FFCP PHASE1:Hg19::chr1:245809477..245809487,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:245809477..245809487,+
|short_description=p18@KIF26B
|description=CAGE_peak_18_at_KIF26B_5end
|association_with_transcript=83bp_to_ENST00000483253,uc001ibh...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55083 | |EntrezGene=55083 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25484 | |HGNC=25484 | ||
|TSSclassifier=strong | |||
|UniProt=Q2KJY2 | |UniProt=Q2KJY2 | ||
|association_with_transcript=83bp_to_ENST00000483253,uc001ibh.1_5end | |||
|cluster_id=chr1:245809477..245809487,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_18_at_KIF26B_5end | |||
|id=chr1:245809477..245809487,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.68e-27!24;CL:0000826!4.68e-27!24;CL:0000542!2.05e-18!53;CL:0000051!2.05e-18!53;CL:0000080!6.23e-17!6;CL:0000838!3.02e-15!52;CL:0000946!8.64e-12!1;CL:0000786!8.64e-12!1;CL:0000980!8.64e-12!1;CL:0000988!9.55e-11!182;CL:0000453!3.90e-09!5;CL:0000738!6.71e-09!140;CL:0002087!2.32e-07!119;CL:0002032!2.76e-07!165;CL:0000837!2.76e-07!165;CL:0000037!6.45e-07!172;CL:0000566!6.45e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.90e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.90e-10,24;CL:0000826,6.90e-10,24;CL:0000838,5.38e-08,52;CL:0000542,7.49e-08,53;CL:0000051,7.49e-08,53;CL:0000988,8.50e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!5.05e-12!1;DOID:0050177!5.05e-12!1;DOID:0050427!5.05e-12!1;DOID:12603!1.47e-11!1;DOID:0060058!3.87e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:630;9.79e-26;1!DOID:0050177;9.79e-26;1!DOID:0050427;9.79e-26;1!DOID:0060058;7.48e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,9.79e-26,1;DOID:0050177,9.79e-26,1;DOID:0050427,9.79e-26,1;DOID:0060058,6.94e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002331!2.20e-10!10;UBERON:0000358!2.20e-10!10;UBERON:0000307!2.20e-10!10;UBERON:0000091!2.20e-10!10;UBERON:0000087!2.20e-10!10;UBERON:0007806!2.20e-10!10;UBERON:0008780!2.20e-10!10;UBERON:0005728!2.20e-10!10;UBERON:0000178!4.40e-07!15;UBERON:0000179!4.40e-07!15;UBERON:0000463!4.40e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.52e-23;10!UBERON:0000178;1.02e-15;15!UBERON:0000179;1.02e-15;15!UBERON:0000463;1.02e-15;15!UBERON:0002390;1.18e-12;32!UBERON:0000478;4.35e-10;24!UBERON:0002106;1.35e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.52e-23,10;UBERON:0000358,3.52e-23,10;UBERON:0000307,3.52e-23,10;UBERON:0000091,3.52e-23,10;UBERON:0000087,3.52e-23,10;UBERON:0007010,3.52e-23,10;UBERON:0007806,3.52e-23,10;UBERON:0008780,3.52e-23,10;UBERON:0005728,3.52e-23,10;UBERON:0000178,1.02e-15,15;UBERON:0000179,1.02e-15,15;UBERON:0000463,1.02e-15,15;UBERON:0000478,4.35e-10,24;UBERON:0002106,1.30e-09,3;UBERON:0004854,1.30e-09,3;UBERON:0009034,1.30e-09,3;UBERON:0002095,1.30e-09,3;UBERON:0004782,1.30e-09,3;UBERON:0003281,1.30e-09,3;UBERON:0009664,1.30e-09,3;UBERON:0002296,1.30e-09,3;UBERON:0005602,1.30e-09,3;UBERON:0001179,1.30e-09,3;UBERON:0006293,1.30e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,1.14940825229924,0.708397031823113,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.93042257361244,10.7500626883457,10.2333510515346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62887354279315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46151118057075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69841120997308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,1.14940825229924,0.708397031823113,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.93042257361244,10.7500626883457,10.2333510515346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62887354279315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46151118057075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69841120997308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | ||
|short_description=p18@KIF26B | |||
}} | }} |
Latest revision as of 21:55, 16 September 2015
Short description: | p18@KIF26B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_KIF26B_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 83bp_to_ENST00000483253, uc001ibh.1_5end |
EntrezGene: | KIF26B |
HGNC: | 25484 |
UniProt: | Q2KJY2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.90e-10 | 24 |
pro-B cell | 6.90e-10 | 24 |
lymphoid lineage restricted progenitor cell | 5.38e-08 | 52 |
lymphocyte | 7.49e-08 | 53 |
common lymphoid progenitor | 7.49e-08 | 53 |
hematopoietic cell | 8.50e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.52e-23 | 10 |
blastocyst | 3.52e-23 | 10 |
blastula | 3.52e-23 | 10 |
bilaminar disc | 3.52e-23 | 10 |
inner cell mass | 3.52e-23 | 10 |
cleaving embryo | 3.52e-23 | 10 |
connecting stalk | 3.52e-23 | 10 |
inner cell mass derived epiblast | 3.52e-23 | 10 |
extraembryonic mesoderm | 3.52e-23 | 10 |
blood | 1.02e-15 | 15 |
haemolymphatic fluid | 1.02e-15 | 15 |
organism substance | 1.02e-15 | 15 |
extraembryonic structure | 4.35e-10 | 24 |
spleen | 1.30e-09 | 3 |
gastrointestinal system mesentery | 1.30e-09 | 3 |
stomach region | 1.30e-09 | 3 |
mesentery | 1.30e-09 | 3 |
gastrointestinal system serosa | 1.30e-09 | 3 |
mesentery of stomach | 1.30e-09 | 3 |
gut mesentery | 1.30e-09 | 3 |
dorsal mesentery | 1.30e-09 | 3 |
dorsal mesogastrium | 1.30e-09 | 3 |
peritoneal cavity | 1.30e-09 | 3 |
spleen primordium | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 9.79e-26 | 1 |
monogenic disease | 9.79e-26 | 1 |
xeroderma pigmentosum | 9.79e-26 | 1 |
lymphoma | 6.94e-11 | 10 |