FFCP PHASE1:Hg19::chr12:121418693..121418707,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:121418693..121418707,- to FFCP PHASE1:Hg19::chr12:121418693..121418707,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=26785 | |HGNC=26785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000537361_5end | |||
|cluster_id=chr12:121418693..121418707,- | |||
|description=CAGE_peak_2_at_HNF1A-AS1_5end | |||
|id=chr12:121418693..121418707,- | |||
|ontology_enrichment_celltype=CL:0000181!7.26e-13!12;CL:0000417!7.26e-13!12;CL:0000668!7.26e-13!12;CL:0000414!7.26e-13!12;CL:0000412!7.26e-13!12;CL:0000182!7.26e-13!12;CL:0002322!1.14e-09!5;CL:0000223!9.37e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.04e-18;12!CL:0002178;6.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.01e-17,12;CL:0000223,4.45e-12,58;CL:0002178,6.36e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.32e-26;13!UBERON:0004161;4.55e-25;11!UBERON:0003104;3.83e-18;31!UBERON:0001041;7.07e-13;30!CL:0000223;2.60e-07;58!UBERON:0006595;7.73e-07;86 | |||
|ontology_enrichment_disease=DOID:299!5.02e-11!25;DOID:305!2.82e-08!106;DOID:3493!1.42e-07!2;DOID:4468!4.49e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:299;1.03e-12;25!DOID:3493;7.12e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,9.10e-13,25;DOID:305,8.73e-11,106;DOID:3493,6.96e-10,2;DOID:0050687,7.21e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!8.65e-19!129;UBERON:0004185!8.65e-19!129;UBERON:0005409!1.53e-17!35;UBERON:0001007!1.74e-15!155;UBERON:0001555!1.74e-15!155;UBERON:0007026!1.74e-15!155;UBERON:0009854!4.43e-15!23;UBERON:0000160!9.58e-15!27;UBERON:0009497!9.80e-14!25;UBERON:0000015!9.80e-14!25;UBERON:0002423!9.80e-14!25;UBERON:0006235!9.80e-14!25;UBERON:0004161!9.80e-14!25;UBERON:0004119!1.64e-13!169;UBERON:0000925!1.64e-13!169;UBERON:0006595!1.64e-13!169;UBERON:0009856!4.66e-13!26;UBERON:0008835!5.34e-13!22;UBERON:0003894!5.34e-13!22;UBERON:0002107!1.65e-12!19;UBERON:0006925!1.65e-12!19;UBERON:0008836!1.65e-12!19;UBERON:0007499!3.45e-11!25;UBERON:0000077!4.24e-11!130;UBERON:0000059!1.41e-10!11;UBERON:0003929!4.73e-10!54;UBERON:0005177!6.06e-10!107;UBERON:0005172!7.57e-10!55;UBERON:0005173!7.57e-10!55;UBERON:0001155!2.91e-09!9;UBERON:0001041!4.01e-09!98;UBERON:0005057!1.13e-08!26;UBERON:0002417!1.54e-08!61;UBERON:0000916!1.54e-08!61;UBERON:0005911!2.30e-08!82;UBERON:0000466!2.32e-08!126;UBERON:0009569!3.02e-07!113;UBERON:0002365!5.30e-07!31;UBERON:0002330!5.30e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.70e-31;22!UBERON:0000160;8.04e-24;17!UBERON:0002423;1.58e-19;25!UBERON:0004921;1.84e-18;33!UBERON:0002107;1.37e-17;19!UBERON:0006925;1.37e-17;19!UBERON:0000059;1.61e-14;11!UBERON:0001155;1.31e-12;9!UBERON:0001007;6.92e-11;81!UBERON:0002365;6.48e-10;31!UBERON:0002330;6.48e-10;31!UBERON:0002108;5.33e-09;4!UBERON:0000945;6.27e-09;5!UBERON:0010039;6.27e-09;5!UBERON:0004907;1.17e-08;5!UBERON:0002368;1.66e-08;33!UBERON:0000949;1.55e-07;43!UBERON:0005172;1.62e-07;52!UBERON:0005173;1.62e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.30e-27,25;UBERON:0000160,8.35e-24,17;UBERON:0009854,2.87e-21,23;UBERON:0004921,1.36e-19,118;UBERON:0009497,1.80e-19,25;UBERON:0000015,1.80e-19,25;UBERON:0002423,1.80e-19,25;UBERON:0006235,1.80e-19,25;UBERON:0004161,1.80e-19,25;UBERON:0009856,1.47e-18,26;UBERON:0008835,2.51e-18,22;UBERON:0003894,2.51e-18,22;UBERON:0002107,1.57e-17,19;UBERON:0006925,1.57e-17,19;UBERON:0008836,1.57e-17,19;UBERON:0001007,2.41e-16,145;UBERON:0001555,2.41e-16,145;UBERON:0007026,2.41e-16,145;UBERON:0007499,6.70e-16,25;UBERON:0000059,1.61e-14,11;UBERON:0004119,3.03e-14,160;UBERON:0000925,3.03e-14,160;UBERON:0006595,3.03e-14,160;UBERON:0003929,3.96e-13,54;UBERON:0001155,1.29e-12,9;UBERON:0005172,2.47e-11,54;UBERON:0005173,2.47e-11,54;UBERON:0005911,2.76e-10,82;UBERON:0002365,3.91e-10,31;UBERON:0002330,3.91e-10,31;UBERON:0002417,6.27e-10,60;UBERON:0000916,6.27e-10,60;UBERON:0000949,8.77e-10,45;UBERON:0002108,5.41e-09,4;UBERON:0005177,6.19e-09,101;UBERON:0002368,8.45e-09,35;UBERON:0004907,1.14e-08,5;UBERON:0011216,2.37e-08,223;UBERON:0001041,3.20e-08,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6019245761871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.580969714347592,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,0,4.13552934676983,0,8.24022538238861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,4.53380451249978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33061483573184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86565405061372,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,6.90709788827869,17.383359601945,0,0,0,0,2.14825409610731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0.652931232636591,3.1097675715467,0,8.95735737970654,6.19202951523374,10.3875124638716,0,0,0,0,0,0,0,0,0,0,14.5188859258397,0,0,0,0,0,0,0,0,6.83062910471503,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,12.3802736948824,0,10.3745100350956,0,5.14784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,41.9385418298834,4.01794229766841,3.04938676010316,4.65084452593876,12.2050077078288,0,0,0,0,0,0,0,0,0,0,6.54087370583345,14.4250117371245,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81035807563014,1.32506888912221,0,0,7.35673402902616,0,0.106787412567695,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35610581599509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,6.25211208986474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,6.39211104356647,3.23891386827932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92163899910286,2.35560560676583,7.68082927388297,0,0,0,0,0,0,0,0,0,0,4.47610117026079,9.61662066217412,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5168194123259,0,0,0,0,0,13.225671012885,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,1.97615444634491,0,2.5670703278402,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6019245761871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.580969714347592,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,0,4.13552934676983,0,8.24022538238861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,4.53380451249978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33061483573184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86565405061372,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,6.90709788827869,17.383359601945,0,0,0,0,2.14825409610731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0.652931232636591,3.1097675715467,0,8.95735737970654,6.19202951523374,10.3875124638716,0,0,0,0,0,0,0,0,0,0,14.5188859258397,0,0,0,0,0,0,0,0,6.83062910471503,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,12.3802736948824,0,10.3745100350956,0,5.14784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,41.9385418298834,4.01794229766841,3.04938676010316,4.65084452593876,12.2050077078288,0,0,0,0,0,0,0,0,0,0,6.54087370583345,14.4250117371245,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81035807563014,1.32506888912221,0,0,7.35673402902616,0,0.106787412567695,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35610581599509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,6.25211208986474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,6.39211104356647,3.23891386827932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92163899910286,2.35560560676583,7.68082927388297,0,0,0,0,0,0,0,0,0,0,4.47610117026079,9.61662066217412,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5168194123259,0,0,0,0,0,13.225671012885,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,1.97615444634491,0,2.5670703278402,0.406896178315738,0,0,0 | ||
|short_description=p2@HNF1A-AS1 | |||
}} | }} |
Latest revision as of 21:08, 16 September 2015
Short description: | p2@HNF1A-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HNF1A-AS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000537361_5end |
EntrezGene: | NA |
HGNC: | 26785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.01e-17 | 12 |
endodermal cell | 4.45e-12 | 58 |
epithelial cell of stomach | 6.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 9.10e-13 | 25 |
carcinoma | 8.73e-11 | 106 |
signet ring cell adenocarcinoma | 6.96e-10 | 2 |
cell type cancer | 7.21e-08 | 143 |