FFCP PHASE1:Hg19::chr3:186504957..186505008,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6043 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10106 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-79bp_to_NR_002586,uc010hyw.1_5end | |||
|cluster_id=chr3:186504957..186505008,+ | |||
|description=CAGE_peak_1_at_SNORA63_5end | |||
|id=chr3:186504957..186505008,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.66e-12!115;UBERON:0003080!1.50e-10!42;UBERON:0002780!1.65e-10!41;UBERON:0001890!1.65e-10!41;UBERON:0006240!1.65e-10!41;UBERON:0001049!2.05e-10!57;UBERON:0005068!2.05e-10!57;UBERON:0006241!2.05e-10!57;UBERON:0007135!2.05e-10!57;UBERON:0002619!2.28e-09!22;UBERON:0002020!3.11e-09!34;UBERON:0003528!3.11e-09!34;UBERON:0001950!2.68e-08!20;UBERON:0002791!5.28e-08!33;UBERON:0002616!7.42e-08!59;UBERON:0001869!7.57e-08!32;UBERON:0001893!8.18e-08!34;UBERON:0001017!1.05e-07!82;UBERON:0000956!2.36e-07!25;UBERON:0000203!2.36e-07!25;UBERON:0005743!8.15e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.78e-11;22!UBERON:0002780;4.95e-11;41!UBERON:0001890;4.95e-11;41!UBERON:0003528;1.59e-10;34!UBERON:0002020;1.59e-10;34!UBERON:0002791;2.18e-10;32!UBERON:0001950;6.73e-10;20!UBERON:0000956;1.75e-09;25!UBERON:0000203;1.75e-09;25!UBERON:0001869;2.58e-09;32!UBERON:0000073;4.40e-09;53!UBERON:0002616;4.40e-09;53!UBERON:0001893;1.43e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.10e-14,56;UBERON:0005068,6.10e-14,56;UBERON:0006241,6.10e-14,56;UBERON:0007135,6.10e-14,56;UBERON:0002780,8.27e-14,41;UBERON:0001890,8.27e-14,41;UBERON:0003080,8.27e-14,41;UBERON:0006240,8.27e-14,41;UBERON:0000073,3.05e-13,53;UBERON:0002616,3.05e-13,53;UBERON:0003528,1.36e-12,34;UBERON:0002020,1.36e-12,34;UBERON:0007023,2.22e-12,114;UBERON:0001017,1.15e-11,81;UBERON:0002619,3.06e-11,22;UBERON:0002791,3.60e-11,32;UBERON:0001893,4.03e-10,34;UBERON:0001869,4.11e-10,32;UBERON:0001016,6.97e-10,89;UBERON:0001950,1.58e-09,20;UBERON:0000955,1.63e-09,68;UBERON:0006238,1.63e-09,68;UBERON:0000956,2.74e-09,25;UBERON:0000203,2.74e-09,25;UBERON:0002346,1.53e-08,86;UBERON:0003075,7.83e-07,82;UBERON:0007284,7.83e-07,82 | |||
|phase1_expression=0.908391896352783,1.71280419112787,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,1.04474251279935,0,0,0,0.263766978228454,0.247532705920093,0.662794751455832,0.672325146451775,1.80808358407193,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0,0.229240217243854,0.246301768349837,0.314843125254717,0.393364276848904,0,0.464448369948228,0,0,0,0.46480320348181,0.568676929949686,0.880801318004542,1.10799081706375,1.40381113229099,1.51907609501096,0,0.32389366601898,0.515151135268373,0.436194716338694,0.377875943688809,0.485168122375632,0.464858073811369,0.411167888021826,1.23882548358041,0.575384784644301,0.768482119587302,0.709446689665756,0.344745680736619,0.645484683583826,0,0.941211697713023,0.272906150057846,0.674170453335254,0,0.641858054152187,0.639337125799041,0,0.598390972864896,0.852449501065388,1.7412554317715,0,0,0.502497330513487,0,0.434377689410233,0,0.368277635987565,0.949387162322653,0.633765858935825,1.27562579979026,0.628975936525128,0.112328631146495,0.450530678524519,0.48217676009124,0.570025487482497,1.59133341759272,0.182664153764634,1.75996244461323,0,0.889509253863555,0,0.400395987036012,0,1.98313461835459,0.954053754535364,1.70763890732835,0.587237189370939,0.382273228125229,0,3.92355994087075,0.526768169550154,1.180258620683,1.96505381374582,2.05601498999509,0.334372990781356,1.62961133316795,0.473447805734733,3.89653456815823,1.00269411196656,0.589211814949674,1.10766947291811,1.62482318259009,0.512365278902701,0.910415432919148,0.164437904603676,0.829050053357545,0.289803085735052,0.593146252648242,1.87278579662799,1.04535523804977,0.566546713487831,0.766440987203842,1.37450978193052,2.27717722817553,0,0,1.90090408889675,0.451725357233318,0.639933055772092,1.24930726552346,0.473554504088034,0,0.80642697289893,3.7441627409691,0.868946423296794,7.31420598941885,0,0,0.722878304769133,0,0.579386075843295,0,0.973269740605272,0.850813354476611,0.665188192387692,0.527008714158756,0.392937226493138,0,0,0.649094787309367,0.174129737299267,0.664789802594326,0.238490624305342,0,0.371457501329565,0,0,0.694281003215189,0,0,0,0.417989933073621,0.775250277507987,0,0,0,0,0.24406205754817,0,0,0.357198913136319,0.44905874525234,0.450445921933289,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0.622422070799533,0.538842688278752,0,0,0.576175924479999,0.234321431833797,0,0,0.448346041655403,0.352303495931295,0.323745888736263,0,1.02077085627447,0.368502951935304,0.619954687054593,0,0,0,0,0.336672227908132,0.375355559615893,0,0,0.30648779579902,0.300476117813194,0.340296549480063,1.25572744982203,0,0.423863802319124,0.300091096084402,0.206105058476878,0.515281080091258,0.37223371266318,0.337552664482532,0.487185025805993,0.252433774244115,0.552299391853796,1.77810662500693,0.355009592516614,0.302256294682921,0.67824236924195,0.193260853163297,0.272746120590835,0.573609190778008,1.46368447355514,0.927708378250397,1.2781333715647,0.829288440122964,0.504641701751257,0.36497735907583,0,0,0,2.3218396401599,0,0.354920400119532,0.168584690078102,0,0,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,2.53510069643662,0.982827216677626,1.18157981336281,0,0.614942192715568,0,0,0,0.603173834469785,0.648119116109707,0,0,0,0.579652024875384,0.821860859650752,0.288732895522148,0.462985512576611,0.761016608938393,0.790204397959275,0,0.246217006087397,0.234004265139238,0.891786973732369,0,0,0.283550194484773,0.358234090811393,1.16253575405585,0,0.492663237895943,0.176096868026452,0.829312462163088,0.576479813667846,0.37872730027914,0.190493682876507,0,0,0,0.308482478109971,0.300343057843917,0.571652865261156,0,0,0.1466765716419,0.387815147273333,0,0,0,0,0,0,0,0.57191197463259,0,0,0.65147236858747,0.355391948742546,0,0,0,0.799783929456456,0,2.00902836572851,0,0.479249710983165,0,0,0.579125226670317,0.821905290201534,0,0.448340575974109,0.985153801009636,1.2937654491571,1.28343036279748,0,0,0.773288812777695,0.167516265334349,1.91381625495949,0,2.99161459204025,0.414415513436035,0.736148950314839,1.00034104211935,0.813795071099207,0.831883446123229,1.24900292158013,1.73472656537328,1.40569697991256,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0.206768026122887,1.50999940573032,1.17400313583789,0,0,0,0.992431231275107,0.153461973288062,0.561320188866147,0.896974044789907,0.511707249066704,0.64341568457443,0,0.308419387605311,0.532685175939381,0.328508624055237,1.55776328755086,0,0.604297247958111,1.00253235151642,1.01289087829486,0.68888668898764,0.546273504020151,0.917870904715969,0,0.308061348417659,0.784349769176855,0,0.527758144464379,0,0,1.29549549661284,0,0,0,0,0,0,0.219259876645935,0,0,0,0.650756789328606,0.618246069886334,0.27470839445503,0.41254749960294,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.275673144969061,0.859361958946189,0.435050081742686,0.511359764496605,0,0.165284915360978,0.576570202095319,1.27612712494584,1.8208400553999,0.464845549297286,0.31481234683064,0.6970372701606,0.616067160352178,0,0,0.37064843820784,0.286249773483982,0,0.632758849437452,0,0,2.56763392820352,0,0,0.539617372749944,0,0.353437207037059,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,1.31178950409327,0.405820753925408,0.6196469961995,0.563391205064483,0,0.0982490410131212,0,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0.384888450902048,0,0,0.659006605437454,0,0,0,0.459446800413919,0,0,0,0.714695326373367,0.411362273086194,0,0.540031437238115,0.79312517629427,0.854592569019785,0,0.980160863924127,1.85803175125719,0.577076851905779,0.640276590135727,0.956557636372934,0.997896857164083,0.383010740264733,0.846694330895531,0.973865820823666,1.40398589056729,0.684704037099577,0.313359791546046,0,1.01575066680962,1.76646882614069,0.403599414382095,1.27753871307098,0.343505344755765,0,0.447352215784832,0,0.781552381608161,0.278406173895242,1.23087398947712,0.270455678475983,0.66614393599564,0,0.561421621224659,0.586032717087576,2.18448939149124,0.334330152832435,0,1.90995587790152,1.18785872333055,2.45728561679386,0.994147647766298,1.82870241333667,0.222617410045812,0.988823245360557,0.63337622438398,2.59022384726391,0,1.25966373927138,0.511343412510774,0.861593638227486,0.622079175323615,0.269605053441981,0.895105873378046,0,1.28236427328014,0,0,0.969332746095218,3.33965153382665,0,1.30213880542617,0.524759999977174,0.724999575434793,1.82069517256799,1.27126825146383,0.945550727071745,0.344743373241465,2.91604613383254,0.520874984799877,0,2.89431452700979,0,0.995213339381022,2.36438095162838,1.97446857438575,0.435753854075961,0,0.692552326534174,0.341826167541004,0.922255617552241,0.538545866458633,0.977826347298073,1.5950057986596,0.366390373607449,2.13213910407454,1.02193298195737,0.941881538370149,0.166211681900156,0.451191321234361,0,0.167821586975843,0.569261198172555,0,1.05499032264014,2.28525931422807,0.141353071433941,0.432777279484182,3.98104772431402,0.707660516026713,1.22206028986725,0.889563386041866,0.494255755786011,0.626531697032732,0.337005664903385,1.60515529459758,3.04543779442941,1.45963831372533,0.586993856796269,0.485560759068186,0.789168805698781,1.20990716048664,0.61214552326098,0.189559738885464,0.450970258243478,0.414752765588989,0,1.323967823502,0,0,0.569219092059585,0.416024019039416,1.56203764501618,0.587954384486266,0,1.57254001417827,0.343972064943233,0.19351266257817,0.803982487948041,0.492692742319255,1.06687918137261,0.264768380074501,1.80784592624426,1.09633539717401,0.596143835108969,0.569797163602908,0.977756913674015,0.240476460754601,1.28071796843612,1.19885765749278,0.864542502924636,0.229073192331831,2.9171149636534,0.288109595976299,0.869767748958028,0.471388069233591,0,0.209205692624666,0.713987523454252,0.288950589901519,1.20084057741958,1.09524303113594,0,0.859530882839914,1.8402114799552,1.11712960508902,0.916641696046735,0.717873024576814,2.1964690054889,1.71690419254628,1.11585728720936,0.604651252380536,0.720599767084807,0,0.551482276150566,0.659326867049332,0.471824806979294,0.295282444544246,0.508039992394707,4.77137813885582,1.77064427945048,1.92903778158023,2.75078873194468,4.98528405635022,0,0.77380195455795,1.09349201984444,0.670869375198532,0.157611414598396,0.314727528809989,0.528001682597033,0.35857467866569,0.767660789277781,0,3.31045985182716,0,1.62899880526114,1.72844298240254,1.30634944043764,0,0.082092520749339,0.511164065356265,0.453248366080503,0.293104467356165,2.65013777824443,1.80996138906171,1.85125642439766,0.171086837884329,1.40963004463334,0.533937062838473,0.157204305099666,1.24271716604159,0,0.790446527591777,0.365377795142688,1.91502377331055,0,0,0.306345576763462,0.327872630709804,0,7.08854543973589,5.00307686098049,3.8809188519015,0.573409195690071,1.10929051536852,0.310482014706917,1.66018361923477,0.124980407962107,0,0.285465333544967,3.2937214757744,0.936669811613763,0.434763085832475,0.149254802886874,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0.457680136793847,0.151230923763239,0.777186002913902,0.147855149989634,0.63718706865481,0.449803112163605,0.155262956876259,0,1.06336685823198,0.521745061811734,0.450772826991655,0.761610424337591,0.406870733204662,0.181848659202559,0.214821114084977,0.928067519756987,1.19428766609585,2.00013882331577,1.37358282073117,1.01024846629776,0,0.963099152036517,0.428883182749851,1.30497145982606,1.58694147858591,0.463044948647668,2.20263034055821,1.07453304648892,0.617602894321944,0.657852148736121,0.353378291891762,1.3503982678964,0.844712203265363,0.256241518587947,0.690860683462397,1.51929978088691,3.31820246764154,0.584580926518165,0.132864840313363,0,2.6208787907713,1.2288645437686,1.26787274015176,0.59996218756479,0.960225567247268,0.516644938982447,0.567515953566836,0.368211900503681,0.419638523158333,0.622077260032973,0.255788742607303,0.215649622793364,0.943595651135378,1.20130602011215,1.86705782949428,2.33832412111851,1.11542187833102,0,0.954013051960256,0.315446980005013,0,0.705351887381368,0.6124909547064,0.642292250964595,1.41696576325585,1.27707087245721,1.23069818544453,1.76450187355203,0.553258019713743,3.71393984953257,0,0.294443155503077,0.471878893390961,1.65085738669511,1.27078232765372,0.381382095467167,0.690359926060101,0,0.676892955143315,1.41193548092464,1.56302802246618,0.261906694481422,1.96526301012116,0.443568258651136,0.472763092328763,7.02970288752463,3.51367554052013,1.07806877329642,2.7348740450911,0.548257766857182,2.97726707033577,2.11045493231545,1.66091155931474,2.14280734351315,1.3451348888753,5.46269043812968,2.27662191351298,0.532214220975833,0.806637912890455,0.685952037749674,1.01954599465248,0.920818829879887,0.118193840883968,0.667388411352415,0.706437835654626,2.19961825882403,0.840816489941367,0.913158720509496,0.863710364874486,3.8220135030964,0.357382720883282,0,0.23248285073625,0.869291361512897,0.801711364730253,1.03608082081518,1.19502933965765,1.38251932362818,1.29068207646083,0.236664001461131,0.426067023795788,3.38709640152743,1.60374807980835,0,0,0.559277158988962,0.883352102537187,0.487671699929078,3.23714418593947,1.95059333026869,1.1598144313382,0.971421986118279,0.701818390386317,1.19370465096821,0.83244063544298,0.45178432815584,2.52863188514487,0.603851374266694,0.308696632431779,2.62271472604749,5.64380755633827,0.980593287015622,1.17838273550813,1.37415926980462,0.891139200981258,1.6906229103336,0.509781344063451,0.469919589899268,0,0.299823467774787,0.892769693028288,2.11736923029415,0.561689566824178,0.730336388246517,1.83491713361816,1.29005624836306,0.473314686579554,1.15585533324555,0.436350690340377,1.5870805215462,1.48798007266701,0.462175628631418,1.73050624849516,1.64016352285603,1.85751472338282,0.380095503034311,0.305966489225945,2.13773924212448,1.56221329209236,2.005660314339,0.682008283964155,1.07185652062471,0.829169439458779,1.13776295448085,1.0661699095049,2.3806443146374,0.258355639344024,0.124149428591716,1.23345048838675,1.01835453245064,1.41482032270754,0.653150243690884,2.39563310759697,0.202056159043763,0.430333232356058,1.33064142618405,0.162806537221949,1.28072815053259,1.9307228228694,0.538951212639521,0,0.366724332548599,4.47585796147312,0,0.805095174364105,0.961705476909699 | |||
|short_description=p1@SNORA63 | |||
}} |
Latest revision as of 05:32, 17 September 2015
Short description: | p1@SNORA63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORA63_5end |
Coexpression cluster: | NA |
Association with transcript: | -79bp_to_NR_002586, uc010hyw.1_5end |
EntrezGene: | SNORA63 |
HGNC: | 10106 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 6.10e-14 | 56 |
neural rod | 6.10e-14 | 56 |
future spinal cord | 6.10e-14 | 56 |
neural keel | 6.10e-14 | 56 |
regional part of forebrain | 8.27e-14 | 41 |
forebrain | 8.27e-14 | 41 |
anterior neural tube | 8.27e-14 | 41 |
future forebrain | 8.27e-14 | 41 |
regional part of nervous system | 3.05e-13 | 53 |
regional part of brain | 3.05e-13 | 53 |
brain grey matter | 1.36e-12 | 34 |
gray matter | 1.36e-12 | 34 |
adult organism | 2.22e-12 | 114 |
central nervous system | 1.15e-11 | 81 |
regional part of cerebral cortex | 3.06e-11 | 22 |
regional part of telencephalon | 3.60e-11 | 32 |
telencephalon | 4.03e-10 | 34 |
cerebral hemisphere | 4.11e-10 | 32 |
nervous system | 6.97e-10 | 89 |
neocortex | 1.58e-09 | 20 |
brain | 1.63e-09 | 68 |
future brain | 1.63e-09 | 68 |
cerebral cortex | 2.74e-09 | 25 |
pallium | 2.74e-09 | 25 |
neurectoderm | 1.53e-08 | 86 |
neural plate | 7.83e-07 | 82 |
presumptive neural plate | 7.83e-07 | 82 |