FFCP PHASE1:Hg19::chr14:99947158..99947161,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:99947158..99947161,- to FFCP PHASE1:Hg19::chr14:99947158..99947161,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84193 | |EntrezGene=84193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20493 | |HGNC=20493 | ||
|TSSclassifier=strong | |||
|UniProt=C9K0W5 | |UniProt=C9K0W5 | ||
|association_with_transcript=12bp_to_ENST00000357563_5end | |||
|cluster_id=chr14:99947158..99947161,- | |||
|description=CAGE_peak_5_at_SETD3_5end | |||
|id=chr14:99947158..99947161,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000840;5.41e-16;5!CL:0000990;1.03e-10;8!CL:0000451;8.73e-09;10!CL:0002032;3.00e-07;1!CL:0000557;3.00e-07;1!CL:0002581;3.00e-07;1!CL:0000895;3.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,3.70e-16,5;CL:0001029,3.70e-16,5;CL:0000990,8.04e-11,8;CL:0000451,7.14e-09,10;CL:0002581,2.23e-07,1;CL:0000810,5.19e-07,1;CL:0000895,5.19e-07,1;CL:0002436,5.19e-07,1;CL:0002427,5.19e-07,1;CL:0002428,5.19e-07,1;CL:0002429,5.19e-07,1;CL:0002433,5.19e-07,1;CL:0002431,5.19e-07,1;CL:0002432,5.19e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.05e-07;1!CL:0002427;3.00e-07;1!UBERON:0008801;3.00e-07;1!UBERON:0005425;3.00e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;3.00e-07;1!UBERON:0002135;3.00e-07;1!UBERON:0000941;3.00e-07;1!UBERON:0001301;3.00e-07;1!UBERON:0004913;3.00e-07;1!UBERON:0001785;3.00e-07;1!UBERON:0002464;3.00e-07;1!UBERON:0004904;3.00e-07;1!UBERON:0003703;3.00e-07;1!UBERON:0001021;3.00e-07;1!UBERON:0001567;3.00e-07;1!UBERON:0001174;3.00e-07;1!UBERON:0004914;3.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,1.20e-07,1;UBERON:0001301,1.63e-07,1;UBERON:0000941,2.37e-07,1;UBERON:0001785,2.37e-07,1;UBERON:0002464,2.37e-07,1;UBERON:0004904,2.37e-07,1;UBERON:0001021,2.37e-07,1;UBERON:0003902,2.37e-07,1;UBERON:0005425,2.37e-07,1;UBERON:0004913,4.34e-07,1;UBERON:0003703,4.34e-07,1;UBERON:0001174,4.34e-07,1;UBERON:0004914,4.34e-07,1;UBERON:0001831,5.84e-07,1;UBERON:0001567,5.84e-07,1;UBERON:0008801,5.84e-07,1 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0.893922188854576,0,0,0,0,0.491467873003018,0,0.218441372130172,0.263766978228454,0.37129905888014,0.662794751455832,0,0,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0.229240217243854,0.246301768349837,0.157421562627358,0,0.767658796194425,0.154816123316076,0,0,0.369754010166788,0.309868802321207,0.284338464974843,0.587200878669695,0.553995408531877,0.401088894940283,0.217010870715852,0.447830948479849,0.971680998056939,0.515151135268373,0.726991193897824,0,0.242584061187816,0.697287110717054,0,0.619412741790207,0,0,0.236482229888585,0,0,2.70852973188684,0.376484679085209,0,0.224723484445085,0.612167784741805,0,0.639337125799041,0,0.598390972864896,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0,0,0.425208599930087,0.209658645508376,0.22465726229299,0.450530678524519,0.48217676009124,0.570025487482497,0.59675003159727,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0.954053754535364,0,0.587237189370939,0,0,0,0.526768169550154,0.196709770113833,0,0,0.334372990781356,0,0,0,0.334231370655521,0,0,0.541607727530031,0.25618263945135,0.390178042679635,0,0,0.579606171470105,0.14828656316206,0.535081656179426,1.04535523804977,0.226618685395132,1.14966148080576,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0.511450247374121,0,0,0.434539556882471,0,0.486634870302636,0.189069634328136,0,0.175669571386252,0.458426764241994,0.364295288292542,0.370784442784429,1.9472843619281,1.39303789839414,1.06366368415092,0.715471872916026,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0.626984899610432,1.03366703667732,1.77883131343355,0,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0.892997282840798,0.22452937262617,0.450445921933289,0,0,0,1.31780417436063,0,0.436094052142534,0.496971951695318,0.633152558322899,0,0.286836620748814,0,0,0,0.98667019366864,0.311211035399766,0.67355336034844,0.163461903113459,0,0.576175924479999,0,0,0.570471821544449,0.298897361103602,0.587172493218824,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0.375355559615893,0.277064115484183,0,0.30648779579902,0.45071417671979,0.794025282120147,0.358779271377724,0.427114777637135,0,0,0.412210116953756,0.257640540045629,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0.368199594569197,0.161646056818812,0,0.10075209822764,0,0,0.818238361772504,0,0.243947412259191,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0.330881918197182,0.217879444092406,0.237270619111097,0.134831308160164,0,0.38474715694639,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0,0.368965315629341,0,0.439001141634502,0,0.201057944823262,0.277765335475589,0,0,0,0.231860809950154,0.234817388471643,0.433099343283221,0.462985512576611,0.761016608938393,0,0,0.738651018262192,1.17002132569619,0.594524649154913,0,0,0.425325291727159,0.0895585227028483,0,0,0,0,0.414656231081544,0,0.25248486685276,0.253991577168676,0.763976851116555,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0.871533458600294,0.199945982364114,2.43247561282381,0,0,0.718874566474748,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0.224170287987055,0,0.431255149719035,0.385029108839245,0,0,0,0.167516265334349,0,0,0,1.24324654030811,0.24538298343828,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0.347534457872331,0,0,0.206768026122887,0.647142602455851,0.213455115606889,0.606255142892519,1.66435439510497,0.30239029332968,0.248107807818777,0,0.280660094433074,0.256278298511402,0.511707249066704,0.482561763430822,1.48418066444991,0.154209693802656,0.355123450626254,0.246381468041427,0,0,0.120859449591622,0,0.460404944679482,0.114814448164607,0,0.393373244878272,0.902399225814824,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0.764628819135115,0,0,0.438519753291869,0,0,0,0.325378394664303,0.412164046590889,0,0.082509499920588,0,0,0,0,0.462145851343933,0.307007349452259,0,0,0,0,0.267096106940212,0.165284915360978,0.384380134730212,0.510450849978337,0.30347334256665,0,0,0,0,0.532306030317022,0.869932992075073,0.18532421910392,0.143124886741991,0.744316738719335,0,0.38126038784765,0,0.42793898803392,0.318203247925937,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0.608731130888112,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0.379473173765715,0,0.192444225451024,0.670302275535787,0,0.376575203107117,0,0,0,1.37834040124176,0.507447609232169,0,0,0.476463550915578,0,0,0,0,0.3204722133824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| ||
|short_description=p5@SETD3 | |||
}} | }} |
Latest revision as of 21:26, 16 September 2015
Short description: | p5@SETD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SETD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000357563_5end |
EntrezGene: | SETD3 |
HGNC: | 20493 |
UniProt: | C9K0W5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 3.70e-16 | 5 |
common dendritic progenitor | 3.70e-16 | 5 |
conventional dendritic cell | 8.04e-11 | 8 |
dendritic cell | 7.14e-09 | 10 |
perirenal preadipocyte | 2.23e-07 | 1 |
CD4-positive, alpha-beta thymocyte | 5.19e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.19e-07 | 1 |
mature CD4 single-positive thymocyte | 5.19e-07 | 1 |
resting double-positive thymocyte | 5.19e-07 | 1 |
double-positive blast | 5.19e-07 | 1 |
CD69-positive double-positive thymocyte | 5.19e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 5.19e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.19e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 5.19e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 1.20e-07 | 1 |
epididymis | 1.63e-07 | 1 |
cranial nerve II | 2.37e-07 | 1 |
cranial nerve | 2.37e-07 | 1 |
nerve trunk | 2.37e-07 | 1 |
nerve connecting eye with brain | 2.37e-07 | 1 |
nerve | 2.37e-07 | 1 |
retinal neural layer | 2.37e-07 | 1 |
presumptive neural retina | 2.37e-07 | 1 |
hepatopancreatic ampulla | 4.34e-07 | 1 |
extrahepatic bile duct | 4.34e-07 | 1 |
common bile duct | 4.34e-07 | 1 |
duodenal papilla | 4.34e-07 | 1 |
parotid gland | 5.84e-07 | 1 |
cheek | 5.84e-07 | 1 |
parotid gland primordium | 5.84e-07 | 1 |