBERON:0004733,7.43e-23,12;UBERON:0002028,7.43e-23,12;UBERON:0007277,7.43e-23,12;UBERON:0004111,1.48e-20,240;UBERON:0000200,1.13e-18,6;UBERON:0000369,1.08e-17,4;UBERON:0002435,1.08e-17,4;UBERON:0000204,1.08e-17,4;UBERON:0010082,1.08e-17,4;UBERON:0000483,1.64e-15,306;UBERON:0000119,2.79e-15,309;UBERON:0001872,8.35e-15,5;UBERON:0000988,9.06e-15,3;UBERON:0002021,1.04e-14,5;UBERON:0001896,2.37e-14,3;UBERON:0005290,2.37e-14,3;UBERON:0010096,2.37e-14,3;UBERON:0002240,1.42e-13,3;UBERON:0005174,1.42e-13,3;UBERON:0001137,1.42e-13,3;UBERON:0005383,1.85e-13,3;UBERON:0005382,1.85e-13,3;UBERON:0002680,2.69e-12,9;UBERON:0001895,2.69e-12,9;UBERON:0010092,2.69e-12,9;UBERON:0005162,7.90e-11,2;UBERON:0000122,7.90e-11,2;UBERON:0001871,1.62e-10,6;UBERON:0001897,2.32e-10,2;UBERON:0010225,2.32e-10,2;UBERON:0002148,2.93e-10,2;UBERON:0006331,2.93e-10,2;UBERON:0009662,2.93e-10,2;UBERON:0001875,3.21e-10,2;UBERON:0006514,3.21e-10,2;UBERON:0002771,7.62e-10,2;UBERON:0001873,1.70e-09,2;UBERON:0010122,1.70e-09,2;UBERON:0000349,1.11e-08,5;UBERON:0000923,4.70e-07,560;UBERON:0010316,4.70e-07,560;UBERON:0005291,4.70e-07,560;UBERON:0006598,4.70e-07,560;UBERON:0010317,4.70e-07,560;UBERON:0002532,4.70e-07,560;UBERON:0002050,6.09e-07,564;UBERON:0001870,6.96e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.75213198770461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5093239375235,15.3995042948673,0,0,0,0,0,0,0,0,0,0,5.31444831488303,3.49729672013683,0,1.76926815889959,2.65992857058193,2.4132393686937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.5605675654982,0,26.237617921238,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,9.18006541360241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00420288709789,23.5477251694228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,8.85322139725241,0,0,0,0,0,9.1124334987037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66195807622389,16.1323774126082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14889300666675,6.00916467391199,4.0138643698305,12.6459118752012,16.9523180029977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0284839452006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2677819934238,2.8339315265117,16.2826536238294,8.61488729811171,0.252071696221718,12.5174626960234,8.39673357285626,19.9877188362816,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3049041698237,7.02970288752463,6.20060389503552,15.6002893077011,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,21.1385869557947,12.8256908447556,0,0,0,5.81327682689207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49663707921847,8.91139200981258,1.2679671827502,0,0,0,0,0,0,0,0,0,46.0120061916159,0,16.725906586965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46252495512901,32.4779607006351,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.75213198770461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5093239375235,15.3995042948673,0,0,0,0,0,0,0,0,0,0,5.31444831488303,3.49729672013683,0,1.76926815889959,2.65992857058193,2.4132393686937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.5605675654982,0,26.237617921238,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,9.18006541360241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00420288709789,23.5477251694228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,8.85322139725241,0,0,0,0,0,9.1124334987037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66195807622389,16.1323774126082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14889300666675,6.00916467391199,4.0138643698305,12.6459118752012,16.9523180029977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0284839452006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2677819934238,2.8339315265117,16.2826536238294,8.61488729811171,0.252071696221718,12.5174626960234,8.39673357285626,19.9877188362816,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3049041698237,7.02970288752463,6.20060389503552,15.6002893077011,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,21.1385869557947,12.8256908447556,0,0,0,5.81327682689207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49663707921847,8.91139200981258,1.2679671827502,0,0,0,0,0,0,0,0,0,46.0120061916159,0,16.725906586965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46252495512901,32.4779607006351,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@PREX1 | |||
}} | }} |
Latest revision as of 17:35, 16 September 2015
Short description: | p3@PREX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PREX1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_uc002xtv.1_5end |
EntrezGene: | PREX1 |
HGNC: | 32594 |
UniProt: | Q8TCU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data