FFCP PHASE1:Hg19::chr9:21994344..21994440,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:21994344..21994440,-
|short_description=p1@CDKN2A
|description=CAGE_peak_1_at_CDKN2A_5end
|association_with_transcript=49bp_to_ENST00000530628,NM_058195_5e...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1029 | |EntrezGene=1029 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1787 | |HGNC=1787 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N726 | |UniProt=Q8N726 | ||
|association_with_transcript=49bp_to_ENST00000530628,NM_058195_5end | |||
|cluster_id=chr9:21994344..21994440,- | |||
|coexpression_cluster_id=C4814 | |||
|description=CAGE_peak_1_at_CDKN2A_5end | |||
|id=chr9:21994344..21994440,- | |||
|ontology_enrichment_celltype=CL:0000548!5.39e-18!679;CL:0000004!5.39e-18!679;CL:0000255!5.39e-18!679;CL:0000012!3.26e-17!682;CL:0000003!1.60e-15!722;CL:0000066!1.47e-11!254;CL:0000063!1.05e-10!578;CL:0002371!3.98e-10!591;CL:0000144!9.29e-08!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.21e-12,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005085!4.80e-08!29;UBERON:0001737!8.56e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.18e-07;9!UBERON:0001557;7.18e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005085,2.26e-07,31;UBERON:0003102,3.55e-07,99;UBERON:0001737,7.23e-07,9 | |||
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| ||
|short_description=p1@CDKN2A | |||
}} | }} |
Latest revision as of 23:21, 16 September 2015
Short description: | p1@CDKN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDKN2A_5end |
Coexpression cluster: | C4814_papillotubular_gall_prostate_lens_myeloma_transitionalcell_acute |
Association with transcript: | 49bp_to_ENST00000530628, NM_058195_5end |
EntrezGene: | CDKN2A |
HGNC: | 1787 |
UniProt: | Q8N726 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.21e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
ectodermal placode | 2.26e-07 | 31 |
surface structure | 3.55e-07 | 99 |
larynx | 7.23e-07 | 9 |