FFCP PHASE1:Hg19::chr14:94845860..94845906,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:94845860..94845906,-
|short_description=p16@SERPINA1
|description=CAGE_peak_16_at_SERPINA1_5end
|association_with_transcript=41bp_to_,-41bp_to_FJ830375,V0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5265 | |EntrezGene=5265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8941 | |HGNC=8941 | ||
|TSSclassifier=strong | |||
|UniProt=C1KH65,P01009 | |UniProt=C1KH65,P01009 | ||
|association_with_transcript=41bp_to_,-41bp_to_FJ830375,V00496_5end | |||
|cluster_id=chr14:94845860..94845906,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_16_at_SERPINA1_5end | |||
|id=chr14:94845860..94845906,- | |||
|ontology_enrichment_celltype=CL:0002057!5.15e-59!42;CL:0000860!3.66e-54!45;CL:0000766!3.14e-46!76;CL:0002194!4.06e-46!63;CL:0000576!4.06e-46!63;CL:0000040!4.06e-46!63;CL:0000559!4.06e-46!63;CL:0002009!2.92e-44!65;CL:0000839!4.99e-42!70;CL:0000557!2.54e-39!71;CL:0000763!1.23e-27!112;CL:0000049!1.23e-27!112;CL:0002087!1.30e-23!119;CL:0000738!1.88e-23!140;CL:0002031!8.85e-21!124;CL:0000037!5.88e-17!172;CL:0000566!5.88e-17!172;CL:0002032!1.79e-16!165;CL:0000837!1.79e-16!165;CL:0000988!3.62e-15!182;CL:0002393!1.27e-14!9;CL:0002397!1.27e-14!9;CL:0000181!1.84e-09!12;CL:0000417!1.84e-09!12;CL:0000668!1.84e-09!12;CL:0000414!1.84e-09!12;CL:0000412!1.84e-09!12;CL:0000182!1.84e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.66e-42;33!CL:0002057;5.66e-42;33!CL:0000576;8.47e-29;48!CL:0000473;9.04e-29;39!CL:0000234;9.04e-29;39!CL:0000766;6.29e-19;69!CL:0000182;9.25e-17;12!CL:0000763;1.95e-10;100!CL:0002087;4.06e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.53e-51,42;CL:0002057,3.53e-51,42;CL:0000473,5.22e-44,48;CL:0000234,5.22e-44,48;CL:0000766,8.02e-35,72;CL:0002194,5.64e-34,59;CL:0000576,5.64e-34,59;CL:0000040,5.64e-34,59;CL:0000559,5.64e-34,59;CL:0002009,1.11e-32,61;CL:0000839,8.73e-30,66;CL:0000557,2.94e-29,67;CL:0000763,4.39e-21,108;CL:0000049,4.39e-21,108;CL:0000738,2.35e-18,136;CL:0002087,9.48e-18,115;CL:0000182,9.88e-17,12;CL:0002031,2.82e-15,120;CL:0000037,1.49e-13,168;CL:0002032,3.14e-13,161;CL:0000837,3.14e-13,161;CL:0000988,1.62e-12,177;CL:0000134,6.29e-07,354;CL:0002393,8.83e-07,9;CL:0002397,8.83e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.39e-39;42!UBERON:0004161;6.15e-18;11!UBERON:0009497;5.12e-15;13!UBERON:0003104;2.78e-09;31!UBERON:0001041;1.08e-07;30!CL:0000049;5.86e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.82e-40!115;UBERON:0002390!1.18e-35!102;UBERON:0003061!1.18e-35!102;UBERON:0002371!6.05e-35!80;UBERON:0001474!1.66e-31!86;UBERON:0002193!5.30e-31!112;UBERON:0004765!1.00e-24!101;UBERON:0001434!1.00e-24!101;UBERON:0003081!1.28e-12!216;UBERON:0009497!2.39e-11!25;UBERON:0000015!2.39e-11!25;UBERON:0002423!2.39e-11!25;UBERON:0006235!2.39e-11!25;UBERON:0004161!2.39e-11!25;UBERON:0002204!1.67e-10!167;UBERON:0005057!1.80e-10!26;UBERON:0008835!6.92e-10!22;UBERON:0003894!6.92e-10!22;UBERON:0009854!2.56e-09!23;UBERON:0002107!1.33e-08!19;UBERON:0006925!1.33e-08!19;UBERON:0008836!1.33e-08!19;UBERON:0007499!2.54e-08!25;UBERON:0000062!6.17e-08!511;UBERON:0009856!6.98e-08!26;UBERON:0000926!1.09e-07!448;UBERON:0004120!1.09e-07!448;UBERON:0006603!1.09e-07!448;UBERON:0003929!1.35e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.49e-17;19!UBERON:0006925;7.49e-17;19!UBERON:0002423;3.83e-15;25!UBERON:0002365;2.16e-09;31!UBERON:0002330;2.16e-09;31!UBERON:0002368;3.04e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.99e-25,76;UBERON:0001474,7.17e-23,82;UBERON:0004765,2.49e-20,90;UBERON:0002390,5.66e-20,98;UBERON:0003061,5.66e-20,98;UBERON:0002405,1.72e-19,93;UBERON:0001434,1.00e-17,100;UBERON:0002193,1.43e-17,108;UBERON:0002107,7.91e-17,19;UBERON:0006925,7.91e-17,19;UBERON:0008836,7.91e-17,19;UBERON:0009497,3.89e-15,25;UBERON:0000015,3.89e-15,25;UBERON:0002423,3.89e-15,25;UBERON:0006235,3.89e-15,25;UBERON:0004161,3.89e-15,25;UBERON:0008835,2.72e-14,22;UBERON:0003894,2.72e-14,22;UBERON:0009854,1.36e-13,23;UBERON:0007499,2.30e-12,25;UBERON:0009856,8.03e-12,26;UBERON:0002365,1.24e-09,31;UBERON:0002330,1.24e-09,31;UBERON:0005172,1.07e-08,54;UBERON:0005173,1.07e-08,54;UBERON:0002204,2.24e-08,167;UBERON:0002368,2.44e-08,35;UBERON:0002417,1.41e-07,60;UBERON:0000916,1.41e-07,60;UBERON:0003081,1.94e-07,203;UBERON:0003929,3.71e-07,54 | |||
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| ||
|short_description=p16@SERPINA1 | |||
}} | }} |
Latest revision as of 17:49, 16 September 2015
Short description: | p16@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SERPINA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 41bp_to_, -41bp_to_FJ830375, V00496_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | C1KH65P01009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.53e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.53e-51 | 42 |
defensive cell | 5.22e-44 | 48 |
phagocyte | 5.22e-44 | 48 |
myeloid leukocyte | 8.02e-35 | 72 |
monopoietic cell | 5.64e-34 | 59 |
monocyte | 5.64e-34 | 59 |
monoblast | 5.64e-34 | 59 |
promonocyte | 5.64e-34 | 59 |
macrophage dendritic cell progenitor | 1.11e-32 | 61 |
myeloid lineage restricted progenitor cell | 8.73e-30 | 66 |
granulocyte monocyte progenitor cell | 2.94e-29 | 67 |
myeloid cell | 4.39e-21 | 108 |
common myeloid progenitor | 4.39e-21 | 108 |
leukocyte | 2.35e-18 | 136 |
nongranular leukocyte | 9.48e-18 | 115 |
hepatocyte | 9.88e-17 | 12 |
hematopoietic lineage restricted progenitor cell | 2.82e-15 | 120 |
hematopoietic stem cell | 1.49e-13 | 168 |
hematopoietic oligopotent progenitor cell | 3.14e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.14e-13 | 161 |
hematopoietic cell | 1.62e-12 | 177 |
mesenchymal cell | 6.29e-07 | 354 |
intermediate monocyte | 8.83e-07 | 9 |
CD14-positive, CD16-positive monocyte | 8.83e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.99e-25 | 76 |
bone element | 7.17e-23 | 82 |
skeletal element | 2.49e-20 | 90 |
hematopoietic system | 5.66e-20 | 98 |
blood island | 5.66e-20 | 98 |
immune system | 1.72e-19 | 93 |
skeletal system | 1.00e-17 | 100 |
hemolymphoid system | 1.43e-17 | 108 |
liver | 7.91e-17 | 19 |
digestive gland | 7.91e-17 | 19 |
liver bud | 7.91e-17 | 19 |
epithelium of foregut-midgut junction | 3.89e-15 | 25 |
anatomical boundary | 3.89e-15 | 25 |
hepatobiliary system | 3.89e-15 | 25 |
foregut-midgut junction | 3.89e-15 | 25 |
septum transversum | 3.89e-15 | 25 |
hepatic diverticulum | 2.72e-14 | 22 |
liver primordium | 2.72e-14 | 22 |
digestive tract diverticulum | 1.36e-13 | 23 |
epithelial sac | 2.30e-12 | 25 |
sac | 8.03e-12 | 26 |
exocrine gland | 1.24e-09 | 31 |
exocrine system | 1.24e-09 | 31 |
abdomen element | 1.07e-08 | 54 |
abdominal segment element | 1.07e-08 | 54 |
musculoskeletal system | 2.24e-08 | 167 |
endocrine gland | 2.44e-08 | 35 |
abdominal segment of trunk | 1.41e-07 | 60 |
abdomen | 1.41e-07 | 60 |
lateral plate mesoderm | 1.94e-07 | 203 |
gut epithelium | 3.71e-07 | 54 |