FFCP PHASE1:Hg19::chr15:102192517..102192528,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80213 | |EntrezGene=80213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24128 | |HGNC=24128 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000558677_5end | |association_with_transcript=-17bp_to_ENST00000558677_5end | ||
|cluster_id=chr15:102192517..102192528,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_TM2D3_5end | |description=CAGE_peak_3_at_TM2D3_5end | ||
|id=chr15:102192517..102192528,- | |id=chr15:102192517..102192528,- | ||
|ontology_enrichment_celltype=CL:0000738!1.39e-22!140;CL:0002057!5.66e-22!42;CL:0000860!2.13e-21!45;CL:0002087!1.50e-19!119;CL:0000037!1.64e-19!172;CL:0000566!1.64e-19!172;CL:0002031!1.10e-18!124;CL:0002032!4.88e-17!165;CL:0000837!4.88e-17!165;CL:0000766!5.28e-17!76;CL:0000988!7.83e-17!182;CL:0002009!1.82e-15!65;CL:0002194!7.91e-15!63;CL:0000576!7.91e-15!63;CL:0000040!7.91e-15!63;CL:0000559!7.91e-15!63;CL:0000839!1.67e-14!70;CL:0000557!5.14e-14!71;CL:0000763!2.33e-12!112;CL:0000049!2.33e-12!112;CL:0000219!2.55e-08!390;CL:0000134!6.02e-08!358;CL:0002320!4.27e-07!365 | |ontology_enrichment_celltype=CL:0000738!1.39e-22!140;CL:0002057!5.66e-22!42;CL:0000860!2.13e-21!45;CL:0002087!1.50e-19!119;CL:0000037!1.64e-19!172;CL:0000566!1.64e-19!172;CL:0002031!1.10e-18!124;CL:0002032!4.88e-17!165;CL:0000837!4.88e-17!165;CL:0000766!5.28e-17!76;CL:0000988!7.83e-17!182;CL:0002009!1.82e-15!65;CL:0002194!7.91e-15!63;CL:0000576!7.91e-15!63;CL:0000040!7.91e-15!63;CL:0000559!7.91e-15!63;CL:0000839!1.67e-14!70;CL:0000557!5.14e-14!71;CL:0000763!2.33e-12!112;CL:0000049!2.33e-12!112;CL:0000219!2.55e-08!390;CL:0000134!6.02e-08!358;CL:0002320!4.27e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.53e-50;33!CL:0002057;2.53e-50;33!CL:0000473;1.09e-36;39!CL:0000234;1.09e-36;39!CL:0000576;9.32e-28;48!CL:0000766;1.15e-18;69!CL:0000094;4.32e-11;8!CL:0002087;2.46e-10;104!CL:0000763;1.44e-09;100!CL:0000738;4.24e-09;136!CL:0000081;1.04e-07;11!CL:0000624;2.18e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.85e-50,42;CL:0002057,7.85e-50,42;CL:0000473,1.46e-44,48;CL:0000234,1.46e-44,48;CL:0000766,7.20e-43,72;CL:0000738,6.13e-36,136;CL:0002194,2.89e-35,59;CL:0000576,2.89e-35,59;CL:0000040,2.89e-35,59;CL:0000559,2.89e-35,59;CL:0002009,9.86e-34,61;CL:0000839,3.61e-32,66;CL:0000557,1.63e-31,67;CL:0002087,1.98e-30,115;CL:0000037,8.41e-28,168;CL:0002031,5.10e-27,120;CL:0000988,1.83e-25,177;CL:0000763,3.87e-25,108;CL:0000049,3.87e-25,108;CL:0002032,6.06e-25,161;CL:0000837,6.06e-25,161;CL:0000094,1.58e-11,8;CL:0000134,1.70e-10,354;CL:0000219,1.92e-10,386;CL:0002320,6.19e-10,361;CL:0000723,2.01e-08,433;CL:0000048,2.68e-08,427;CL:0000081,5.18e-08,11;CL:0000034,6.42e-08,441;CL:0000624,1.23e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-35;42!CL:0000049;1.55e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.17e-12!102;UBERON:0003061!2.17e-12!102;UBERON:0001474!7.27e-12!86;UBERON:0004765!1.87e-11!101;UBERON:0001434!1.87e-11!101;UBERON:0002371!3.88e-11!80;UBERON:0002193!1.48e-09!112;UBERON:0002384!5.65e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.30e-28,76;UBERON:0001474,6.63e-28,82;UBERON:0002390,3.75e-27,98;UBERON:0003061,3.75e-27,98;UBERON:0004765,2.54e-24,90;UBERON:0002193,2.19e-23,108;UBERON:0001434,3.08e-23,100;UBERON:0002405,4.60e-22,93;UBERON:0002204,1.90e-10,167;UBERON:0002384,3.56e-09,371;UBERON:0003081,1.95e-08,203 | |||
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| ||
|short_description=p3@TM2D3 | |short_description=p3@TM2D3 | ||
}} | }} |
Latest revision as of 23:04, 16 September 2015
Short description: | p3@TM2D3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TM2D3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -17bp_to_ENST00000558677_5end |
EntrezGene: | TM2D3 |
HGNC: | 24128 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.85e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.85e-50 | 42 |
defensive cell | 1.46e-44 | 48 |
phagocyte | 1.46e-44 | 48 |
myeloid leukocyte | 7.20e-43 | 72 |
leukocyte | 6.13e-36 | 136 |
monopoietic cell | 2.89e-35 | 59 |
monocyte | 2.89e-35 | 59 |
monoblast | 2.89e-35 | 59 |
promonocyte | 2.89e-35 | 59 |
macrophage dendritic cell progenitor | 9.86e-34 | 61 |
myeloid lineage restricted progenitor cell | 3.61e-32 | 66 |
granulocyte monocyte progenitor cell | 1.63e-31 | 67 |
nongranular leukocyte | 1.98e-30 | 115 |
hematopoietic stem cell | 8.41e-28 | 168 |
hematopoietic lineage restricted progenitor cell | 5.10e-27 | 120 |
hematopoietic cell | 1.83e-25 | 177 |
myeloid cell | 3.87e-25 | 108 |
common myeloid progenitor | 3.87e-25 | 108 |
hematopoietic oligopotent progenitor cell | 6.06e-25 | 161 |
hematopoietic multipotent progenitor cell | 6.06e-25 | 161 |
granulocyte | 1.58e-11 | 8 |
mesenchymal cell | 1.70e-10 | 354 |
motile cell | 1.92e-10 | 386 |
connective tissue cell | 6.19e-10 | 361 |
somatic stem cell | 2.01e-08 | 433 |
multi fate stem cell | 2.68e-08 | 427 |
blood cell | 5.18e-08 | 11 |
stem cell | 6.42e-08 | 441 |
CD4-positive, alpha-beta T cell | 1.23e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.30e-28 | 76 |
bone element | 6.63e-28 | 82 |
hematopoietic system | 3.75e-27 | 98 |
blood island | 3.75e-27 | 98 |
skeletal element | 2.54e-24 | 90 |
hemolymphoid system | 2.19e-23 | 108 |
skeletal system | 3.08e-23 | 100 |
immune system | 4.60e-22 | 93 |
musculoskeletal system | 1.90e-10 | 167 |
connective tissue | 3.56e-09 | 371 |
lateral plate mesoderm | 1.95e-08 | 203 |