FFCP PHASE1:Hg19::chr17:7082573..7082598,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=432 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=742 | |||
|TSSclassifier=strong | |||
|UniProt=P07306,F8W7M3,Q6FGQ5 | |||
|association_with_transcript=284bp_to_ENST00000269299,NM_001197216,NM_001671,uc002ges.3_5end | |||
|cluster_id=chr17:7082573..7082598,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_5_at_ASGR1_5end | |||
|id=chr17:7082573..7082598,- | |||
|ontology_enrichment_celltype=CL:0000181!2.39e-30!12;CL:0000417!2.39e-30!12;CL:0000668!2.39e-30!12;CL:0000414!2.39e-30!12;CL:0000412!2.39e-30!12;CL:0000182!2.39e-30!12;CL:0000223!1.03e-12!59;CL:0002563!6.65e-11!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.01e-54;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.57e-54,12;CL:0000223,5.43e-15,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.17e-41;11!UBERON:0009497;4.51e-35;13!UBERON:0001041;2.57e-15;30!UBERON:0003104;8.59e-15;31!CL:0000223;4.07e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.74e-33!19;UBERON:0006925!1.74e-33!19;UBERON:0008836!1.74e-33!19;UBERON:0008835!8.35e-29!22;UBERON:0003894!8.35e-29!22;UBERON:0009854!1.63e-27!23;UBERON:0007499!3.03e-25!25;UBERON:0009497!3.03e-25!25;UBERON:0000015!3.03e-25!25;UBERON:0002423!3.03e-25!25;UBERON:0006235!3.03e-25!25;UBERON:0004161!3.03e-25!25;UBERON:0005057!3.06e-24!26;UBERON:0009856!3.06e-24!26;UBERON:0003929!4.53e-21!54;UBERON:0002365!3.47e-20!31;UBERON:0002330!3.47e-20!31;UBERON:0002368!8.95e-18!35;UBERON:0005911!6.60e-16!82;UBERON:0005172!9.00e-14!55;UBERON:0005173!9.00e-14!55;UBERON:0000949!1.29e-13!45;UBERON:0004921!5.52e-13!129;UBERON:0004185!5.52e-13!129;UBERON:0002530!8.53e-13!59;UBERON:0002417!2.67e-12!61;UBERON:0000916!2.67e-12!61;UBERON:0001242!6.65e-11!4;UBERON:0001262!6.65e-11!4;UBERON:0004786!6.65e-11!4;UBERON:0004808!6.65e-11!4;UBERON:0001277!6.65e-11!4;UBERON:0001007!1.88e-10!155;UBERON:0001555!1.88e-10!155;UBERON:0007026!1.88e-10!155;UBERON:0004119!2.09e-09!169;UBERON:0000925!2.09e-09!169;UBERON:0006595!2.09e-09!169;UBERON:0003350!6.70e-09!5;UBERON:0005177!5.09e-08!107;UBERON:0000077!9.15e-08!130;UBERON:0009569!1.62e-07!113;UBERON:0000490!3.09e-07!138;UBERON:0001041!3.34e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.82e-60;19!UBERON:0006925;2.82e-60;19!UBERON:0002423;8.94e-46;25!UBERON:0002365;1.89e-35;31!UBERON:0002330;1.89e-35;31!UBERON:0002368;2.81e-31;33!UBERON:0000949;7.49e-23;43!UBERON:0005172;1.27e-13;52!UBERON:0005173;1.27e-13;52!UBERON:0002417;5.81e-12;58!UBERON:0000916;5.81e-12;58!UBERON:0002530;7.78e-12;57!UBERON:0001007;7.38e-11;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.82e-60,19;UBERON:0006925,2.82e-60,19;UBERON:0008836,2.82e-60,19;UBERON:0008835,4.87e-52,22;UBERON:0003894,4.87e-52,22;UBERON:0009854,9.05e-50,23;UBERON:0007499,8.95e-46,25;UBERON:0009497,8.95e-46,25;UBERON:0000015,8.95e-46,25;UBERON:0002423,8.95e-46,25;UBERON:0006235,8.95e-46,25;UBERON:0004161,8.95e-46,25;UBERON:0009856,5.24e-44,26;UBERON:0002365,7.08e-37,31;UBERON:0002330,7.08e-37,31;UBERON:0002368,1.24e-32,35;UBERON:0003929,1.57e-26,54;UBERON:0000949,2.55e-25,45;UBERON:0005172,4.81e-21,54;UBERON:0005173,4.81e-21,54;UBERON:0002530,3.13e-19,59;UBERON:0002417,6.65e-19,60;UBERON:0000916,6.65e-19,60;UBERON:0005911,2.58e-17,82;UBERON:0001041,6.62e-13,87;UBERON:0004921,9.32e-12,118;UBERON:0005177,4.75e-11,101;UBERON:0009569,6.50e-10,112;UBERON:0003914,1.82e-09,117;UBERON:0001007,1.82e-09,145;UBERON:0001555,1.82e-09,145;UBERON:0007026,1.82e-09,145;UBERON:0000490,2.50e-09,148;UBERON:0005256,4.67e-09,122;UBERON:0004119,1.61e-08,160;UBERON:0000925,1.61e-08,160;UBERON:0006595,1.61e-08,160;UBERON:0001048,9.12e-07,160;UBERON:0003104,9.12e-07,160;UBERON:0009142,9.12e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,13.7595810334868,13.5881678536723,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.709476419318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.83691564816031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8291805714265,18.5435681357625,20.6928879632348,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4828054983836,14.5757577803443,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@ASGR1 | |||
}} |
Latest revision as of 04:22, 17 September 2015
Short description: | p5@ASGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ASGR1_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 284bp_to_ENST00000269299, NM_001197216, NM_001671, uc002ges.3_5end |
EntrezGene: | ASGR1 |
HGNC: | 742 |
UniProt: | P07306F8W7M3Q6FGQ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.57e-54 | 12 |
endodermal cell | 5.43e-15 | 58 |