FFCP PHASE1:Hg19::chr15:34635314..34635368,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55505 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14378 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NPE3 | |||
|association_with_transcript=0bp_to_ENST00000557912,NM_018648,uc001zie.1_5end | |||
|cluster_id=chr15:34635314..34635368,- | |||
|description=CAGE_peak_1_at_NOP10_5end | |||
|id=chr15:34635314..34635368,- | |||
|ontology_enrichment_celltype=CL:0000548!7.58e-29!679;CL:0000004!7.58e-29!679;CL:0000255!7.58e-29!679;CL:0000012!6.11e-28!682;CL:0000144!1.94e-18!625;CL:0000003!1.23e-17!722;CL:0002371!8.11e-17!591;CL:0000063!2.61e-13!578;CL:0002321!2.82e-10!248;CL:0000220!4.20e-10!246;CL:0000222!1.01e-09!119;CL:0000066!1.10e-09!254;CL:0000183!1.76e-07!59;CL:1000449!2.10e-07!16;CL:0002681!3.98e-07!13;CL:0002584!3.98e-07!13;CL:0000723!9.89e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.73e-07;15!CL:0002681;6.87e-07;12!CL:0002584;6.87e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.42e-11,250;CL:0000222,2.50e-10,121;CL:0000066,1.70e-09,253;CL:1000449,3.76e-07,15;CL:0002681,6.89e-07,12;CL:0002584,6.89e-07,12;CL:0000393,7.13e-07,61;CL:0000211,7.13e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.95e-09!448;UBERON:0004120!2.95e-09!448;UBERON:0006603!2.95e-09!448;UBERON:0005256!1.47e-08!143;UBERON:0000353!1.02e-07!17;UBERON:0004211!2.10e-07!16;UBERON:0001285!2.10e-07!16;UBERON:0007684!2.10e-07!16;UBERON:0003220!2.10e-07!16;UBERON:0004208!2.10e-07!16;UBERON:0001225!3.98e-07!13;UBERON:0008987!3.98e-07!13;UBERON:0001851!5.11e-07!16;UBERON:0000914!6.09e-07!83;UBERON:0002329!6.09e-07!83;UBERON:0003077!6.09e-07!83;UBERON:0003059!6.09e-07!83;UBERON:0007282!6.09e-07!83;UBERON:0009618!6.09e-07!83;UBERON:0007285!6.09e-07!83;UBERON:0004290!6.47e-07!70;UBERON:0000486!7.22e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;2.90e-07;15!UBERON:0006555;3.73e-07;15!UBERON:0004819;3.73e-07;15!UBERON:0001285;3.73e-07;15!UBERON:0007684;3.73e-07;15!UBERON:0001225;6.87e-07;12!UBERON:0008987;6.87e-07;12!UBERON:0001851;9.19e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,9.66e-10,78;UBERON:0000926,1.18e-07,315;UBERON:0004120,1.18e-07,315;UBERON:0006603,1.18e-07,315;UBERON:0000353,2.89e-07,15;UBERON:0004211,3.76e-07,15;UBERON:0009773,3.76e-07,15;UBERON:0001231,3.76e-07,15;UBERON:0001285,3.76e-07,15;UBERON:0007684,3.76e-07,15;UBERON:0004208,3.76e-07,15;UBERON:0002329,3.91e-07,71;UBERON:0003059,3.91e-07,71;UBERON:0007282,3.91e-07,71;UBERON:0004290,3.91e-07,71;UBERON:0009618,3.91e-07,71;UBERON:0000486,4.45e-07,83;UBERON:0007524,6.68e-07,73;UBERON:0001225,6.89e-07,12;UBERON:0008987,6.89e-07,12;UBERON:0005256,7.99e-07,122;UBERON:0001851,9.21e-07,15 | |||
|phase1_expression=160.240330516631,207.677508174254,133.906683891173,254.186177816951,240.912029896308,317.531222772534,400.213807505931,239.421832028769,160.629161342901,255.563293961569,660.119904901916,159.680643027156,259.019172620341,121.786091312686,208.448949332859,311.958867953624,265.18559233055,294.314966426111,255.676786566226,151.438901434449,310.285051382509,263.301966041594,110.487091032588,156.036844583088,165.46519898595,200.890843711364,216.991857916207,236.368476284979,71.9856626633494,45.2918689754711,62.7005299430108,319.958586118667,219.880320708123,157.884962341218,66.2344564961579,101.935339693481,91.3097366331375,49.3055913593371,58.1578897663411,87.6723917692041,249.441838303276,163.566301339585,147.848375822023,203.993729007729,227.859194044352,202.800275153014,219.645439875872,247.111900701117,259.533938810097,217.495448595546,211.588743593037,149.693251519474,202.365714592395,178.153772669136,207.202524489343,200.478091612874,266.0834963064,217.532332942842,220.074318614679,182.929545433373,198.194508997703,178.119702100827,172.735527500333,173.047248716274,216.786301255552,242.840876167808,193.697719437624,191.953980256152,192.948679815475,151.380624759466,167.09026272681,158.359383474653,193.991443501262,174.07435592104,108.640797282137,190.579708767114,140.523117564265,106.325240131786,115.240245661806,267.911979116774,114.774922743875,172.25229700005,117.917483789086,95.0281183596109,98.7355271788546,108.816206754459,78.4776134590584,82.1895989134911,97.1735962993747,96.3594292080718,45.5370375287559,34.6469941728854,34.0223173031454,104.41534957743,62.776959053932,95.3450386885779,34.6209195400346,35.763979410174,46.8771417718881,122.882074112148,61.9252306603822,71.01717086021,58.4480185223734,127.007920849098,73.3568709612345,75.5430580530148,72.8462393527892,176.637929901706,191.96759699838,185.814832202154,213.618563748461,117.370249722696,49.6759986592902,41.2012875258158,73.1748666634838,101.751789742414,87.75749303484,76.6289203426265,58.9535882405442,66.2616061794121,76.8278475550574,93.1443003559407,49.689789295665,59.2578009644957,57.4681342140791,58.0104267507841,82.1127996921047,27.0153035921141,23.5347372289486,32.7303152775126,192.60742438803,272.97524989938,115.076305659177,211.441904144971,146.39066990568,164.111105982613,105.773030957796,172.268744087133,103.799229246147,204.656233857947,178.12894538566,54.8147430957927,224.405897588206,377.458562754549,114.565229960103,117.363442939706,337.713219717917,65.3464310596637,94.9511551895012,78.0060752792086,112.499522569555,270.973897458429,154.477523215379,155.459684029103,408.592450868448,223.670968097275,202.725117540706,135.151965045559,135.902712346323,101.75506628046,154.686457769912,204.51319643828,187.439660196994,184.934529413972,315.145217726004,103.855583994385,179.174439355684,181.642318019599,265.237782815978,124.353801403425,178.255296844286,193.717213631013,314.102013960144,230.693753583401,311.104441761269,142.712586645981,66.8666363106755,76.0117044984356,207.126335203841,255.10830806475,134.503734619428,288.847699196494,77.180336779142,205.703196250414,273.471763908816,132.437749189315,237.38448088576,196.830002740389,370.53401119759,199.094665719013,317.428997492025,274.561857829122,275.184005425824,314.18845459293,124.942352807995,270.604001037825,148.169170206048,83.1602000097437,141.931217405892,110.129524794501,474.287973598717,172.881189030826,214.828498620162,88.6605169549385,221.683698544823,220.977700771093,156.548057380674,205.652548069118,61.8894243126574,110.195612630381,136.908008149077,89.4271466331519,107.792945583407,69.5629458123199,116.136918350912,45.5696097051419,112.442303956023,88.3518209854401,111.840626850394,88.5820391367089,78.8121295386884,132.388257071119,172.782243564387,146.491726697779,128.736168918874,126.480826566551,202.232404762869,204.228372983409,217.398867108869,158.912397338563,204.632210060135,228.47582678147,211.206868645252,144.729211093399,180.95674697175,219.646029959126,284.420515777817,293.282557298773,270.072673505119,264.38909978218,311.580472969013,274.745979000524,296.825544507982,347.325449820584,333.380269247963,328.958819189164,406.723655498181,426.334992362475,188.08932317845,348.410645983734,188.865001884528,171.011935701907,141.198787696856,133.763319122639,79.5735197373945,172.768784970615,202.269776008097,148.370314300058,283.190115283564,140.827025086124,168.768702150748,559.484914480413,331.962086658129,111.988771205924,127.388433245867,183.634121552086,212.973335785241,226.973203615876,96.4049365510316,145.084161394033,287.335246103993,195.393561391263,282.84510183545,264.329411842711,170.501860121842,220.885601503638,158.78726075215,174.380363108377,160.253959891058,64.0462209264727,85.0547872567764,34.8311234108497,29.832830357311,24.4910320847177,134.425042216522,138.661798477655,107.840051433243,196.733312926111,254.600871933429,180.506177764194,196.076932784577,161.020237119938,265.935641988301,185.692539698645,129.013172326262,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| |||
|short_description=p1@NOP10 | |||
}} |
Latest revision as of 06:50, 17 September 2015
Short description: | p1@NOP10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOP10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000557912, NM_018648, uc001zie.1_5end |
EntrezGene: | NOP10 |
HGNC: | 14378 |
UniProt: | Q9NPE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.42e-11 | 250 |
mesodermal cell | 2.50e-10 | 121 |
epithelial cell | 1.70e-09 | 253 |
epithelial cell of nephron | 3.76e-07 | 15 |
kidney cortical cell | 6.89e-07 | 12 |
renal cortical epithelial cell | 6.89e-07 | 12 |
electrically responsive cell | 7.13e-07 | 61 |
electrically active cell | 7.13e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 9.66e-10 | 78 |
mesoderm | 1.18e-07 | 315 |
mesoderm-derived structure | 1.18e-07 | 315 |
presumptive mesoderm | 1.18e-07 | 315 |
parenchyma | 2.89e-07 | 15 |
nephron epithelium | 3.76e-07 | 15 |
renal tubule | 3.76e-07 | 15 |
nephron tubule | 3.76e-07 | 15 |
nephron | 3.76e-07 | 15 |
uriniferous tubule | 3.76e-07 | 15 |
nephrogenic mesenchyme | 3.76e-07 | 15 |
somite | 3.91e-07 | 71 |
presomitic mesoderm | 3.91e-07 | 71 |
presumptive segmental plate | 3.91e-07 | 71 |
dermomyotome | 3.91e-07 | 71 |
trunk paraxial mesoderm | 3.91e-07 | 71 |
multilaminar epithelium | 4.45e-07 | 83 |
dense mesenchyme tissue | 6.68e-07 | 73 |
cortex of kidney | 6.89e-07 | 12 |
renal parenchyma | 6.89e-07 | 12 |
trunk mesenchyme | 7.99e-07 | 122 |
cortex | 9.21e-07 | 15 |