FFCP PHASE1:Hg19::chr9:14909966..14909990,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158326 | |EntrezGene=158326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23399 | |HGNC=23399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=243bp_to_uc003zlm.2_5end | |association_with_transcript=243bp_to_uc003zlm.2_5end | ||
|cluster_id=chr9:14909966..14909990,- | |||
|coexpression_cluster_id=C1288 | |coexpression_cluster_id=C1288 | ||
|description=CAGE_peak_1_at_FREM1_5end | |description=CAGE_peak_1_at_FREM1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002274!1.15e-08!5;CL:0000457!1.15e-08!5;CL:0002191!1.15e-08!5;CL:0000097!1.15e-08!5;CL:0000831!1.15e-08!5;CL:0002028!1.15e-08!5 | |ontology_enrichment_celltype=CL:0002274!1.15e-08!5;CL:0000457!1.15e-08!5;CL:0002191!1.15e-08!5;CL:0000097!1.15e-08!5;CL:0000831!1.15e-08!5;CL:0002028!1.15e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.90e-15;5!CL:0000163;2.07e-08;9 | |ontology_enrichment_celltype_v019=CL:0000097;1.90e-15;5!CL:0000163;2.07e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.99e-16,5;CL:0002028,9.99e-16,5;CL:0000163,1.47e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.21e-07;2 | |ontology_enrichment_development_v019=UBERON:0007297;1.21e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.69e-34!115;UBERON:0002346!1.06e-08!90;UBERON:0001049!2.35e-08!57;UBERON:0005068!2.35e-08!57;UBERON:0006241!2.35e-08!57;UBERON:0007135!2.35e-08!57;UBERON:0003075!4.23e-07!86;UBERON:0007284!4.23e-07!86;UBERON:0002616!4.31e-07!59;UBERON:0005743!8.22e-07!86;UBERON:0001017!9.17e-07!82 | |ontology_enrichment_uberon=UBERON:0007023!1.69e-34!115;UBERON:0002346!1.06e-08!90;UBERON:0001049!2.35e-08!57;UBERON:0005068!2.35e-08!57;UBERON:0006241!2.35e-08!57;UBERON:0007135!2.35e-08!57;UBERON:0003075!4.23e-07!86;UBERON:0007284!4.23e-07!86;UBERON:0002616!4.31e-07!59;UBERON:0005743!8.22e-07!86;UBERON:0001017!9.17e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;6.67e-11;49!UBERON:0006947;1.11e-10;3!UBERON:0004054;1.11e-10;3!UBERON:0002050;2.15e-10;5!UBERON:0005423;2.15e-10;5!UBERON:0000160;7.46e-09;17!UBERON:0005904;4.32e-08;4!UBERON:0002346;1.15e-07;4!UBERON:0000923;1.15e-07;4!UBERON:0010316;1.15e-07;4!UBERON:0005291;1.15e-07;4!UBERON:0000341;9.25e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000922;6.67e-11;49!UBERON:0006947;1.11e-10;3!UBERON:0004054;1.11e-10;3!UBERON:0002050;2.15e-10;5!UBERON:0005423;2.15e-10;5!UBERON:0000160;7.46e-09;17!UBERON:0005904;4.32e-08;4!UBERON:0002346;1.15e-07;4!UBERON:0000923;1.15e-07;4!UBERON:0010316;1.15e-07;4!UBERON:0005291;1.15e-07;4!UBERON:0000341;9.25e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.53e-13,114;UBERON:0006947,1.13e-10,3;UBERON:0004054,1.13e-10,3;UBERON:0000160,6.14e-09,17;UBERON:0005904,4.38e-08,4;UBERON:0000341,9.55e-07,2 | |||
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| ||
|short_description=p1@FREM1 | |short_description=p1@FREM1 | ||
}} | }} |
Latest revision as of 18:43, 16 September 2015
Short description: | p1@FREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FREM1_5end |
Coexpression cluster: | C1288_kidney_neuroectodermal_uterus_Mast_skin_rhabdomyosarcoma_ductus |
Association with transcript: | 243bp_to_uc003zlm.2_5end |
EntrezGene: | FREM1 |
HGNC: | 23399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.99e-16 | 5 |
basophil mast progenitor cell | 9.99e-16 | 5 |
endocrine cell | 1.47e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.53e-13 | 114 |
male genital duct | 1.13e-10 | 3 |
internal male genitalia | 1.13e-10 | 3 |
intestine | 6.14e-09 | 17 |
duct of male reproductive system | 4.38e-08 | 4 |
throat | 9.55e-07 | 2 |