FFCP PHASE1:Hg19::chr17:66597499..66597516,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:66597499..66597516,-
|short_description=p1@FAM20A
|description=CAGE_peak_1_at_FAM20A_5end
|association_with_transcript=-404bp_to_ENST00000226094,NM_001243...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54757 | |EntrezGene=54757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23015 | |HGNC=23015 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MK3,B7Z4Y3,Q8IYA5 | |UniProt=Q96MK3,B7Z4Y3,Q8IYA5 | ||
|association_with_transcript=-404bp_to_ENST00000226094,NM_001243746,NM_017565,uc002jho.2,uc010wqp.1_5end | |||
|cluster_id=chr17:66597499..66597516,- | |||
|description=CAGE_peak_1_at_FAM20A_5end | |||
|id=chr17:66597499..66597516,- | |||
|ontology_enrichment_celltype=CL:0002194!6.53e-07!63;CL:0000576!6.53e-07!63;CL:0000040!6.53e-07!63;CL:0000559!6.53e-07!63 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-17!115;UBERON:0000062!2.36e-13!511;UBERON:0000468!1.16e-11!659;UBERON:0000467!1.94e-08!625;UBERON:0000480!2.75e-08!626;UBERON:0000991!4.90e-08!21;UBERON:0009196!4.90e-08!21;UBERON:0009117!4.90e-08!21;UBERON:0005564!4.90e-08!21;UBERON:0000922!5.72e-08!612;UBERON:0004176!9.27e-08!22;UBERON:0002405!3.12e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000991;5.86e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.19e-15,114;UBERON:0000991,4.47e-08,21;UBERON:0009196,4.47e-08,21;UBERON:0009117,4.47e-08,21;UBERON:0005564,4.47e-08,21;UBERON:0004176,2.01e-07,22;UBERON:0004458,4.40e-07,49 | |||
|phase1_expression=0.908391896352783,3.63970890614671,11.9811243481575,1.0007329835313,3.5756887554183,14.8297549097063,2.53299878168311,6.94891860769514,20.6336646277872,0,0,0,0,1.23766352960047,1.98838425436749,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,1.23852898652861,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.434021741431704,58.8897697251001,31.093791937822,81.3938793724029,1.59938062657521,0.377875943688809,1.94067248950253,2.09186133215116,0.411167888021826,3.09706370895104,52.6477077949535,26.1283920659683,25.7765630578558,2.75796544589295,1.29096936716765,2.70852973188684,1.31769637679823,0.818718450173537,0.449446968890169,0.612167784741805,1.60464513538047,0.639337125799041,19.1313754108295,12.9651377454061,18.7538890234385,1.7412554317715,0,0.622822248995575,67.5858909540639,25.5526630025899,26.062661364614,1.81619850790011,0.368277635987565,0.632924774881769,2.5350634357433,0.425208599930087,1.67726916406701,0,0,0,7.41033133727246,5.56966696157452,2.55729815270488,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,21.9426179682566,2.68280343881454,0,0.361439152384566,1.00267582127178,3.76600949298142,0,0.973269740605272,0.661743720148475,1.33037638477538,1.49319135678314,20.1707776266477,0,0,16.8764644700435,18.9801413656201,16.752703025377,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46063537203914,0.12663051166458,0.397227542439656,42.1649832500756,7.09336764396714,1.12135520028461,0,0,14.3157076283892,0,0.163461903113459,0,0,2.81185718200556,0.936480230490962,0,3.88566569434683,0.23486899728753,0,0,2.24569588380383,0.982674538494144,9.91927499287348,3.56400857184616,13.5996811103206,0,2.87447256726495,0.505008341862199,1.62654075833553,0,2.19488810440419,0,30.6485640169457,0,0.717558542755448,4.48470516518992,24.5841005345092,0.300091096084402,2.67936576019941,11.5938243020533,9.67807652924267,0.168776332241266,0.0974370051611986,3.02920529092937,6.81169249953015,2.7479829659198,1.77504796258307,0.10075209822764,2.54340888465731,0,0,0,69.8909336122582,60.4335743545973,41.3650436615485,33.4825207699647,83.518201639833,38.687600062038,0,0,0,16.7172454091512,8.66255378003503,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,2.94017422771084,209.145807456021,289.9340289199,119.339561149644,0,0.491953754172454,2.91665277507493,0,0,0,0,0.651616610620649,1.03993478527958,0,0,4.10930429825376,0,0,0,0,0,6.15542515218493,6.55211942389866,11.8904929830983,0,1.34385702559088,0.283550194484773,0,0,0,0,0,0.621984346622316,0.288239906833923,0.25248486685276,0.698476837213859,0,0,3.4214489204541,0,0.300343057843917,0,0,0,0,0,25.0359512096318,0,6.38251479803689,5.2003718455683,2.05765899409714,0,0,0.142977993658148,2.17048642156577,0,0.325736184293735,0,0,4.52159065589379,5.22920075160176,4.49878460319257,8.51366464488333,8.53837055434615,8.43335757932127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.613457458595699,6.00204625271613,4.6115054028955,1.24782516918484,0,0,0.117141414992713,21.367173080668,61.4000260951159,4.1389228517002,1.32845119707087,1.47495334833363,13.1194257846805,4.30762546418029,0.686286847621712,0.413536052245775,0.647142602455851,0.426910231213777,0,0,0.604780586659361,2.48107807818777,2.60885354589706,5.3325417942284,15.7611153584512,1.02341449813341,5.79074116116987,26.7152519600984,5.85996836450091,29.4752464019791,9.19824147354662,1.03850885836724,7.66988497835731,0.120859449591622,0,0,15.9592082948803,0.910455840033585,6.81846957789005,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,30.6031804593735,0,0,0,0,72.3077684298718,11.3104740401783,5.5457502161272,8.13569476048487,0.137836572484531,11.0642852214322,21.4624706993058,2.89770533214743,26.1754184801408,0,0,0,0.2023155617111,0,0,0,0.616067160352178,0.532306030317022,0.869932992075073,0,0,0,0,0.190630193923825,1.27948895655667,1.28381696410176,91.6425354026698,0,1.2591072030832,1.09814811894422,1.53156123049392,0.404364963146632,0,0.421258456238981,0,0.487426979262569,0,13.7864910522066,12.5850834438804,58.7642206425262,0,0,0,3.47265320560013,1.9676842561399,0,0.92947049429925,0,0,0,0,4.96665489698837,8.86652068250189,127.107828682522,1.89736586882858,10.1481068871045,0,0,0,26.5485518190517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.3254089635947,0,0,0,0,0,0,4.97073823883149,0.844016498463076,0,6.42735109484362,0.211125408127993,8.96615947129814,3.86797481743607,1.0077309914171,0,0,0,0,0,0,6.21453455512682,0,0,3.87733098438087,2.59750674853184,1.99613798001194,0,0,2.17499872630438,0,0,0,0,0,0,1.77148277162768,0.482385754501632,1.52581736317083,1.43753037910592,2.06883333267483,9.87234287192876,0,0.139423744278603,8.84927972793666,3.87402989879804,0,0,0.108647371922008,2.23300811812344,0.457987967009312,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,7.25352028927381,2.4441205797345,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| ||
|short_description=p1@FAM20A | |||
}} | }} |
Latest revision as of 00:32, 17 September 2015
Short description: | p1@FAM20A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM20A_5end |
Coexpression cluster: | NA |
Association with transcript: | -404bp_to_ENST00000226094, NM_001243746, NM_017565, uc002jho.2, uc010wqp.1_5end |
EntrezGene: | FAM20A |
HGNC: | 23015 |
UniProt: | Q96MK3B7Z4Y3Q8IYA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.19e-15 | 114 |
gonad | 4.47e-08 | 21 |
indifferent external genitalia | 4.47e-08 | 21 |
indifferent gonad | 4.47e-08 | 21 |
gonad primordium | 4.47e-08 | 21 |
external genitalia | 2.01e-07 | 22 |
body cavity or lining | 4.40e-07 | 49 |