FFCP PHASE1:Hg19::chr12:121905092..121905209,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:121905092..121905209,-
|short_description=p1@KDM2B
|description=CAGE_peak_1_at_KDM2B_5end
|association_with_transcript=0bp_to_ENST00000540043,uc001uaq.2,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84678 | |EntrezGene=84678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13610 | |HGNC=13610 | ||
|TSSclassifier=strong | |||
|UniProt=B4DSN4 | |UniProt=B4DSN4 | ||
|association_with_transcript=0bp_to_ENST00000540043,uc001uaq.2,uc010szy.1_5end | |||
|cluster_id=chr12:121905092..121905209,- | |||
|description=CAGE_peak_1_at_KDM2B_5end | |||
|id=chr12:121905092..121905209,- | |||
|ontology_enrichment_celltype=CL:0000037!7.02e-30!172;CL:0000566!7.02e-30!172;CL:0000988!3.37e-28!182;CL:0002032!1.94e-27!165;CL:0000837!1.94e-27!165;CL:0002087!5.85e-21!119;CL:0000738!1.47e-18!140;CL:0000763!2.43e-18!112;CL:0000049!2.43e-18!112;CL:0002031!2.23e-17!124;CL:0000012!1.06e-15!682;CL:0000063!1.12e-15!578;CL:0000548!1.57e-14!679;CL:0000004!1.57e-14!679;CL:0000255!1.57e-14!679;CL:0002371!2.89e-13!591;CL:0000144!3.81e-13!625;CL:0002009!3.76e-12!65;CL:0000219!9.30e-12!390;CL:0002194!1.12e-11!63;CL:0000576!1.12e-11!63;CL:0000040!1.12e-11!63;CL:0000559!1.12e-11!63;CL:0000557!2.79e-11!71;CL:0000003!1.83e-10!722;CL:0000134!7.21e-10!358;CL:0002320!2.89e-09!365;CL:0000839!2.93e-09!70;CL:0000236!1.10e-08!14;CL:0000766!1.21e-08!76;CL:0000542!1.21e-08!53;CL:0000051!1.21e-08!53;CL:0000838!2.71e-08!52;CL:0000860!2.30e-07!45;CL:0002057!4.73e-07!42;CL:0000723!5.35e-07!436;CL:0000945!5.48e-07!24;CL:0000826!5.48e-07!24;CL:0000034!6.26e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.66e-09;13!CL:0000945;4.49e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.24e-29,168;CL:0000988,8.84e-28,177;CL:0002032,3.38e-27,161;CL:0000837,3.38e-27,161;CL:0002087,8.99e-21,115;CL:0000738,2.52e-18,136;CL:0000763,3.63e-18,108;CL:0000049,3.63e-18,108;CL:0002031,3.76e-17,120;CL:0002009,4.92e-12,61;CL:0002194,1.47e-11,59;CL:0000576,1.47e-11,59;CL:0000040,1.47e-11,59;CL:0000559,1.47e-11,59;CL:0000219,3.09e-11,386;CL:0000557,4.04e-11,67;CL:0000134,2.11e-09,354;CL:0000839,4.54e-09,66;CL:0002320,8.39e-09,361;CL:0000236,1.10e-08,14;CL:0000542,1.21e-08,53;CL:0000051,1.21e-08,53;CL:0000766,1.89e-08,72;CL:0000838,2.71e-08,52;CL:0000473,7.93e-08,48;CL:0000234,7.93e-08,48;CL:0000860,4.72e-07,42;CL:0002057,4.72e-07,42;CL:0000945,5.47e-07,24;CL:0000826,5.47e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000049;5.67e-07;108 | |||
|ontology_enrichment_disease=DOID:1240!3.06e-19!39;DOID:2531!2.97e-18!51;DOID:0060083!2.97e-18!51;DOID:8692!6.39e-16!31;DOID:0050686!1.28e-07!137;DOID:162!4.57e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.59e-15;31!DOID:1240;3.74e-15;39!DOID:2531;2.00e-11;51!DOID:0060083;2.00e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.05e-19,39;DOID:2531,2.96e-18,51;DOID:0060083,2.96e-18,51;DOID:8692,6.38e-16,31;DOID:0050686,1.26e-07,137;DOID:162,4.45e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.06e-09!80;UBERON:0002384!2.13e-09!375;UBERON:0001474!2.27e-09!86;UBERON:0002193!6.55e-08!112;UBERON:0002390!8.88e-08!102;UBERON:0003061!8.88e-08!102;UBERON:0002405!9.08e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.42e-09,93;UBERON:0002371,1.76e-09,76;UBERON:0001474,3.88e-09,82;UBERON:0002384,6.13e-09,371;UBERON:0002193,1.17e-07,108;UBERON:0002390,1.57e-07,98;UBERON:0003061,1.57e-07,98 | |||
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| ||
|short_description=p1@KDM2B | |||
}} | }} |
Latest revision as of 21:59, 16 September 2015
Short description: | p1@KDM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KDM2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000540043, uc001uaq.2, uc010szy.1_5end |
EntrezGene: | KDM2B |
HGNC: | 13610 |
UniProt: | B4DSN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 1.42e-09 | 93 |
bone marrow | 1.76e-09 | 76 |
bone element | 3.88e-09 | 82 |
connective tissue | 6.13e-09 | 371 |
hemolymphoid system | 1.17e-07 | 108 |
hematopoietic system | 1.57e-07 | 98 |
blood island | 1.57e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.05e-19 | 39 |
hematologic cancer | 2.96e-18 | 51 |
immune system cancer | 2.96e-18 | 51 |
myeloid leukemia | 6.38e-16 | 31 |
organ system cancer | 1.26e-07 | 137 |
cancer | 4.45e-07 | 235 |