FFCP PHASE1:Hg19::chr20:48429213..48429230,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23315 | |EntrezGene=23315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20728 | |HGNC=20728 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2E8 | |UniProt=Q9Y2E8 | ||
|association_with_transcript=-19bp_to_ENST00000417961,NM_015266,uc002xuv.1,uc010gib.1,uc010zyj.1,uc010zyk.1,uc010zyl.1,uc010zym.1_5end | |association_with_transcript=-19bp_to_ENST00000417961,NM_015266,uc002xuv.1,uc010gib.1,uc010zyj.1,uc010zyk.1,uc010zyl.1,uc010zym.1_5end | ||
|cluster_id=chr20:48429213..48429230,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_4_at_SLC9A8_5end | |description=CAGE_peak_4_at_SLC9A8_5end | ||
|id=chr20:48429213..48429230,+ | |id=chr20:48429213..48429230,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.22e-29!42;CL:0000860!1.17e-27!45;CL:0000766!2.13e-25!76;CL:0000557!2.20e-23!71;CL:0000738!6.88e-21!140;CL:0000839!8.35e-21!70;CL:0002009!1.25e-20!65;CL:0002194!2.09e-19!63;CL:0000576!2.09e-19!63;CL:0000040!2.09e-19!63;CL:0000559!2.09e-19!63;CL:0002031!8.64e-17!124;CL:0002087!3.53e-15!119;CL:0000763!7.87e-14!112;CL:0000049!7.87e-14!112;CL:0000037!4.39e-13!172;CL:0000566!4.39e-13!172;CL:0002032!4.34e-12!165;CL:0000837!4.34e-12!165;CL:0000988!1.20e-11!182;CL:0002393!7.97e-07!9;CL:0002397!7.97e-07!9 | |ontology_enrichment_celltype=CL:0002057!2.22e-29!42;CL:0000860!1.17e-27!45;CL:0000766!2.13e-25!76;CL:0000557!2.20e-23!71;CL:0000738!6.88e-21!140;CL:0000839!8.35e-21!70;CL:0002009!1.25e-20!65;CL:0002194!2.09e-19!63;CL:0000576!2.09e-19!63;CL:0000040!2.09e-19!63;CL:0000559!2.09e-19!63;CL:0002031!8.64e-17!124;CL:0002087!3.53e-15!119;CL:0000763!7.87e-14!112;CL:0000049!7.87e-14!112;CL:0000037!4.39e-13!172;CL:0000566!4.39e-13!172;CL:0002032!4.34e-12!165;CL:0000837!4.34e-12!165;CL:0000988!1.20e-11!182;CL:0002393!7.97e-07!9;CL:0002397!7.97e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.68e-51;33!CL:0002057;5.68e-51;33!CL:0000576;2.00e-36;48!CL:0000473;1.10e-34;39!CL:0000234;1.10e-34;39!CL:0000766;1.91e-28;69!CL:0002087;2.98e-14;104!CL:0000763;2.63e-12;100!CL:0000094;1.30e-11;8!CL:0000738;1.28e-10;136!CL:0002393;6.13e-10;6!CL:0002397;6.13e-10;6!CL:0000081;4.94e-08;11!CL:0000988;1.14e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.37e-69,42;CL:0002057,1.37e-69,42;CL:0000473,5.01e-59,48;CL:0000234,5.01e-59,48;CL:0000766,6.47e-57,72;CL:0000557,4.70e-51,67;CL:0000738,2.64e-49,136;CL:0002009,2.61e-47,61;CL:0000839,8.41e-45,66;CL:0002194,2.75e-44,59;CL:0000576,2.75e-44,59;CL:0000040,2.75e-44,59;CL:0000559,2.75e-44,59;CL:0002031,7.13e-40,120;CL:0002087,1.73e-38,115;CL:0000037,2.15e-38,168;CL:0000763,2.65e-37,108;CL:0000049,2.65e-37,108;CL:0002032,9.66e-36,161;CL:0000837,9.66e-36,161;CL:0000988,2.48e-35,177;CL:0002393,2.28e-14,9;CL:0002397,2.28e-14,9;CL:0000134,4.62e-12,354;CL:0000094,1.14e-11,8;CL:0002320,2.00e-11,361;CL:0000219,3.21e-09,386;CL:0000081,4.50e-08,11;CL:0000048,8.11e-08,427;CL:0000034,8.97e-08,441;CL:0000723,1.95e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;8.60e-50;42!CL:0000049;1.01e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.19e-24!102;UBERON:0003061!8.19e-24!102;UBERON:0002193!1.17e-23!112;UBERON:0002371!2.18e-19!80;UBERON:0001474!3.35e-17!86;UBERON:0002405!8.45e-15!115;UBERON:0004765!9.04e-15!101;UBERON:0001434!9.04e-15!101;UBERON:0003081!3.38e-10!216;UBERON:0002204!2.92e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-08;15!UBERON:0000179;1.22e-08;15!UBERON:0000463;1.22e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.76e-48,98;UBERON:0003061,3.76e-48,98;UBERON:0002371,4.82e-45,76;UBERON:0002193,1.19e-43,108;UBERON:0001474,2.22e-42,82;UBERON:0004765,3.37e-37,90;UBERON:0002405,1.53e-35,93;UBERON:0001434,6.87e-35,100;UBERON:0003081,1.05e-18,203;UBERON:0002204,7.31e-18,167;UBERON:0002384,1.46e-10,371;UBERON:0000926,2.85e-09,315;UBERON:0004120,2.85e-09,315;UBERON:0006603,2.85e-09,315;UBERON:0000178,1.20e-08,15;UBERON:0000179,1.20e-08,15;UBERON:0000463,1.20e-08,15 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0,0.491467873003018,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.229240217243854,0.0821005894499457,0.0787107813136792,6.29382842958246,3.45446458287491,2.94150634300544,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,1.17440175733939,5.53995408531877,2.80762226458198,5.4252717678963,0.223915474239924,0.32389366601898,0,4.79814187972564,3.02300754951048,3.88134497900506,6.0431549595478,4.11167888021826,7.74265927237759,12.0830804775303,7.68482119587302,8.0403958162119,9.3081333798887,6.45484683583826,12.1883837934908,6.96496656307637,2.18324920046277,3.82029923556644,5.50951006267625,3.85114832491312,6.39337125799041,4.94776950280074,7.77908264724364,5.11469700639233,6.96502172708602,3.97169657283798,4.9825779919646,15.8286659111748,13.037072960505,9.55630916702513,4.84319602106695,6.2607198117886,4.74693581161327,1.05627643155971,1.70083439972035,2.09658645508376,2.02191536063691,2.4028302854641,1.92870704036496,5.41524213108372,2.78483348078726,2.92262646023414,0,0,0,2.98711155796555,1.60158394814405,0,0,0,2.84606484554724,1.76171156811282,1.91136614062614,2.64342657158052,1.12101712596307,0,2.360517241366,3.53709686474248,1.43921049299656,0.167186495390678,0.32592226663359,0.473447805734733,0,0.445641827540694,0,0.221533894583621,0.270803863765016,0.384273959177026,0.780356085359269,0.493313713811028,0.552700035571697,0.289803085735052,0.14828656316206,0,0,0,0.766440987203842,1.03088233644789,0.253019692019503,0,0,0,0.451725357233318,0,0,0,0,2.01606743224732,1.87208137048455,3.33096128930438,0,0.670700859703636,0.255725123687061,0,0,0,0,0.973269740605272,0.0945348171640679,0,0,0.130979075497713,0,0.370784442784429,0,0.174129737299267,0.398873881556595,0.476981248610684,0,0.74291500265913,0,0,0,1.13061588384802,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0.949265659568129,0,10.5424333948851,11.6334079244498,0,0.496971951695318,0,0.662045904066094,1.43418310374407,0,1.12135520028461,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0.204154171254893,0,0,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0.250237039743928,0.554128230968366,0.438977620880838,0,0,0.340296549480063,0.358779271377724,0,0,0.300091096084402,0,0.257640540045629,0,0.675105328965065,0,0,0.184099797284599,0,0.355009592516614,0,0,0.57978255948989,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.661763836394364,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0.858486162094873,0.492434012174795,0,0.297262324577456,0,0.335964256397719,0,0.179117045405697,0.290633938513962,0,0.985326475791887,0.264145302039678,2.69526550203004,3.02651902175619,4.4184851699233,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,1.74306691720059,0.799783929456456,0,0.502257091432126,0,0,0,0,0.289562613335158,0.410952645100767,0.358121926479791,0.112085143993527,2.75843064282698,3.01878604803324,3.20857590699371,0,0,0,0,0,17.2271615507852,0,19.8919446449297,0,0,0,0.415941723061614,0.356857977594324,0.473107245101804,0.35142424497814,0.300946099727719,0,0,0,0.368738337083406,0.521301686808497,0,0.343143423810856,1.44737618286021,2.5885704098234,1.38745825144478,0.909382714338778,0,0.30239029332968,0.248107807818777,0.306923946576125,0,0.128139149255701,1.02341449813341,0.321707842287215,0,0.154209693802656,0.355123450626254,0.164254312027618,0,0,0.120859449591622,0.200506470303285,0.368323955743585,0.229628896329213,0,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0,0,0,0.501689773854853,1.78413391131527,3.3243040357149,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0.082509499920588,0,0.650060246036521,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0,0,0.255679882248303,0.0890320356467374,0.165284915360978,0,0.382838137483752,0.4046311234222,0,1.25924938732256,0,0.924100740528266,0.532306030317022,0.869932992075073,0.18532421910392,0.429374660225974,0.372158369359667,0,0.38126038784765,0,0.42793898803392,0.95460974377781,0,0.179872457583315,0,0.235624804691373,0.606547444719948,0,0,0,0.243713489631284,0,0,0.282810863907425,0,1.65409603063837,0,0,1.15755106853338,0,0.405820753925408,0.30982349809975,0,0,0.196498082026242,0.35667105148125,0,1.89996871767898,1.31717957183961,1.13841952129715,0,0.0962221127255121,0,0,0.0941438007767792,0,1.68471475667626,0,0.229723400206959,0,0.764637207142375,1.13929437434833,1.42939065274673,2.46817363851717,1.94541993357815,1.08006287447623,3.96562588147135,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0.201799707191048,0,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| ||
|short_description=p4@SLC9A8 | |short_description=p4@SLC9A8 | ||
}} | }} |
Latest revision as of 20:06, 16 September 2015
Short description: | p4@SLC9A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC9A8_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -19bp_to_ENST00000417961, NM_015266, uc002xuv.1, uc010gib.1, uc010zyj.1, uc010zyk.1, uc010zyl.1, uc010zym.1_5end |
EntrezGene: | SLC9A8 |
HGNC: | 20728 |
UniProt: | Q9Y2E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.76e-48 | 98 |
blood island | 3.76e-48 | 98 |
bone marrow | 4.82e-45 | 76 |
hemolymphoid system | 1.19e-43 | 108 |
bone element | 2.22e-42 | 82 |
skeletal element | 3.37e-37 | 90 |
immune system | 1.53e-35 | 93 |
skeletal system | 6.87e-35 | 100 |
lateral plate mesoderm | 1.05e-18 | 203 |
musculoskeletal system | 7.31e-18 | 167 |
connective tissue | 1.46e-10 | 371 |
mesoderm | 2.85e-09 | 315 |
mesoderm-derived structure | 2.85e-09 | 315 |
presumptive mesoderm | 2.85e-09 | 315 |
blood | 1.20e-08 | 15 |
haemolymphatic fluid | 1.20e-08 | 15 |
organism substance | 1.20e-08 | 15 |