FFCP PHASE1:Hg19::chr17:66597541..66597546,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54757 | |EntrezGene=54757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23015 | |HGNC=23015 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MK3,B7Z4Y3,Q8IYA5 | |UniProt=Q96MK3,B7Z4Y3,Q8IYA5 | ||
|association_with_transcript=-446bp_to_ENST00000226094,NM_001243746,NM_017565,uc002jho.2,uc010wqp.1_5end | |association_with_transcript=-446bp_to_ENST00000226094,NM_001243746,NM_017565,uc002jho.2,uc010wqp.1_5end | ||
|cluster_id=chr17:66597541..66597546,- | |||
|description=CAGE_peak_10_at_FAM20A_5end | |description=CAGE_peak_10_at_FAM20A_5end | ||
|id=chr17:66597541..66597546,- | |id=chr17:66597541..66597546,- | ||
|ontology_enrichment_celltype=CL:0002322!4.50e-07!5 | |ontology_enrichment_celltype=CL:0002322!4.50e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002619;1.87e-10;3!CL:0002581;5.39e-08;1 | |ontology_enrichment_celltype_v019=CL:0002619;1.87e-10;3!CL:0002581;5.39e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002619,1.84e-10,3;CL:0002581,3.83e-08,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-08!115;UBERON:0000468!6.31e-07!659 | |ontology_enrichment_uberon=UBERON:0007023!1.07e-08!115;UBERON:0000468!6.31e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;5.39e-08;1!UBERON:0002426;5.39e-08;1!UBERON:0003831;5.39e-08;1!UBERON:0003898;5.39e-08;1!UBERON:0004830;5.39e-08;1!UBERON:0005208;5.39e-08;1!UBERON:0003830;5.39e-08;1!UBERON:0005175;5.39e-08;1!UBERON:0001774;5.39e-08;1!UBERON:0004145;5.39e-08;1!UBERON:0005946;5.39e-08;1!UBERON:0001103;5.39e-08;1!UBERON:0005965;5.39e-08;1!UBERON:0002078;5.39e-08;1!UBERON:0001013;8.75e-08;14 | |ontology_enrichment_uberon_v019=UBERON:0002134;5.39e-08;1!UBERON:0002426;5.39e-08;1!UBERON:0003831;5.39e-08;1!UBERON:0003898;5.39e-08;1!UBERON:0004830;5.39e-08;1!UBERON:0005208;5.39e-08;1!UBERON:0003830;5.39e-08;1!UBERON:0005175;5.39e-08;1!UBERON:0001774;5.39e-08;1!UBERON:0004145;5.39e-08;1!UBERON:0005946;5.39e-08;1!UBERON:0001103;5.39e-08;1!UBERON:0005965;5.39e-08;1!UBERON:0002078;5.39e-08;1!UBERON:0001013;8.75e-08;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,3.34e-08,1;UBERON:0003831,3.34e-08,1;UBERON:0003898,3.34e-08,1;UBERON:0004830,3.34e-08,1;UBERON:0003830,3.34e-08,1;UBERON:0005175,3.34e-08,1;UBERON:0001774,3.34e-08,1;UBERON:0001103,3.34e-08,1;UBERON:0010084,3.34e-08,1;UBERON:0002134,5.05e-08,1;UBERON:0005208,5.05e-08,1;UBERON:0005946,5.05e-08,1;UBERON:0005965,5.05e-08,1;UBERON:0002078,5.05e-08,1;UBERON:0001013,1.17e-07,14 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,1.04474251279935,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80656306207871,0.32389366601898,2.83333124397605,0,0,0.242584061187816,0,0,0,1.7261543539329,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0,0,0,1.00499466102697,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0.324547393654683,0.522389211897802,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0.723280468230358,0,0.741800787835671,0,1.43723628363248,0,0.125118519871964,0.277064115484183,0,0,0.751190294532984,0,0,0,0,0,0.103052529238439,0.515281080091258,0,0,0,0,0.184099797284599,0.161646056818812,0,0,0.339121184620975,0,0,0,1.21973706129595,1.59035721985782,0.69716365721711,0.725627385107593,0.252320850875628,1.09493207722749,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,2.53510069643662,2.94848165003288,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.936017060556951,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.781952530212746,0.587403472388222,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0,1.24293207719189,0.246381468041427,0,0.232420756919918,0,0,0,0.34444334449382,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0.751941714077915,0.290033387828457,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27281299170375,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,1.97576935775941,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,1.60515529459758,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,1.43574604915363,0.399358000997982,0,0.223171457441873,0,0,0,0.236349546921671,0.164831716762333,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.630445658393585,0.262272940674991,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0.427149650270779,0.471612915298998,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,0.467426619694449,1.10961172300523,0.189403005275089,0.754703705257725,0,0,0.756154618816195,0,0,0,0,0.310525913752519,1.65882483136342,0,0,0,0,0,0,0,0,0.398095888698616,0,0,1.34699795506368,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0.398594520940089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0.496211178389294,0.175871244359621,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0.111231401892069,0.313972371402056,0,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.223710863595585,0,0,0,0.205325613712494,1.1598144313382,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0,0,0.469919589899268,0.386747327841463,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0.0679914901909147,0,0,0,1.38652688589425,0.865253124247578,0.126166424835079,0.874124575709564,0,1.32585478664576,0.534434810531121,1.74600309116205,0,0.682008283964155,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0.318235791390825,0.202117188958219,0,0,0.134704106029175,0.717222053926764,0.665320713092027,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,1.04474251279935,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80656306207871,0.32389366601898,2.83333124397605,0,0,0.242584061187816,0,0,0,1.7261543539329,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0,0,0,1.00499466102697,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0.324547393654683,0.522389211897802,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0.723280468230358,0,0.741800787835671,0,1.43723628363248,0,0.125118519871964,0.277064115484183,0,0,0.751190294532984,0,0,0,0,0,0.103052529238439,0.515281080091258,0,0,0,0,0.184099797284599,0.161646056818812,0,0,0.339121184620975,0,0,0,1.21973706129595,1.59035721985782,0.69716365721711,0.725627385107593,0.252320850875628,1.09493207722749,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,2.53510069643662,2.94848165003288,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.936017060556951,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.781952530212746,0.587403472388222,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0,1.24293207719189,0.246381468041427,0,0.232420756919918,0,0,0,0.34444334449382,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0.751941714077915,0.290033387828457,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27281299170375,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,1.97576935775941,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,1.60515529459758,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,1.43574604915363,0.399358000997982,0,0.223171457441873,0,0,0,0.236349546921671,0.164831716762333,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.630445658393585,0.262272940674991,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0.427149650270779,0.471612915298998,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,0.467426619694449,1.10961172300523,0.189403005275089,0.754703705257725,0,0,0.756154618816195,0,0,0,0,0.310525913752519,1.65882483136342,0,0,0,0,0,0,0,0,0.398095888698616,0,0,1.34699795506368,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0.398594520940089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0.496211178389294,0.175871244359621,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0.111231401892069,0.313972371402056,0,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.223710863595585,0,0,0,0.205325613712494,1.1598144313382,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0,0,0.469919589899268,0.386747327841463,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0.0679914901909147,0,0,0,1.38652688589425,0.865253124247578,0.126166424835079,0.874124575709564,0,1.32585478664576,0.534434810531121,1.74600309116205,0,0.682008283964155,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0.318235791390825,0.202117188958219,0,0,0.134704106029175,0.717222053926764,0.665320713092027,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p10@FAM20A | |short_description=p10@FAM20A | ||
}} | }} |
Latest revision as of 00:32, 17 September 2015
Short description: | p10@FAM20A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FAM20A_5end |
Coexpression cluster: | NA |
Association with transcript: | -446bp_to_ENST00000226094, NM_001243746, NM_017565, uc002jho.2, uc010wqp.1_5end |
EntrezGene: | FAM20A |
HGNC: | 23015 |
UniProt: | Q96MK3B7Z4Y3Q8IYA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 1.84e-10 | 3 |
perirenal preadipocyte | 3.83e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 3.34e-08 | 1 |
respiratory system muscle | 3.34e-08 | 1 |
skeletal muscle of trunk | 3.34e-08 | 1 |
respiratory system skeletal muscle | 3.34e-08 | 1 |
thoracic segment muscle | 3.34e-08 | 1 |
chest organ | 3.34e-08 | 1 |
muscle of trunk | 3.34e-08 | 1 |
diaphragm | 3.34e-08 | 1 |
future diaphragm | 3.34e-08 | 1 |
tricuspid valve | 5.05e-08 | 1 |
right atrium valve | 5.05e-08 | 1 |
outflow tract of atrium | 5.05e-08 | 1 |
outflow part of right atrium | 5.05e-08 | 1 |
right cardiac atrium | 5.05e-08 | 1 |
adipose tissue | 1.17e-07 | 14 |