FFCP PHASE1:Hg19::chr2:42795651..42795676,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57504 | |EntrezGene=57504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23784 | |HGNC=23784 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8M8,Q9BTC8 | |UniProt=F8W8M8,Q9BTC8 | ||
|association_with_transcript=0bp_to_ENST00000282366,ENST00000407270,NM_020744,uc002rsq.2,uc002rsr.2_5end | |association_with_transcript=0bp_to_ENST00000282366,ENST00000407270,NM_020744,uc002rsq.2,uc002rsr.2_5end | ||
|cluster_id=chr2:42795651..42795676,+ | |||
|description=CAGE_peak_3_at_MTA3_5end | |description=CAGE_peak_3_at_MTA3_5end | ||
|id=chr2:42795651..42795676,+ | |id=chr2:42795651..42795676,+ | ||
|ontology_enrichment_celltype=CL:0002321!9.55e-09!248;CL:0000066!1.07e-08!254;CL:0000220!3.10e-08!246 | |ontology_enrichment_celltype=CL:0002321!9.55e-09!248;CL:0000066!1.07e-08!254;CL:0000220!3.10e-08!246 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.12e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!8.34e-08!143 | |ontology_enrichment_disease=DOID:0050687!8.34e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.13e-20!347;UBERON:0000477!1.37e-16!286;UBERON:0000475!1.53e-16!365;UBERON:0000468!6.25e-16!659;UBERON:0004111!1.64e-14!241;UBERON:0000483!1.07e-13!309;UBERON:0000119!2.14e-13!312;UBERON:0000025!1.90e-12!194;UBERON:0000922!4.48e-12!612;UBERON:0003104!2.02e-11!238;UBERON:0009142!2.02e-11!238;UBERON:0000467!1.31e-10!625;UBERON:0000480!2.00e-10!626;UBERON:0002050!3.42e-10!605;UBERON:0005423!3.42e-10!605;UBERON:0000923!6.61e-10!604;UBERON:0005291!6.61e-10!604;UBERON:0006598!6.61e-10!604;UBERON:0002532!6.61e-10!604;UBERON:0002100!2.06e-09!216;UBERON:0001048!4.41e-08!168;UBERON:0001007!1.35e-07!155;UBERON:0001555!1.35e-07!155;UBERON:0007026!1.35e-07!155;UBERON:0004119!1.42e-07!169;UBERON:0000925!1.42e-07!169;UBERON:0006595!1.42e-07!169;UBERON:0000073!1.61e-07!94;UBERON:0001016!1.61e-07!94;UBERON:0003914!1.66e-07!118;UBERON:0000466!2.54e-07!126;UBERON:0005256!4.01e-07!143;UBERON:0005177!5.71e-07!107;UBERON:0000077!6.93e-07!130;UBERON:0005743!7.41e-07!86;UBERON:0000924!7.98e-07!173;UBERON:0006601!7.98e-07!173;UBERON:0000033!9.36e-07!123 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,4.57e-13,240;UBERON:0000483,6.16e-12,306;UBERON:0011216,8.79e-12,223;UBERON:0000119,1.95e-11,309;UBERON:0000025,2.35e-11,192;UBERON:0003104,9.88e-09,160;UBERON:0009142,9.88e-09,160;UBERON:0000922,3.84e-08,592;UBERON:0010314,1.48e-07,132;UBERON:0002100,3.40e-07,199;UBERON:0003914,5.45e-07,117 | |||
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| ||
|short_description=p3@MTA3 | |short_description=p3@MTA3 | ||
}} | }} |
Latest revision as of 07:20, 17 September 2015
Short description: | p3@MTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MTA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000282366, ENST00000407270, NM_020744, uc002rsq.2, uc002rsr.2_5end |
EntrezGene: | MTA3 |
HGNC: | 23784 |
UniProt: | F8W8M8Q9BTC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.12e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 4.57e-13 | 240 |
epithelium | 6.16e-12 | 306 |
organ system subdivision | 8.79e-12 | 223 |
cell layer | 1.95e-11 | 309 |
tube | 2.35e-11 | 192 |
mesenchyme | 9.88e-09 | 160 |
entire embryonic mesenchyme | 9.88e-09 | 160 |
embryo | 3.84e-08 | 592 |
structure with developmental contribution from neural crest | 1.48e-07 | 132 |
trunk | 3.40e-07 | 199 |
epithelial tube | 5.45e-07 | 117 |