FFCP PHASE1:Hg19::chr9:140506865..140506902,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:140506865..140506902,+
|short_description=p5@ARRDC1
|description=CAGE_peak_5_at_ARRDC1_5end
|association_with_transcript=-1bp_to_ENST00000497877_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92714 | |EntrezGene=92714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28633 | |HGNC=28633 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000497877_5end | |||
|cluster_id=chr9:140506865..140506902,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_5_at_ARRDC1_5end | |||
|id=chr9:140506865..140506902,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.69e-40!254;CL:0002076!1.09e-22!43;CL:0000223!6.49e-17!59;CL:0002368!9.07e-12!13;CL:0002251!6.95e-10!21;CL:0002202!2.30e-08!9;CL:0002632!2.30e-08!9;CL:0000082!3.65e-08!19;CL:0000063!2.10e-07!578;CL:0002159!9.79e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.87e-21;42!CL:0002368;5.82e-15;13!CL:0002251;5.47e-13;20!CL:0000349;6.82e-13;19!CL:0002327;1.08e-10;4!CL:0002202;1.81e-08;9!CL:0002632;1.81e-08;9!CL:0002577;5.79e-08;3!CL:0002328;6.27e-08;3!CL:0002623;3.14e-07;3!CL:0002159;6.94e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.13e-27,42;CL:0000066,4.15e-24,253;CL:0000223,2.78e-21,58;CL:0002368,5.70e-15,13;CL:0000349,5.31e-13,19;CL:0002251,7.04e-13,20;CL:0002327,1.11e-10,4;CL:0002202,2.16e-08,9;CL:0002632,2.16e-08,9;CL:0002328,6.24e-08,3;CL:0002577,6.24e-08,3;CL:0002623,4.09e-07,3;CL:0002159,6.30e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;2.63e-11;58 | |||
|ontology_enrichment_disease=DOID:305!9.93e-22!106;DOID:0050687!7.78e-18!143;DOID:299!4.81e-10!25;DOID:14566!2.81e-08!239;DOID:162!3.12e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.04e-10;4!DOID:1612;1.04e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.01e-10,4;DOID:1612,1.01e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.17e-21!169;UBERON:0000925!2.17e-21!169;UBERON:0006595!2.17e-21!169;UBERON:0001004!2.86e-18!72;UBERON:0000077!3.49e-15!130;UBERON:0008947!8.49e-15!38;UBERON:0003258!8.49e-15!38;UBERON:0000464!2.43e-14!104;UBERON:0000065!4.06e-14!53;UBERON:0001007!4.49e-14!155;UBERON:0001555!4.49e-14!155;UBERON:0007026!4.49e-14!155;UBERON:0005153!1.10e-12!37;UBERON:0001041!9.19e-12!98;UBERON:0004921!1.31e-11!129;UBERON:0004185!1.31e-11!129;UBERON:0000466!1.53e-11!126;UBERON:0000072!7.09e-11!46;UBERON:0005157!8.63e-11!51;UBERON:0009569!1.46e-10!113;UBERON:0000915!1.73e-10!52;UBERON:0005178!1.76e-10!34;UBERON:0002224!1.76e-10!34;UBERON:0005181!5.90e-10!35;UBERON:0005177!6.49e-10!107;UBERON:0005631!7.22e-09!14;UBERON:0000158!7.22e-09!14;UBERON:0003104!8.29e-09!238;UBERON:0009142!8.29e-09!238;UBERON:0002048!1.21e-08!22;UBERON:0000117!1.21e-08!22;UBERON:0000171!1.21e-08!22;UBERON:0000170!1.21e-08!22;UBERON:0005597!1.21e-08!22;UBERON:0000118!1.21e-08!22;UBERON:0004802!3.65e-08!19;UBERON:0000115!3.65e-08!19;UBERON:0005911!3.92e-08!82;UBERON:0006554!8.28e-08!44;UBERON:0002100!9.05e-08!216;UBERON:0007196!1.54e-07!14;UBERON:0001558!1.54e-07!14;UBERON:0001008!1.82e-07!45;UBERON:0000058!8.24e-07!26;UBERON:0004807!8.30e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.93e-13;24!UBERON:0005631;3.86e-11;10!UBERON:0000158;3.86e-11;10!UBERON:0001911;1.08e-10;4!UBERON:0001987;1.50e-09;4!UBERON:0000305;1.57e-08;7!UBERON:0005911;6.20e-08;36!UBERON:0004815;6.27e-08;3!UBERON:0002031;6.27e-08;3!UBERON:0004807;7.44e-08;22!UBERON:0006947;2.88e-07;3!UBERON:0004054;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.60e-18,14;UBERON:0000158,1.60e-18,14;UBERON:0000478,1.79e-13,24;UBERON:0003124,1.12e-11,7;UBERON:0004119,3.47e-11,160;UBERON:0000925,3.47e-11,160;UBERON:0006595,3.47e-11,160;UBERON:0001911,1.11e-10,4;UBERON:0005333,1.11e-10,4;UBERON:0008425,1.11e-10,4;UBERON:0005311,1.11e-10,4;UBERON:0005153,5.74e-10,37;UBERON:0005157,1.83e-09,47;UBERON:0001987,1.99e-09,4;UBERON:0004340,1.99e-09,4;UBERON:0001004,4.39e-09,74;UBERON:0000305,1.28e-08,7;UBERON:0004815,6.24e-08,3;UBERON:0002031,6.24e-08,3;UBERON:0006947,1.60e-07,3;UBERON:0004054,1.60e-07,3;UBERON:0004871,1.79e-07,8;UBERON:0000915,4.34e-07,52;UBERON:0004175,9.08e-07,25 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,3.9319446983431,3.9565046734268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,7.35536979583142,6.6265302131215,2.58827807116751,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,3.27865759463288,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10531672999548,0.496971951695318,0.25326102332916,0,0.286836620748814,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.61246251376468,0,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0.538168907066586,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0.506328996723799,0.194874010322397,0.252433774244115,0,0,0,0,0,2.12586938479627,0.545492241181669,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,0.168584690078102,0.482022059766964,0.55146986366197,0.653638332277218,0.949082476444386,0.539325232640658,0.588664395376038,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,1.96781501668982,0,2.96325770603289,3.37205259772859,2.31216636546751,2.40729957412177,0,0,0,0,0,0,0,0,14.223679163267,11.1603201072333,0,0,0,0.93733833986777,3.35964256397719,1.70130116690864,8.86629374758198,11.0440896635306,7.66765358330422,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,1.64648067356154,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.630809660135739,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,3.33440328590885,6.65741758041988,4.23346410661552,0.248107807818777,0.306923946576125,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0.725156697549733,1.60405176242628,2.94659164594868,0,0,0,0.451199612907412,0.15403067420883,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0.812839312631559,1.00337954770971,0.509752546090077,0,0.447749509444357,0,0,0.256450125116389,0,0,0.412164046590889,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,1.81813406897076,1.53752053892085,11.7403695495017,1.31505115112215,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,3.36777394539292,0.670302275535787,1.08890984861323,0.659006605437454,4.3050537267123,1.68471475667626,4.87773168890343,0.689170200620878,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0.568272293612826,5.96861211844225,3.8605408508243,15.0508744028624,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,1.07412704805365,0,0.0986434056369336,0,0,0,0,0,6.77112178821606,70.6676799969261,0.724999575434793,1.365521379426,1.5255219017566,2.36387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,2.23077990845765,0.230850775511391,0,0.46112780877612,0.269272933229316,2.28159481036217,7.97502899329799,0,5.86338253620498,0,0,0,0,0,0,0,0,0.843992258112108,0.816164040795739,0.141353071433941,0,0,1.23840590304675,0,0,0,0,0,0,0,0,5.47860933009851,0.242780379534093,5.52418163989147,0,0,0.063186579628488,0.150323419414493,0,0,0,1.56966459203613,0,0.284609546029793,0.554698692052555,1.21491816834592,0.195984794828755,0.522355239482415,1.92199335066233,1.37588825977293,0.19351266257817,0.146178634172371,0.246346371159628,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0,3.51992488922645,0.320635281006135,2.98834192635094,0.19980960958213,1.00863292007874,0,0,0.14405479798815,0.248505071130865,3.77110455386873,1.35904206073614,1.77824838730966,0,0,0,0,0,0,0,0,0,0,2.79550600698588,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.315222829196793,0.0524545881349981,0.105600336519406,0.717149357331379,2.87872795979168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,1.40963004463334,1.28144895081234,0,0.414239055347196,0,0,0,0,0,0,0,0,1.88464915500281,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.214821114084977,0,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0.770479321629213,0.214441591374926,0,0,0.926089897295336,0,0.71635536432595,2.47041157728778,0.657852148736121,0.883445729729405,1.3503982678964,1.01365464391844,0,3.10887307558079,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0,0.861074898304078,1.13503190713367,0,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.52032869459948,0,1.10057159113007,0.115525666150338,0,0,0,0,0,1.56302802246618,1.83334686136996,0.49131575253029,0.295712172434091,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,1.24183318227694,0,0,0,0,0.709163045303809,0.778619813244484,0.549451649953598,0,0,0,0.215927591218621,0,0,0,0,0,0,1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| ||
|short_description=p5@ARRDC1 | |||
}} | }} |
Latest revision as of 17:37, 16 September 2015
Short description: | p5@ARRDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARRDC1_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -1bp_to_ENST00000497877_5end |
EntrezGene: | ARRDC1 |
HGNC: | 28633 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.13e-27 | 42 |
epithelial cell | 4.15e-24 | 253 |
endodermal cell | 2.78e-21 | 58 |
respiratory epithelial cell | 5.70e-15 | 13 |
extraembryonic cell | 5.31e-13 | 19 |
epithelial cell of alimentary canal | 7.04e-13 | 20 |
mammary gland epithelial cell | 1.11e-10 | 4 |
epithelial cell of tracheobronchial tree | 2.16e-08 | 9 |
epithelial cell of lower respiratory tract | 2.16e-08 | 9 |
bronchial epithelial cell | 6.24e-08 | 3 |
placental epithelial cell | 6.24e-08 | 3 |
acinar cell of salivary gland | 4.09e-07 | 3 |
general ecto-epithelial cell | 6.30e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.60e-18 | 14 |
membranous layer | 1.60e-18 | 14 |
extraembryonic structure | 1.79e-13 | 24 |
chorion | 1.12e-11 | 7 |
endoderm-derived structure | 3.47e-11 | 160 |
endoderm | 3.47e-11 | 160 |
presumptive endoderm | 3.47e-11 | 160 |
mammary gland | 1.11e-10 | 4 |
mammary bud | 1.11e-10 | 4 |
mammary ridge | 1.11e-10 | 4 |
mammary placode | 1.11e-10 | 4 |
epithelial bud | 5.74e-10 | 37 |
epithelial fold | 1.83e-09 | 47 |
placenta | 1.99e-09 | 4 |
allantois | 1.99e-09 | 4 |
respiratory system | 4.39e-09 | 74 |
amnion | 1.28e-08 | 7 |
lower respiratory tract epithelium | 6.24e-08 | 3 |
epithelium of bronchus | 6.24e-08 | 3 |
male genital duct | 1.60e-07 | 3 |
internal male genitalia | 1.60e-07 | 3 |
somatic layer of lateral plate mesoderm | 1.79e-07 | 8 |
thoracic segment of trunk | 4.34e-07 | 52 |
internal genitalia | 9.08e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.01e-10 | 4 |
breast cancer | 1.01e-10 | 4 |