FFCP PHASE1:Hg19::chr16:50313426..50313459,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:50313426..50313459,+ | |||
|coexpression_cluster_id=C3567 | |||
|description=CAGE_peak_at_chr16:50313426..50313459,+ | |description=CAGE_peak_at_chr16:50313426..50313459,+ | ||
|id=chr16:50313426..50313459,+ | |id=chr16:50313426..50313459,+ | ||
|ontology_enrichment_celltype=CL:0000557!2.16e-68!71;CL:0002009!6.63e-66!65;CL:0000766!2.86e-65!76;CL:0000839!1.18e-64!70;CL:0002194!2.01e-63!63;CL:0000576!2.01e-63!63;CL:0000040!2.01e-63!63;CL:0000559!2.01e-63!63;CL:0000763!1.35e-59!112;CL:0000049!1.35e-59!112;CL:0002057!3.60e-58!42;CL:0000860!3.49e-53!45;CL:0000037!9.40e-48!172;CL:0000566!9.40e-48!172;CL:0000738!1.01e-46!140;CL:0002032!4.83e-45!165;CL:0000837!4.83e-45!165;CL:0000988!1.02e-44!182;CL:0002031!5.71e-44!124;CL:0002087!3.80e-42!119;CL:0002393!1.43e-13!9;CL:0002397!1.43e-13!9;CL:0000134!7.02e-11!358;CL:0002320!3.32e-10!365;CL:0000219!2.72e-08!390;CL:0000840!8.20e-07!5;CL:0001029!8.20e-07!5 | |ontology_enrichment_celltype=CL:0000557!2.16e-68!71;CL:0002009!6.63e-66!65;CL:0000766!2.86e-65!76;CL:0000839!1.18e-64!70;CL:0002194!2.01e-63!63;CL:0000576!2.01e-63!63;CL:0000040!2.01e-63!63;CL:0000559!2.01e-63!63;CL:0000763!1.35e-59!112;CL:0000049!1.35e-59!112;CL:0002057!3.60e-58!42;CL:0000860!3.49e-53!45;CL:0000037!9.40e-48!172;CL:0000566!9.40e-48!172;CL:0000738!1.01e-46!140;CL:0002032!4.83e-45!165;CL:0000837!4.83e-45!165;CL:0000988!1.02e-44!182;CL:0002031!5.71e-44!124;CL:0002087!3.80e-42!119;CL:0002393!1.43e-13!9;CL:0002397!1.43e-13!9;CL:0000134!7.02e-11!358;CL:0002320!3.32e-10!365;CL:0000219!2.72e-08!390;CL:0000840!8.20e-07!5;CL:0001029!8.20e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.70e-81;33!CL:0002057;2.70e-81;33!CL:0000473;9.79e-77;39!CL:0000234;9.79e-77;39!CL:0000576;4.70e-69;48!CL:0000766;1.65e-54;69!CL:0000763;1.84e-25;100!CL:0000738;2.55e-18;136!CL:0002087;2.06e-17;104!CL:0002393;5.73e-17;6!CL:0002397;5.73e-17;6!CL:0000840;1.76e-12;5!CL:0000235;2.54e-11;6!CL:0000988;7.97e-11;177!CL:0000875;3.17e-10;3!CL:0002396;3.17e-10;3!CL:0000767;1.48e-09;3!CL:0000226;4.69e-09;3!CL:0000842;4.69e-09;3!CL:0000097;1.08e-08;5!CL:0000990;3.51e-08;8!CL:0000219;5.97e-08;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,6.46e-132,67;CL:0000766,3.10e-127,72;CL:0002009,3.72e-126,61;CL:0000839,7.64e-125,66;CL:0000473,1.54e-124,48;CL:0000234,1.54e-124,48;CL:0002194,3.27e-121,59;CL:0000576,3.27e-121,59;CL:0000040,3.27e-121,59;CL:0000559,3.27e-121,59;CL:0000860,2.15e-114,42;CL:0002057,2.15e-114,42;CL:0000763,6.00e-93,108;CL:0000049,6.00e-93,108;CL:0000738,3.85e-76,136;CL:0002031,1.58e-70,120;CL:0002087,1.84e-66,115;CL:0000037,2.24e-63,168;CL:0002032,7.33e-60,161;CL:0000837,7.33e-60,161;CL:0000988,2.00e-59,177;CL:0002393,2.44e-25,9;CL:0002397,2.44e-25,9;CL:0000134,2.32e-22,354;CL:0002320,1.22e-21,361;CL:0000219,4.31e-19,386;CL:0000048,5.61e-16,427;CL:0000723,1.51e-15,433;CL:0000034,5.42e-15,441;CL:0000840,2.04e-12,5;CL:0001029,2.04e-12,5;CL:0000235,1.91e-11,6;CL:0000875,3.27e-10,3;CL:0002396,3.27e-10,3;CL:0000767,1.57e-09,3;CL:0000226,4.02e-09,3;CL:0000842,4.02e-09,3;CL:0000097,9.92e-09,5;CL:0002028,9.92e-09,5;CL:0000990,3.85e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.50e-81;42!CL:0000049;1.67e-25;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.88e-66!102;UBERON:0003061!1.88e-66!102;UBERON:0002193!8.37e-62!112;UBERON:0002371!3.20e-58!80;UBERON:0001474!2.84e-54!86;UBERON:0002405!2.13e-45!115;UBERON:0004765!1.98e-44!101;UBERON:0001434!1.98e-44!101;UBERON:0003081!8.62e-24!216;UBERON:0002204!5.96e-21!167;UBERON:0002384!9.84e-10!375;UBERON:0007023!1.43e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.29e-115,76;UBERON:0002390,2.89e-110,98;UBERON:0003061,2.89e-110,98;UBERON:0001474,1.51e-105,82;UBERON:0002193,8.15e-99,108;UBERON:0002405,3.11e-98,93;UBERON:0004765,4.88e-95,90;UBERON:0001434,3.06e-84,100;UBERON:0003081,5.57e-46,203;UBERON:0002204,4.82e-45,167;UBERON:0000926,1.89e-24,315;UBERON:0004120,1.89e-24,315;UBERON:0006603,1.89e-24,315;UBERON:0002384,1.18e-20,371;UBERON:0000923,3.92e-07,560;UBERON:0010316,3.92e-07,560;UBERON:0005291,3.92e-07,560;UBERON:0006598,3.92e-07,560;UBERON:0010317,3.92e-07,560;UBERON:0002532,3.92e-07,560;UBERON:0002050,5.58e-07,564 | |||
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|short_description=p@chr16:50313426..50313459,+ | |short_description=p@chr16:50313426..50313459,+ | ||
}} | }} |
Latest revision as of 20:23, 16 September 2015
Short description: | p@chr16:50313426..50313459, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50313426..50313459, + |
Coexpression cluster: | C3567_CD14_Dendritic_CD14CD16_Monocytederived_Basophils_blood_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.29e-115 | 76 |
hematopoietic system | 2.89e-110 | 98 |
blood island | 2.89e-110 | 98 |
bone element | 1.51e-105 | 82 |
hemolymphoid system | 8.15e-99 | 108 |
immune system | 3.11e-98 | 93 |
skeletal element | 4.88e-95 | 90 |
skeletal system | 3.06e-84 | 100 |
lateral plate mesoderm | 5.57e-46 | 203 |
musculoskeletal system | 4.82e-45 | 167 |
mesoderm | 1.89e-24 | 315 |
mesoderm-derived structure | 1.89e-24 | 315 |
presumptive mesoderm | 1.89e-24 | 315 |
connective tissue | 1.18e-20 | 371 |
germ layer | 3.92e-07 | 560 |
germ layer / neural crest | 3.92e-07 | 560 |
embryonic tissue | 3.92e-07 | 560 |
presumptive structure | 3.92e-07 | 560 |
germ layer / neural crest derived structure | 3.92e-07 | 560 |
epiblast (generic) | 3.92e-07 | 560 |
embryonic structure | 5.58e-07 | 564 |