FFCP PHASE1:Hg19::chr1:153652578..153652638,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:153652578..153652638,+
|short_description=p5@NPR1
|description=CAGE_peak_5_at_NPR1_5end
|association_with_transcript=0bp_to_uc010pdz.1_5end
|EntrezGene=48...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4881 | |EntrezGene=4881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7943 | |HGNC=7943 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010pdz.1_5end | |||
|cluster_id=chr1:153652578..153652638,+ | |||
|description=CAGE_peak_5_at_NPR1_5end | |||
|id=chr1:153652578..153652638,+ | |||
|ontology_enrichment_celltype=CL:0000136!4.47e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000990;2.15e-15;8!CL:0000451;1.85e-12;10!CL:0002618;2.93e-11;3!CL:0000650;3.55e-08;2!CL:1000500;3.55e-08;2!CL:1000618;3.55e-08;2!CL:1001318;3.55e-08;2!CL:0002173;3.55e-08;2!CL:0000453;7.38e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,2.08e-15,8;CL:0000451,1.81e-12,10;CL:0002618,3.99e-11,3;CL:0000650,5.21e-08,2;CL:1000500,5.21e-08,2;CL:1000618,5.21e-08,2;CL:1001318,5.21e-08,2;CL:0002173,5.21e-08,2;CL:0000453,7.48e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.35e-09;4!UBERON:0007284;8.35e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.15e-15!115;UBERON:0003103!7.86e-11!69;UBERON:0000948!5.94e-08!24;UBERON:0005498!5.94e-08!24;UBERON:0004140!5.94e-08!24;UBERON:0009881!5.94e-08!24;UBERON:0004141!5.94e-08!24;UBERON:0003084!5.94e-08!24;UBERON:0007005!5.94e-08!24;UBERON:0004139!5.94e-08!24;UBERON:0004291!5.94e-08!24;UBERON:0007100!1.03e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.35e-11;3!UBERON:0000946;1.35e-11;3!UBERON:0003127;3.55e-08;2!UBERON:0002081;3.55e-08;2!UBERON:0002133;3.55e-08;2!UBERON:0003567;3.55e-08;2!UBERON:0003838;3.55e-08;2!UBERON:0003586;3.55e-08;2!UBERON:0005169;3.55e-08;2!UBERON:0002321;3.55e-08;2!UBERON:0005215;3.55e-08;2!UBERON:0002303;3.55e-08;2!UBERON:0002319;3.55e-08;2!UBERON:0000948;3.97e-07;22!UBERON:0002066;6.33e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.05e-11,3;UBERON:0009751,1.05e-11,3;UBERON:0000946,1.05e-11,3;UBERON:0002523,1.05e-11,3;UBERON:0005983,1.05e-11,3;UBERON:0002165,1.05e-11,3;UBERON:0002062,1.05e-11,3;UBERON:0007280,1.05e-11,3;UBERON:0002133,3.76e-08,2;UBERON:0002081,4.04e-08,2;UBERON:0010227,4.04e-08,2;UBERON:0003567,5.21e-08,2;UBERON:0003838,5.21e-08,2;UBERON:0003586,5.21e-08,2;UBERON:0005169,5.21e-08,2;UBERON:0002321,5.21e-08,2;UBERON:0005215,5.21e-08,2;UBERON:0002303,5.21e-08,2;UBERON:0002319,5.21e-08,2;UBERON:0003127,5.59e-08,2;UBERON:0003103,3.19e-07,68;UBERON:0005103,3.33e-07,8;UBERON:0000083,3.33e-07,8;UBERON:0009201,3.33e-07,8;UBERON:0006553,3.33e-07,8;UBERON:0003074,3.33e-07,8;UBERON:0003060,3.33e-07,8;UBERON:0002066,7.58e-07,5 | |||
|phase1_expression=0.726713517082227,0.642301571672949,3.38290569830331,0,0.893922188854576,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246301768349837,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.2786256184353,0,0,0,0,0,0,0,0,0.458426764241994,0,0,6.49094787309367,3.48259474598534,2.39324328933957,0,0,0,0,0,0,0.56530794192401,0,0,0,1.03366703667732,0,0,0,0,0,0,0,1.16089646769304,2.91888184414021,1.12611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0.269421344139376,1.79808093424805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.487894824518382,0.265059536642971,0.580969714347592,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42893272774789,0,2.057870056657,2.94017422771084,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0.234004265139238,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.797814349754612,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,3.45975702990393,0.511707249066704,0.64341568457443,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0.340187410553031,0.215915916102139,1.54227252690289,1.35473218771926,2.00675909541941,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.140669416410513,0,0,0,8.16916751829386,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0.123563938946503,0,0,4.01288823649394,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0.0730893170861856,0.0821154570532092,0.581934098930517,21.1814704059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,2.97908551215189,1.43574604915363,0,0,0.446342914883745,0.470284307407084,0,0,0,0,0,0,0,0,0,2.25054407851027,1.78801267576404,2.9080823662043,0,0,0,0,0.709251365692784,7.02891481008975,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.961086713109252,2.20086027139532,2.89967338743037,0.992332043623902,0,0,0,0.544017803369474,0,0.919036730290385,0.983617892129413,0,0.886068179966986,0.122026264901963,0,0.573409195690071,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,2.88929745610955,0,0.260994291965212,0,0,0,0,7.10243328470236,0,0,0,0,0,0,0,0,28.4496050905507,11.1606465863225,6.05191958746624,0,0,0,0,0,0,0,0,0,0,0,1.72519698234691,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,2.03067886542995,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.532214220975833,0,0,0,0,0,0,0.549451649953598,0,0,0.913158720509496,0,0,0.214429632529969,0,1.3948971044175,0,0,0,0,0,0,0,0,0,1.8328549483524,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0.109940516745429,0,0.154348316215889,1.09279780251979,0,0.735444965261716,0,0.981542335574726,0.297046400327086,0.4226557275834,0,0.187967835959707,0.773494655682926,0,0,0,0,0.730336388246517,0,0,0,0,0,1.5870805215462,0,0,0,0.504665699340316,0.218531143927391,0,0.509944148709909,0,0,0,0.606229585745915,0,0,0,0.426467963801962,1.66645102024618,0.0645889098360061,0.31037357147929,0,0.12729431655633,1.0105859447911,0.653150243690884,0.684466602170562,0.202056159043763,1.00411087549747,2.32862249582209,0,0.213454691755431,0,0,0,1.34465588601153,2.03448089157869,1.33151354837103,0.402547587182052,0 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| ||
|short_description=p5@NPR1 | |||
}} | }} |
Latest revision as of 07:10, 17 September 2015
Short description: | p5@NPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NPR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010pdz.1_5end |
EntrezGene: | NPR1 |
HGNC: | 7943 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 2.08e-15 | 8 |
dendritic cell | 1.81e-12 | 10 |
endothelial cell of umbilical vein | 3.99e-11 | 3 |
mesangial cell | 5.21e-08 | 2 |
kidney interstitial cell | 5.21e-08 | 2 |
juxtaglomerular complex cell | 5.21e-08 | 2 |
renal interstitial pericyte | 5.21e-08 | 2 |
extraglomerular mesangial cell | 5.21e-08 | 2 |
Langerhans cell | 7.48e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
valve | 1.05e-11 | 3 |
cardiac mesenchyme | 1.05e-11 | 3 |
cardial valve | 1.05e-11 | 3 |
tunica intima | 1.05e-11 | 3 |
heart layer | 1.05e-11 | 3 |
endocardium | 1.05e-11 | 3 |
endocardial cushion | 1.05e-11 | 3 |
presumptive endocardium | 1.05e-11 | 3 |
atrioventricular valve | 3.76e-08 | 2 |
cardiac atrium | 4.04e-08 | 2 |
future cardiac atrium | 4.04e-08 | 2 |
abdomen connective tissue | 5.21e-08 | 2 |
abdominal segment connective tissue | 5.21e-08 | 2 |
trunk connective tissue | 5.21e-08 | 2 |
interstitial tissue | 5.21e-08 | 2 |
extraglomerular mesangium | 5.21e-08 | 2 |
kidney interstitium | 5.21e-08 | 2 |
juxtaglomerular apparatus | 5.21e-08 | 2 |
mesangium | 5.21e-08 | 2 |
open tracheal system trachea | 5.59e-08 | 2 |
compound organ | 3.19e-07 | 68 |
mesonephric epithelium | 3.33e-07 | 8 |
mesonephric tubule | 3.33e-07 | 8 |
nephric duct | 3.33e-07 | 8 |
renal duct | 3.33e-07 | 8 |
mesonephric duct | 3.33e-07 | 8 |
pronephric duct | 3.33e-07 | 8 |
umbilical vein | 7.58e-07 | 5 |