FFCP PHASE1:Hg19::chr2:27938593..27938615,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:27938593..27938615,- to FFCP PHASE1:Hg19::chr2:27938593..27938615,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B7WNW1 | |UniProt=B7WNW1 | ||
|association_with_transcript=0bp_to_ENST00000379677,uc002rll.1_5end | |||
|cluster_id=chr2:27938593..27938615,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_1_at_ENST00000379677_5end,CAGE_peak_1_at_uc002rll.1_5end | |||
|id=chr2:27938593..27938615,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;1.61e-14;1!CL:1000746;1.78e-08;7!CL:1000612;1.78e-08;7!CL:0000650;6.57e-08;2!CL:1000500;6.57e-08;2!CL:1000618;6.57e-08;2!CL:1001318;6.57e-08;2!CL:0002173;6.57e-08;2!CL:0002600;6.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.41e-14,1;CL:1000746,2.07e-08,7;CL:1000612,2.07e-08,7;CL:0002600,7.52e-08,2;CL:0000650,9.19e-08,2;CL:1000500,9.19e-08,2;CL:1000618,9.19e-08,2;CL:1001318,9.19e-08,2;CL:0002173,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008814;6.57e-08;2!UBERON:0010056;6.57e-08;2 | |||
|ontology_enrichment_disease=DOID:0050687!2.82e-07!143;DOID:305!4.50e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3910;4.23e-08;2!DOID:4468;6.57e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,4.09e-08,2;DOID:4468,4.69e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.78e-08;7!UBERON:0001229;1.78e-08;7!UBERON:0004903;4.23e-08;2!UBERON:0002173;4.23e-08;2!UBERON:0002186;4.23e-08;2!UBERON:0002370;6.57e-08;2!UBERON:0000078;6.57e-08;2!UBERON:0003567;6.57e-08;2!UBERON:0005058;6.57e-08;2!UBERON:0003838;6.57e-08;2!UBERON:0003586;6.57e-08;2!UBERON:0005169;6.57e-08;2!UBERON:0002321;6.57e-08;2!UBERON:0002012;6.57e-08;2!UBERON:0005215;6.57e-08;2!UBERON:0002303;6.57e-08;2!UBERON:0008886;6.57e-08;2!UBERON:0002319;6.57e-08;2!UBERON:0009113;6.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001042,2.05e-12,10;UBERON:0009145,2.05e-12,10;UBERON:0006562,2.43e-11,11;UBERON:0003351,1.32e-09,6;UBERON:0010532,2.07e-08,7;UBERON:0000074,2.07e-08,7;UBERON:0001229,2.07e-08,7;UBERON:0001230,2.07e-08,7;UBERON:0003220,2.07e-08,7;UBERON:0005749,2.07e-08,7;UBERON:0004199,2.07e-08,7;UBERON:0004209,2.07e-08,7;UBERON:0004198,2.07e-08,7;UBERON:0004903,4.09e-08,2;UBERON:0002173,4.09e-08,2;UBERON:0002186,4.09e-08,2;UBERON:0000078,8.04e-08,2;UBERON:0007497,8.04e-08,2;UBERON:0003643,8.04e-08,2;UBERON:0003504,8.04e-08,2;UBERON:0003469,8.04e-08,2;UBERON:0003496,8.04e-08,2;UBERON:0002012,8.04e-08,2;UBERON:0008886,8.04e-08,2;UBERON:0007303,8.04e-08,2;UBERON:0002061,8.04e-08,2;UBERON:0005432,8.04e-08,2;UBERON:0004363,8.04e-08,2;UBERON:0003567,9.19e-08,2;UBERON:0003838,9.19e-08,2;UBERON:0003586,9.19e-08,2;UBERON:0005169,9.19e-08,2;UBERON:0002321,9.19e-08,2;UBERON:0005215,9.19e-08,2;UBERON:0002303,9.19e-08,2;UBERON:0002319,9.19e-08,2;UBERON:0005103,1.82e-07,8;UBERON:0000083,1.82e-07,8;UBERON:0009201,1.82e-07,8;UBERON:0006553,1.82e-07,8;UBERON:0003074,1.82e-07,8;UBERON:0003060,1.82e-07,8;UBERON:0008814,3.86e-07,18;UBERON:0000072,5.57e-07,47;UBERON:0000058,7.64e-07,19;UBERON:0001557,8.63e-07,19;UBERON:0000080,9.93e-07,9;UBERON:0002120,9.93e-07,9;UBERON:0004875,9.93e-07,9;UBERON:0005721,9.93e-07,9;UBERON:0005754,9.93e-07,9;UBERON:0007297,9.93e-07,9 | |||
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| ||
|short_description=p1@ENST00000379677,p1@uc002rll.1 | |||
}} | }} |
Latest revision as of 18:16, 16 September 2015
Short description: | p1@ENST00000379677, p1@uc002rll.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000379677_5end, CAGE_peak_1_at_uc002rll.1_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_ENST00000379677, uc002rll.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.41e-14 | 1 |
glomerular cell | 2.07e-08 | 7 |
kidney corpuscule cell | 2.07e-08 | 7 |
smooth muscle cell of trachea | 7.52e-08 | 2 |
mesangial cell | 9.19e-08 | 2 |
kidney interstitial cell | 9.19e-08 | 2 |
juxtaglomerular complex cell | 9.19e-08 | 2 |
renal interstitial pericyte | 9.19e-08 | 2 |
extraglomerular mesangial cell | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.09e-08 | 2 |
clear cell adenocarcinoma | 4.69e-08 | 2 |