FFCP PHASE1:Hg19::chr17:66342708..66342727,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22901 | |EntrezGene=22901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24102 | |HGNC=24102 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQ74 | |UniProt=B4DQ74 | ||
|association_with_transcript=-221bp_to_ENST00000448504_5end | |association_with_transcript=-221bp_to_ENST00000448504_5end | ||
|cluster_id=chr17:66342708..66342727,+ | |||
|description=CAGE_peak_9_at_ARSG_5end | |description=CAGE_peak_9_at_ARSG_5end | ||
|id=chr17:66342708..66342727,+ | |id=chr17:66342708..66342727,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.18e-44!140;CL:0002087!2.59e-36!119;CL:0000037!6.10e-35!172;CL:0000566!6.10e-35!172;CL:0000988!3.71e-32!182;CL:0002032!4.12e-31!165;CL:0000837!4.12e-31!165;CL:0002031!3.57e-28!124;CL:0002057!1.89e-26!42;CL:0000860!3.21e-24!45;CL:0000084!6.89e-24!25;CL:0000827!6.89e-24!25;CL:0000766!6.62e-22!76;CL:0000542!1.69e-17!53;CL:0000051!1.69e-17!53;CL:0000791!9.27e-17!18;CL:0000789!9.27e-17!18;CL:0002420!9.27e-17!18;CL:0002419!9.27e-17!18;CL:0000790!9.27e-17!18;CL:0000838!2.49e-16!52;CL:0000094!2.20e-15!8;CL:0002194!5.03e-15!63;CL:0000576!5.03e-15!63;CL:0000040!5.03e-15!63;CL:0000559!5.03e-15!63;CL:0002009!2.26e-14!65;CL:0000763!3.03e-14!112;CL:0000049!3.03e-14!112;CL:0000839!6.61e-13!70;CL:0000557!1.22e-12!71;CL:0000081!7.82e-11!11;CL:0000625!8.69e-10!11;CL:0000775!5.27e-09!3;CL:0000134!5.96e-09!358;CL:0002320!1.64e-08!365;CL:0000623!5.26e-08!3;CL:0000825!5.26e-08!3;CL:0000898!1.02e-07!3;CL:0000842!4.78e-07!3;CL:0000219!5.50e-07!390 | |ontology_enrichment_celltype=CL:0000738!1.18e-44!140;CL:0002087!2.59e-36!119;CL:0000037!6.10e-35!172;CL:0000566!6.10e-35!172;CL:0000988!3.71e-32!182;CL:0002032!4.12e-31!165;CL:0000837!4.12e-31!165;CL:0002031!3.57e-28!124;CL:0002057!1.89e-26!42;CL:0000860!3.21e-24!45;CL:0000084!6.89e-24!25;CL:0000827!6.89e-24!25;CL:0000766!6.62e-22!76;CL:0000542!1.69e-17!53;CL:0000051!1.69e-17!53;CL:0000791!9.27e-17!18;CL:0000789!9.27e-17!18;CL:0002420!9.27e-17!18;CL:0002419!9.27e-17!18;CL:0000790!9.27e-17!18;CL:0000838!2.49e-16!52;CL:0000094!2.20e-15!8;CL:0002194!5.03e-15!63;CL:0000576!5.03e-15!63;CL:0000040!5.03e-15!63;CL:0000559!5.03e-15!63;CL:0002009!2.26e-14!65;CL:0000763!3.03e-14!112;CL:0000049!3.03e-14!112;CL:0000839!6.61e-13!70;CL:0000557!1.22e-12!71;CL:0000081!7.82e-11!11;CL:0000625!8.69e-10!11;CL:0000775!5.27e-09!3;CL:0000134!5.96e-09!358;CL:0002320!1.64e-08!365;CL:0000623!5.26e-08!3;CL:0000825!5.26e-08!3;CL:0000898!1.02e-07!3;CL:0000842!4.78e-07!3;CL:0000219!5.50e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.37e-44;8!CL:0000775;3.17e-43;3!CL:0000081;1.73e-32;11!CL:0000771;8.65e-30;2!CL:0002127;1.66e-15;1!CL:0000911;1.66e-15;1!CL:0000814;1.66e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.25e-44,8;CL:0000775,2.56e-43,3;CL:0000081,1.62e-32,11;CL:0000771,9.31e-30,2;CL:0002127,1.78e-15,1;CL:0000914,1.78e-15,1;CL:0000911,1.78e-15,1;CL:0000814,1.78e-15,1;CL:0002042,1.78e-15,1;CL:0002039,1.78e-15,1;CL:0002040,1.78e-15,1;CL:0002041,1.78e-15,1;CL:0000738,1.81e-11,136;CL:0000037,4.61e-09,168;CL:0000988,1.53e-08,177;CL:0000893,2.15e-08,2;CL:0002489,2.15e-08,2;CL:0000809,2.15e-08,2;CL:0000808,2.15e-08,2;CL:0000894,2.15e-08,2;CL:0000806,2.15e-08,2;CL:0000807,2.15e-08,2;CL:0000805,2.15e-08,2;CL:0002425,2.15e-08,2;CL:0002032,9.45e-08,161;CL:0000837,9.45e-08,161;CL:0000766,9.17e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002425;2.07e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.78e-19!102;UBERON:0003061!6.78e-19!102;UBERON:0002193!7.22e-19!112;UBERON:0002370!9.20e-11!4;UBERON:0005058!9.20e-11!4;UBERON:0009113!9.20e-11!4;UBERON:0003295!9.20e-11!4;UBERON:0005562!9.20e-11!4;UBERON:0002371!1.53e-10!80;UBERON:0002405!1.61e-10!115;UBERON:0001474!2.14e-09!86;UBERON:0002384!6.45e-08!375;UBERON:0004765!3.64e-07!101;UBERON:0001434!3.64e-07!101;UBERON:0003351!3.92e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.30e-29;2!UBERON:0005058;9.30e-29;2!UBERON:0009113;9.30e-29;2!UBERON:0004177;3.97e-12;5!UBERON:0005057;3.97e-12;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.33e-32,4;UBERON:0005058,7.33e-32,4;UBERON:0009113,7.33e-32,4;UBERON:0003295,7.33e-32,4;UBERON:0005562,7.33e-32,4;UBERON:0003351,1.69e-21,6;UBERON:0004177,1.57e-18,7;UBERON:0005057,1.57e-18,7;UBERON:0000974,3.58e-13,10;UBERON:0003408,3.58e-13,10;UBERON:0001042,3.58e-13,10;UBERON:0009145,3.58e-13,10;UBERON:0006562,4.96e-12,11;UBERON:0009722,4.96e-12,11;UBERON:0007690,4.96e-12,11;UBERON:0008814,1.43e-07,18;UBERON:0001557,3.36e-07,19 | |||
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| ||
|short_description=p9@ARSG | |short_description=p9@ARSG | ||
}} | }} |
Latest revision as of 23:46, 16 September 2015
Short description: | p9@ARSG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ARSG_5end |
Coexpression cluster: | NA |
Association with transcript: | -221bp_to_ENST00000448504_5end |
EntrezGene: | ARSG |
HGNC: | 24102 |
UniProt: | B4DQ74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.25e-44 | 8 |
neutrophil | 2.56e-43 | 3 |
blood cell | 1.62e-32 | 11 |
eosinophil | 9.31e-30 | 2 |
innate effector T cell | 1.78e-15 | 1 |
immature NK T cell | 1.78e-15 | 1 |
effector T cell | 1.78e-15 | 1 |
mature NK T cell | 1.78e-15 | 1 |
immature NK T cell stage IV | 1.78e-15 | 1 |
immature NK T cell stage I | 1.78e-15 | 1 |
immature NK T cell stage II | 1.78e-15 | 1 |
immature NK T cell stage III | 1.78e-15 | 1 |
leukocyte | 1.81e-11 | 136 |
hematopoietic stem cell | 4.61e-09 | 168 |
hematopoietic cell | 1.53e-08 | 177 |
thymocyte | 2.15e-08 | 2 |
double negative thymocyte | 2.15e-08 | 2 |
double-positive, alpha-beta thymocyte | 2.15e-08 | 2 |
DN4 thymocyte | 2.15e-08 | 2 |
DN1 thymic pro-T cell | 2.15e-08 | 2 |
DN2 thymocyte | 2.15e-08 | 2 |
DN3 thymocyte | 2.15e-08 | 2 |
immature single positive thymocyte | 2.15e-08 | 2 |
early T lineage precursor | 2.15e-08 | 2 |
hematopoietic oligopotent progenitor cell | 9.45e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.45e-08 | 161 |
myeloid leukocyte | 9.17e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.33e-32 | 4 |
hemolymphoid system gland | 7.33e-32 | 4 |
thymic region | 7.33e-32 | 4 |
pharyngeal gland | 7.33e-32 | 4 |
thymus primordium | 7.33e-32 | 4 |
pharyngeal epithelium | 1.69e-21 | 6 |
hemopoietic organ | 1.57e-18 | 7 |
immune organ | 1.57e-18 | 7 |
neck | 3.58e-13 | 10 |
gland of gut | 3.58e-13 | 10 |
chordate pharynx | 3.58e-13 | 10 |
pharyngeal region of foregut | 3.58e-13 | 10 |
pharynx | 4.96e-12 | 11 |
entire pharyngeal arch endoderm | 4.96e-12 | 11 |
early pharyngeal endoderm | 4.96e-12 | 11 |
pharyngeal arch system | 1.43e-07 | 18 |
upper respiratory tract | 3.36e-07 | 19 |