FFCP PHASE1:Hg19::chr8:144911476..144911517,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:144911476..144911517,-
|short_description=p1@PUF60
|description=CAGE_peak_1_at_PUF60_5end
|association_with_transcript=0bp_to_ENST00000526151,ENST000005264...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22827 | |EntrezGene=22827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17042 | |HGNC=17042 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQ56,E9PL19 | |UniProt=E9PQ56,E9PL19 | ||
|association_with_transcript=0bp_to_ENST00000526151,ENST00000526459,ENST00000527197,ENST00000532127,ENST00000533162_5end | |||
|cluster_id=chr8:144911476..144911517,- | |||
|coexpression_cluster_id=C1671 | |||
|description=CAGE_peak_1_at_PUF60_5end | |||
|id=chr8:144911476..144911517,- | |||
|ontology_enrichment_celltype=CL:0002321!4.16e-18!248;CL:0000220!1.30e-17!246;CL:0000012!6.24e-14!682;CL:0000222!1.04e-13!119;CL:0000548!1.16e-13!679;CL:0000004!1.16e-13!679;CL:0000255!1.16e-13!679;CL:0000066!1.02e-11!254;CL:0000144!2.89e-10!625;CL:0000183!5.71e-10!59;CL:0000055!7.57e-10!180;CL:0000003!1.51e-09!722;CL:0000393!1.54e-08!60;CL:0000211!1.54e-08!60;CL:0000187!9.39e-08!54;CL:0002371!1.12e-07!591;CL:0000115!1.67e-07!35;CL:0000680!2.03e-07!57;CL:0000056!2.03e-07!57;CL:0000355!2.03e-07!57;CL:1000449!2.15e-07!16;CL:0000213!6.49e-07!57;CL:0000215!6.49e-07!57;CL:0002681!8.88e-07!13;CL:0002584!8.88e-07!13;CL:0002078!8.93e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.42e-07;15!CL:0002681;5.50e-07;12!CL:0002584;5.50e-07;12!CL:0000115;5.59e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.51e-18,250;CL:0000222,3.99e-14,121;CL:0000066,1.10e-11,253;CL:0000393,1.61e-08,61;CL:0000211,1.61e-08,61;CL:0000115,5.75e-08,36;CL:0000187,9.81e-08,55;CL:1000449,1.30e-07,15;CL:0000680,2.09e-07,58;CL:0000056,2.09e-07,58;CL:0000355,2.09e-07,58;CL:0000213,2.66e-07,58;CL:0000215,2.66e-07,58;CL:0002078,3.42e-07,45;CL:0002681,4.95e-07,12;CL:0002584,4.95e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.00e-12!118;UBERON:0002049!4.96e-10!79;UBERON:0007798!4.96e-10!79;UBERON:0000119!4.75e-09!312;UBERON:0004872!5.23e-09!84;UBERON:0000486!5.30e-09!82;UBERON:0004290!8.00e-09!70;UBERON:0000483!1.62e-08!309;UBERON:0000055!1.96e-08!69;UBERON:0001981!3.92e-08!60;UBERON:0007500!3.92e-08!60;UBERON:0004537!3.92e-08!60;UBERON:0006965!3.92e-08!60;UBERON:0000490!6.83e-08!138;UBERON:0001637!1.96e-07!42;UBERON:0003509!1.96e-07!42;UBERON:0004572!1.96e-07!42;UBERON:0004211!2.15e-07!16;UBERON:0001285!2.15e-07!16;UBERON:0007684!2.15e-07!16;UBERON:0003220!2.15e-07!16;UBERON:0004208!2.15e-07!16;UBERON:0000914!2.18e-07!83;UBERON:0002329!2.18e-07!83;UBERON:0003077!2.18e-07!83;UBERON:0003059!2.18e-07!83;UBERON:0007282!2.18e-07!83;UBERON:0009618!2.18e-07!83;UBERON:0007285!2.18e-07!83;UBERON:0001009!2.30e-07!113;UBERON:0004535!3.91e-07!110;UBERON:0005256!3.99e-07!143;UBERON:0006555!8.22e-07!17;UBERON:0005103!8.22e-07!17;UBERON:0000083!8.22e-07!17;UBERON:0009201!8.22e-07!17;UBERON:0004819!8.22e-07!17;UBERON:0006553!8.22e-07!17;UBERON:0003074!8.22e-07!17;UBERON:0003060!8.22e-07!17;UBERON:0001225!8.88e-07!13;UBERON:0008987!8.88e-07!13;UBERON:0001134!9.51e-07!61;UBERON:0002036!9.51e-07!61;UBERON:0003082!9.51e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;9.29e-08;74!UBERON:0006555;1.42e-07;15!UBERON:0004819;1.42e-07;15!UBERON:0001285;1.42e-07;15!UBERON:0007684;1.42e-07;15!UBERON:0000353;1.45e-07;15!UBERON:0000072;5.21e-07;37!UBERON:0001225;5.50e-07;12!UBERON:0008987;5.50e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.05e-12,117;UBERON:0007503,8.48e-12,78;UBERON:0002049,1.18e-10,78;UBERON:0007798,1.18e-10,78;UBERON:0000119,2.01e-10,309;UBERON:0000483,7.57e-10,306;UBERON:0000490,9.91e-10,148;UBERON:0004872,1.44e-09,83;UBERON:0000055,4.94e-09,68;UBERON:0000486,5.33e-09,83;UBERON:0003077,7.27e-09,72;UBERON:0007285,7.27e-09,72;UBERON:0002329,8.20e-09,71;UBERON:0003059,8.20e-09,71;UBERON:0007282,8.20e-09,71;UBERON:0004290,8.20e-09,71;UBERON:0009618,8.20e-09,71;UBERON:0007500,9.09e-09,59;UBERON:0001981,9.09e-09,59;UBERON:0004537,9.09e-09,59;UBERON:0006965,9.09e-09,59;UBERON:0007524,1.29e-08,73;UBERON:0001009,8.78e-08,112;UBERON:0000353,1.25e-07,15;UBERON:0004211,1.30e-07,15;UBERON:0009773,1.30e-07,15;UBERON:0001231,1.30e-07,15;UBERON:0001285,1.30e-07,15;UBERON:0007684,1.30e-07,15;UBERON:0004208,1.30e-07,15;UBERON:0004535,1.50e-07,109;UBERON:0001637,1.96e-07,42;UBERON:0003509,1.96e-07,42;UBERON:0004572,1.96e-07,42;UBERON:0001225,4.95e-07,12;UBERON:0008987,4.95e-07,12;UBERON:0006555,5.53e-07,16;UBERON:0004819,5.53e-07,16;UBERON:0001134,9.58e-07,62;UBERON:0002036,9.58e-07,62;UBERON:0003082,9.58e-07,62 | |||
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|short_description=p1@PUF60 | |||
}} | }} |
Latest revision as of 23:22, 16 September 2015
Short description: | p1@PUF60 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PUF60_5end |
Coexpression cluster: | C1671_Alveolar_Mesenchymal_Renal_Pericytes_Fibroblast_Placental_Smooth |
Association with transcript: | 0bp_to_ENST00000526151, ENST00000526459, ENST00000527197, ENST00000532127, ENST00000533162_5end |
EntrezGene: | PUF60 |
HGNC: | 17042 |
UniProt: | E9PQ56E9PL19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.51e-18 | 250 |
mesodermal cell | 3.99e-14 | 121 |
epithelial cell | 1.10e-11 | 253 |
electrically responsive cell | 1.61e-08 | 61 |
electrically active cell | 1.61e-08 | 61 |
endothelial cell | 5.75e-08 | 36 |
muscle cell | 9.81e-08 | 55 |
epithelial cell of nephron | 1.30e-07 | 15 |
muscle precursor cell | 2.09e-07 | 58 |
myoblast | 2.09e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.09e-07 | 58 |
lining cell | 2.66e-07 | 58 |
barrier cell | 2.66e-07 | 58 |
meso-epithelial cell | 3.42e-07 | 45 |
kidney cortical cell | 4.95e-07 | 12 |
renal cortical epithelial cell | 4.95e-07 | 12 |